BAC Information

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BAC

Clone NameB6Ng01-149O10
Chromosome16 (Build37)
Map Location 42,036,021 - 42,037,001
singlet/doubletsinglet
Overlap geneLsamp
Upstream geneEG667450
Downstream geneGap43, BC002163
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-149O10.bB6Ng01-149O10.g
ACCDH946114DH946115
length1,2201,003
definitionDH946114|Mus musculus domesticus DNA, BAC clone: B6Ng01-149O10, 5' end.DH946115|Mus musculus domesticus DNA, BAC clone: B6Ng01-149O10, 3' end.
singlet/doublet---singlet
BLAST hitno hit dataunique
sequence
gaattcaaggcccttacctaaccatgataaaagcaatctacagcaaacca
gtagccaacatcaaagtaaatgatgagaagctggaagcaatcccactaaa
atcagggactagacaaggctgcccactttctccctacctattcaacatag
tatttgaagtcagagccagaacaattcgacaacaaaagaagatcaaaggg
atacaaattggaaaggaagaagtcaaaatatcactttttgcagatgatat
gatagtatatataagtgaccctagaactccaccagagaactcctaaacct
gatgaacagcttcagtgaagtagctgtatatgaaattaactcaaacaagt
caatgtactttctctacataaaggataaacaggctgagaaagaaattagg
gaaacaacacccttcacaatagtcacaaataatataaaataccttggcat
gactctaactaaggaagtgaaagatctgtatgataagaacttctagtcta
tgaagaaagaaattaaagaatatctaggaagatcgaaagatctcccatgc
tcatgaattggcaggatcaatatagtaaaaatggctatcttgccaaaagc
aatctacagattcaatgcaatccccatcaaaattccaactcaattcttca
acaaattagaaagggcaatctgcaaattcatctggaataacaaaaaaaaa
acctaggatagcaaaaactcttctcaatgataaaagaacctctggtggaa
tcagacctaaagctgtactacagagcaattgtgataaaaactgcatggta
ctggtatagtgacagataagtagaccaatggaatagaattgaagacccag
aggtgaacccacatacctatggtcacttgatcttgacagggagctaaaac
catccagtggaaaaagacagcattttcacaaatggtgctggcacaactgg
ttgttatcatgtagaagaatgcgattaatccattcctatctccttgtact
aggtcagatctaagtgatcaaggatctcacataaaccagagacaggtgaa
gggttagaggactttaggaacttagtcggaaggcctctagatttgggtca
cggtaaaatcgaatgaaacgcatggctttgctgtagatcggaatagacat
ggacctctaaattgcagctcgtaggcagatctaatagagacaatgaccca
atgattggcaaaggattctc
gaattctgaaccttagtggtgaggctctgcttaacatataaaggagaaag
taatgaagatacagtgaagttagatagaatttatgatggagcctaaagag
agcctaagagcctacatttatttgcaaagcatttcatttgattttttaac
ccttttttcttttcagcatatacctacagtttctttctgcatcatgttga
caaaaagctgttttttcccccttgtgttcattttagtagaatgcattgaa
agcatatcaagttattacaaaaagaagggcaatggaacaaaaataatata
ttttaaggtatttaagtagtagcacttgtctatattcaaggtgtgctatg
cggtaatttaacataggcatacagtgtgcaatgggtatcacggttcagtt
acctagcatgcccatccctacccaaactataaactggtccttggaacctc
ttcatctagcagctgaaggtttgtactcagttgtctccctccttcgtcat
ggctaaaaagtccagtgcatgtgtgtacctcatgttcatggtcaatgcat
ctgctgatgggcatttcagtttttcccacatcttggctactgcaagtaag
aatacaatgaacagaggcacaactgtcttttcatggttagttttttatag
actctctggaaatgtactgaacagtggagtcctttgcatcacatggccgt
tctgtgtgtttattgctttgttctgagcatcccttagtttttctgtaatt
gctctaccatctcattctccctcaagcaatgtacaaaaatttattttcct
cacatatttcccaacattcatctctgtcattttaaagggagtagtctcat
taaaacaatgatgatagtccattgtagtcttatttacattcccctgatgg
gtagtatattgattatgctttcctacactgttggctgtttatatcctctt
caaaaatgacgagaccatttgttcaccctctactggttatttgctagctt
ttt
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr16_42036021_42037001
seq2: B6Ng01-149O10.g_69_1045

seq1  GAATTCTGAACCTTAGTGGTGAGGCTCTGCTTAACATATAAAGGAGAAAG  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCTGAACCTTAGTGGTGAGGCTCTGCTTAACATATAAAGGAGAAAG  50

seq1  TAATGAAGATACAGTGAAGTTAGATAGAATTTATGATGGAGCCTAAAGAG  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAATGAAGATACAGTGAAGTTAGATAGAATTTATGATGGAGCCTAAAGAG  100

seq1  AGCCTAAGAGCCTACATTTATTTGCAAAGCATTTCATTTGATTTTTTAAC  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGCCTAAGAGCCTACATTTATTTGCAAAGCATTTCATTTGATTTTTTAAC  150

seq1  CCTTTTTTCTTTTCAGCATATACCTACAGTTTCTTTCTGCATCATGTTGA  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTTTTTTCTTTTCAGCATATACCTACAGTTTCTTTCTGCATCATGTTGA  200

seq1  CAAAAAGCTGTTTTTTCCCCCTTGTGTTCATTTTAGTAGAATGCATTGAA  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAAAAAGCTGTTTTTTCCCCCTTGTGTTCATTTTAGTAGAATGCATTGAA  250

seq1  AGCATATCAAGTTATTACAAAAAGAAGGGCAATGGAACAAAAATAATATA  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGCATATCAAGTTATTACAAAAAGAAGGGCAATGGAACAAAAATAATATA  300

seq1  TTTTAAGGTATTTAAGTAGTAGCACTTGTCTATATTCAAGGTGTGCTATG  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTTAAGGTATTTAAGTAGTAGCACTTGTCTATATTCAAGGTGTGCTATG  350

seq1  CGGTAATTTAACATAGGCATACAGTGTGCAATGGGTATCACGGTTCAGTT  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CGGTAATTTAACATAGGCATACAGTGTGCAATGGGTATCACGGTTCAGTT  400

seq1  ACCTAGCATGCCCATCCCTACCCAAACTATAAACTGGTCCTTGGAACCTC  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACCTAGCATGCCCATCCCTACCCAAACTATAAACTGGTCCTTGGAACCTC  450

seq1  TTCATCTAGCAGCTGAAGGTTTGTACTCAGTTGTCTCCCTCCTTCGTCAT  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCATCTAGCAGCTGAAGGTTTGTACTCAGTTGTCTCCCTCCTTCGTCAT  500

seq1  GGCTAAAAAGTCCAGTGCATGTGTGTACCTCATGTTCATGGTCAATGCAT  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGCTAAAAAGTCCAGTGCATGTGTGTACCTCATGTTCATGGTCAATGCAT  550

seq1  CTGCTGATGGGCATTTCAGTTTTTCCCACATCTTGGCTACTGCAAGTAAG  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGCTGATGGGCATTTCAGTTTTTCCCACATCTTGGCTACTGCAAGTAAG  600

seq1  AATACAATGAACAGAGGCACAACTGTCTTTTCATGGTTAGTTTTTTATAG  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATACAATGAACAGAGGCACAACTGTCTTTTCATGGTTAGTTTTTTATAG  650

seq1  ACTCTCTGGAAATGTACTGAACAGTGGAGTCC-TTGCATCACATGGCCGT  699
      |||||||||||||||||||||||||||||||| |||||||||||||||||
seq2  ACTCTCTGGAAATGTACTGAACAGTGGAGTCCTTTGCATCACATGGCCGT  700

seq1  TCTGTGTGTTTATTGCTTTGTTCTGAGCATCCCTTAGTTTTTCTGTAATT  749
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTGTGTGTTTATTGCTTTGTTCTGAGCATCCCTTAGTTTTTCTGTAATT  750

seq1  GCTCTACCATCTCATTCTCCCTCAAGCAATGTACAAAAATTTATTTTCCT  799
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCTCTACCATCTCATTCTCCCTCAAGCAATGTACAAAAATTTATTTTCCT  800

seq1  CACATATTTCCCAACATTCATCTCTGTCATTTTAAAGGGAGTAGTCTCAT  849
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACATATTTCCCAACATTCATCTCTGTCATTTTAAAGGGAGTAGTCTCAT  850

seq1  TAAAACAATGATGATAGTCCATTGTAGTCTTAATTTACATTCCCCTGATG  899
      ||||||||||||||||||||||||||||||| ||||||||||||||||||
seq2  TAAAACAATGATGATAGTCCATTGTAGTCTT-ATTTACATTCCCCTGATG  899

seq1  GTTAGTAATATTGATTATGCTTTCCTACACCTGTTGGCTGTTTAATATCC  949
      | |||| |||||||||||||||||||||| ||||||||||||| ||||||
seq2  GGTAGT-ATATTGATTATGCTTTCCTACA-CTGTTGGCTGTTT-ATATCC  946

seq1  TCTTCAAAAAAATGACGAGACCA-TTGTTCACC  981
      |||||  |||||||||||||||| |||||||||
seq2  TCTTC--AAAAATGACGAGACCATTTGTTCACC  977