BAC Information

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BAC

Clone NameB6Ng01-150L20
Chromosome16 (Build37)
Map Location 13,814,364 - 13,895,534
singlet/doubletdoublet
Overlap geneRrn3, Ntan1, Pdxdc1
Upstream geneLOC622553, Ercc4, Gt4-1, Mkl2, Parn, LOC100043196, 3110001I22Rik, Pla2g10, A930007A09Rik, LOC622757
Downstream geneMpv17l, Ifitm7, 2900011O08Rik, 4921513D23Rik, Nde1, Myh11, 0610037P05Rik, Abcc1, Gm1758, Snai2
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-150L20.bB6Ng01-150L20.g
ACCDH946742DH946743
length9811,112
definitionDH946742|Mus musculus domesticus DNA, BAC clone: B6Ng01-150L20, 5' end.DH946743|Mus musculus domesticus DNA, BAC clone: B6Ng01-150L20, 3' end.
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(13,894,579 - 13,895,534)(13,814,364 - 13,815,480)
sequence
gaattctgaggcttaaacttgtgtcaacaagcatggcagcaagcaccttt
acccattcagcaatttgaattaatttgaaacaaggcttcgtaaggtctag
cagagactggccttgaactcctcctgctcttactacatcagccttctgag
tcctagatcacaggtgtacactaccacagctcctggggtttgttttgttt
tactctttagaagtaagcatacacagaggctgaagagatggttcagcact
taagaacacttgcagctctcacagaggacctggattccattttcagcacc
acaagacagctcacagctgcctataactccatttctaggggttccaacac
cccctgaccgccataagcacctgcattcacaaggtgcgtgcacattgtga
catttttcttttctttctttttttttttccctcttttcttttttgagaca
gtttctttttgtagccttggctgtcctagaactagctctgtagaccaggc
tggcttcaaactcatagagatccatctgcctcttcctttcaaatgctggg
attataggcttgtgccatcgccacccagcacattgtgacattttcataca
tatttatcgtttttctctgttctaacttttttcccttacccagttgtcct
cccttgtgtcctctccccctcactctcaagacccttctcgtcctccaaat
aactgcttttgtcttcaagttgcatgtacatctcagacatttaatcagat
tattttacttgggattatttatttttaagttatttgtgtaatatttatag
gtgaagactcatgccacagtacacattggagttgacaagtttgtggagtt
gattctcttctttgcatgggttctggggatagaactcgggccacatcatc
aaatggttaacacttacctctgaacatttcacaggctctttttctaggat
ttaataagagagcagaaagtcatattttgtc
gaattcctctcaaggtttttatactcctgtgtaataagactgatgcagag
ccctgaatttcattctgtctatgaatacctttttgaacaaagaaaatttt
attgatttaaaaagcttttatatgagacagacaagtccctgagttccagg
ccagccttggtggcaagtcactaggaaacttcaaggtctgtctcatcttt
attttactgtgtgcccctggctgtcctggaaatcactatattgctcaggc
tggcttcggactcagagatctatctgcttgcctccaacatttgagagcag
agagtttgcaccaccacttcccggttcaaggttcttttaactgctaactg
aaaatggaatgaaattgcatccatagatactgatgggatgccaggcttgg
aaagtagctagaatgtagaaggtatgttgacaaataagcctcttaggtta
caaaggagtttggggggaaaaaaatatccattgtgaaaatgaaagtacag
cctagctcacctggggcctccctgctcacaccaatgcaggtttcaataaa
gactcagccatgcttccgtgactactgtgttgaattttagccgcctgctc
ctaaagggagtgggatggttagaaacaggcattggttaagatgtttctca
tgctttgaacaagcctatacacttcagagaaattgcgtgctatctgggca
tggtgatacactttctgtaatttcagcatttggaggttgaagtaggaaca
tttttaagttagaaccagacatagtaagatgattttaacagctaaacatt
ttgggaagaaattagtgaagtctccttggaaaacagagaattttcttttt
cgtattgaggatgaaaaccagggtcttacacatacatgcacccagaccag
ttgtcttaggttttctgctgtgaacagacaccctgaccaagggactctta
taaaggacacattaattgggactggcttacaggtcagaagtttagtccat
tatcatcaggtggaagcatggcagcctccaagcagacaatggtgcagcag
agcttagagttctacatcttcatcctgaagcctgcttagctttatatctt
gttccagacaac
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr16_13894579_13895534
seq2: B6Ng01-150L20.b_44_997 (reverse)

seq1  TTAAATCCTAG-AAAAGAGCCTGTGAAATGGTTCAGGAGGTAAGTGTTTA  49
      ||||||||||| ||||||||||||||||| ||||| |||||||||| |||
seq2  TTAAATCCTAGAAAAAGAGCCTGTGAAAT-GTTCA-GAGGTAAGTG-TTA  47

seq1  ACCATTTGATGATGTGGCCCGAGTTCTATCCCCAGAACCCATGCAAAGAA  99
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACCATTTGATGATGTGGCCCGAGTTCTATCCCCAGAACCCATGCAAAGAA  97

seq1  GAGAATCAACTCCACAAACTTGTCAACTCCAATGTGTACTGTGGCATGAG  149
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGAATCAACTCCACAAACTTGTCAACTCCAATGTGTACTGTGGCATGAG  147

seq1  TCTTCACCTATAAATATTACACAAATAACTTAAAAATAAATAATCCCAAG  199
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTTCACCTATAAATATTACACAAATAACTTAAAAATAAATAATCCCAAG  197

seq1  TAAAATAATCTGATTAAATGTCTGAGATGTACATGCAACTTGAAGACAAA  249
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAAAATAATCTGATTAAATGTCTGAGATGTACATGCAACTTGAAGACAAA  247

seq1  AGCAGTTATTTGGAGGACGAGAAGGGTCTTGAGAGTGAGGGGGAGAGGAC  299
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGCAGTTATTTGGAGGACGAGAAGGGTCTTGAGAGTGAGGGGGAGAGGAC  297

seq1  ACAAGGGAGGACAACTGGGTAAGGGAAAAAAGTTAGAACAGAGAAAAACG  349
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACAAGGGAGGACAACTGGGTAAGGGAAAAAAGTTAGAACAGAGAAAAACG  347

seq1  ATAAATATGTATGAAAATGTCACAATGTGCTGGGTGGCGATGGCACAAGC  399
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATAAATATGTATGAAAATGTCACAATGTGCTGGGTGGCGATGGCACAAGC  397

seq1  CTATAATCCCAGCATTTGAAAGGAAGAGGCAGATGGATCTCTATGAGTTT  449
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTATAATCCCAGCATTTGAAAGGAAGAGGCAGATGGATCTCTATGAGTTT  447

seq1  GAAGCCAGCCTGGTCTACAGAGCTAGTTCTAGGACAGCCAAGGCTACAAA  499
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAAGCCAGCCTGGTCTACAGAGCTAGTTCTAGGACAGCCAAGGCTACAAA  497

seq1  AAGAAACTGTCTCAAAAAAGAAAAGAGGGAAAAAAAAAAAGAAAGAAAAG  549
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGAAACTGTCTCAAAAAAGAAAAGAGGGAAAAAAAAAAAGAAAGAAAAG  547

seq1  AAAAATGTCACAATGTGCACGCACCTTGTGAATGCAGGTGCTTATGGCGG  599
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAAATGTCACAATGTGCACGCACCTTGTGAATGCAGGTGCTTATGGCGG  597

seq1  TCAGGGGGTGTTGGAACCCCTAGAAATGGAGTTATAGGCAGCTGTGAGCT  649
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCAGGGGGTGTTGGAACCCCTAGAAATGGAGTTATAGGCAGCTGTGAGCT  647

seq1  GTCTTGTGGTGCTGAAAATGGAATCCAGGTCCTCTGTGAGAGCTGCAAGT  699
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTCTTGTGGTGCTGAAAATGGAATCCAGGTCCTCTGTGAGAGCTGCAAGT  697

seq1  GTTCTTAAGTGCTGAACCATCTCTTCAGCCTCTGTGTATGCTTACTTCTA  749
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTCTTAAGTGCTGAACCATCTCTTCAGCCTCTGTGTATGCTTACTTCTA  747

seq1  AAGAGTAAAACAAAACAAACCCCAGGAGCTGTGGTAGTGTACACCTGTGA  799
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGAGTAAAACAAAACAAACCCCAGGAGCTGTGGTAGTGTACACCTGTGA  797

seq1  TCTAGGACTCAGAAGGCTGATGTAGTAAGAGCAGGAGGAGTTCAAGGCCA  849
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTAGGACTCAGAAGGCTGATGTAGTAAGAGCAGGAGGAGTTCAAGGCCA  847

seq1  GTCTCTGCTAGACCTTACGAAGCCTTGTTTCAAATTAATTCAAATTGCTG  899
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTCTCTGCTAGACCTTACGAAGCCTTGTTTCAAATTAATTCAAATTGCTG  897

seq1  AATGGGTAAAGGTGCTTGCTGCCATGCTTGTTGACACAAGTTTAAGCCTC  949
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATGGGTAAAGGTGCTTGCTGCCATGCTTGTTGACACAAGTTTAAGCCTC  947

seq1  AGAATTC  956
      |||||||
seq2  AGAATTC  954

seq1: chr16_13814364_13815480
seq2: B6Ng01-150L20.g_68_1179

seq1  GAATTCCTCTCAAGGTTTTTATACTCCTGTGTAATAAGACTGATGCAGAG  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCCTCTCAAGGTTTTTATACTCCTGTGTAATAAGACTGATGCAGAG  50

seq1  CCCTGAATTTCATTCTGTCTATGAATACCTTTTTGAACAAAGAAAATTTT  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCCTGAATTTCATTCTGTCTATGAATACCTTTTTGAACAAAGAAAATTTT  100

seq1  ATTGATTTAAAAAGCTTTTATATGAGACAGACAAGTCCCTGAGTTCCAGG  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTGATTTAAAAAGCTTTTATATGAGACAGACAAGTCCCTGAGTTCCAGG  150

seq1  CCAGCCTTGGTGGCAAGTCACTAGGAAACTTCAAGGTCTGTCTCATCTTT  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCAGCCTTGGTGGCAAGTCACTAGGAAACTTCAAGGTCTGTCTCATCTTT  200

seq1  ATTTTACTGTGTGCCCCTGGCTGTCCTGGAAATCACTATATTGCTCAGGC  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTTTACTGTGTGCCCCTGGCTGTCCTGGAAATCACTATATTGCTCAGGC  250

seq1  TGGCTTCGGACTCAGAGATCTATCTGCTTGCCTCCAACATTTGAGAGCAG  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGCTTCGGACTCAGAGATCTATCTGCTTGCCTCCAACATTTGAGAGCAG  300

seq1  AGAGTTTGCACCACCACTTCCCGGTTCAAGGTTCTTTTAACTGCTAACTG  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAGTTTGCACCACCACTTCCCGGTTCAAGGTTCTTTTAACTGCTAACTG  350

seq1  AAAATGGAATGAAATTGCATCCATAGATACTGATGGGATGCCAGGCTTGG  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAATGGAATGAAATTGCATCCATAGATACTGATGGGATGCCAGGCTTGG  400

seq1  AAAGTAGCTAGAATGTAGAAGGTATGTTGACAAATAAGCCTCTTAGGTTA  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAGTAGCTAGAATGTAGAAGGTATGTTGACAAATAAGCCTCTTAGGTTA  450

seq1  CAAAGGAGTTTGGGGGGAAAAAAATATCCATTGTGAAAATGAAAGTACAG  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAAAGGAGTTTGGGGGGAAAAAAATATCCATTGTGAAAATGAAAGTACAG  500

seq1  CCTAGCTCACCTGGGGCCTCCCTGCTCACACCAATGCAGGTTTCAATAAA  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTAGCTCACCTGGGGCCTCCCTGCTCACACCAATGCAGGTTTCAATAAA  550

seq1  GACTCAGCCATGCTTCCGTGACTACTGTGTTGAATTTTAGCCGCCTGCTC  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GACTCAGCCATGCTTCCGTGACTACTGTGTTGAATTTTAGCCGCCTGCTC  600

seq1  CTAAAGGGAGTGGGATGGTTAGAAACAGGCATTGGTTAAGATGTTTCTCA  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTAAAGGGAGTGGGATGGTTAGAAACAGGCATTGGTTAAGATGTTTCTCA  650

seq1  TGCTTTGAACAAGCCTATACACTTCAGAGAAATTGCGTGCTATCTGGGCA  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGCTTTGAACAAGCCTATACACTTCAGAGAAATTGCGTGCTATCTGGGCA  700

seq1  TGGTGATACACTTTCTGTAATTTCAGCATTTGGAGGTTGAAGTAGGAACA  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGTGATACACTTTCTGTAATTTCAGCATTTGGAGGTTGAAGTAGGAACA  750

seq1  TTTTTAAGTTAGAACCAGACATAGTAAGATGATTTTAACAGCTAAACATT  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTTTAAGTTAGAACCAGACATAGTAAGATGATTTTAACAGCTAAACATT  800

seq1  TTGGGAAGAAATTAGTGAAGTCTCCTTGGAAAACAGAGAATTTTCTTTTT  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGGGAAGAAATTAGTGAAGTCTCCTTGGAAAACAGAGAATTTTCTTTTT  850

seq1  CGTATTGAGGATGAAAACCAGGGTCTTACACATACATGCACCCAGACCAG  900
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CGTATTGAGGATGAAAACCAGGGTCTTACACATACATGCACCCAGACCAG  900

seq1  TTGTCTTAGGGTTTTTCTGCTGTGAACAGACACCCTGACCAAGGGGACTC  950
      ||||||||||  |||||||||||||||||||||||||||||| |||||||
seq2  TTGTCTTAGG--TTTTCTGCTGTGAACAGACACCCTGACCAA-GGGACTC  947

seq1  TTATAAAGGACAACATTTAATTGGGACTGGCTTACAGGTTCAGAAGTTTA  1000
      ||||||||||| ||| |||||||||||||||||||||| |||||||||||
seq2  TTATAAAGGAC-ACA-TTAATTGGGACTGGCTTACAGG-TCAGAAGTTTA  994

seq1  GTCCATTATCATCAAGGTGGGAAGCATGGCAGCCTCCAAGCAGAC-ATGG  1049
      ||||||||||||| |||| |||||||||||||||||||||||||| ||||
seq2  GTCCATTATCATC-AGGT-GGAAGCATGGCAGCCTCCAAGCAGACAATGG  1042

seq1  TGCAGGCAGAGCTAAGAGTTCTACATCTTCAT-CTGAAGGCTGC-TAGCT  1097
      |||| |||||||| |||||||||||||||||| |||||| |||| |||||
seq2  TGCA-GCAGAGCTTAGAGTTCTACATCTTCATCCTGAAGCCTGCTTAGCT  1091

seq1  TAATA-CTTGTTCCAGACAAC  1117
      | ||| |||||||||||||||
seq2  TTATATCTTGTTCCAGACAAC  1112