BAC Information

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BAC

Clone NameB6Ng01-155C18
Chromosome16 (Build37)
Map Location 63,263,437 - 63,351,987
singlet/doubletdoublet
Overlap genenone
Upstream geneLOC100043806, Nsun3, Arl13b, Stx19, Pros1
Downstream geneEpha3, LOC100043540
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-155C18.bB6Ng01-155C18.g
ACCDH950026DH950027
length1,1681,163
definitionDH950026|Mus musculus domesticus DNA, BAC clone: B6Ng01-155C18, 5' end.DH950027|Mus musculus domesticus DNA, BAC clone: B6Ng01-155C18, 3' end.
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(63,350,798 - 63,351,987)(63,263,437 - 63,264,610)
sequence
gaattctgtaaggacccggaagagccggcatcttcgtgccaaaaaggcaa
gtattttcaacttttgaatgcatgcttgaggtttcttgggcaaaagagta
ggcctcattgagagaaaagggctgatgagaaacatataaagttaaacttt
ctgaataataatattagatgcaggagtttcccagccatcagcactgtccc
cagggaccagtcccacctcgcagcattaatattcattaggtgcaacacca
tatgctgcacagcagggtgcattgccaacagactgtttgtcataaagcca
gatttaataaagcattgtaaaacaaacattatgatgacaaatacaaaatg
acaggctaattaagagaatcttaattgctatttgtccataatagcattcg
caaagtcttagctgtctttatgcttgcattcttcttgttcgggcgttcct
cctgtgtaccttccctattaaatggctcttggagagaatggttccacatg
tgatttaaaacatctaatgcaatgcgtcgttgctctctcccctccagaat
caattatatgttaatgaatagctgtgtgccatccatgctcacaaacatta
gccttcaatcctgaaggcaagaaaggacctccatggagtttgcatcctca
cctccaggtgaacttatattcatttcaatgccaacttcaagtatcacttg
tattcttgacgaattatttggagtctgccgttttctagtatgtaagaagt
ctgtcctgaatttcagaactcatcggtactttctagaaggaaaactataa
tacattgcatttcagacaacgcactagactgttcctggcttcacatcaca
attctaatcagagcgtccctactcttcacccaaggactgggtaacatgat
cttctgttttacagtatcattcttagaagatgattctctcacatgtagta
atttgaaaagtatttttctgttctatttaaatagcatttaatatggaggg
attttgctgtgtgttgtttgctagagctcaaaatagaatcaaataggatg
tcatgtaaatatttaactgaaaatagactagcatatcagctgctagtgga
ggcattattttctgagattaaagcaccgttcatgaccttagtagatgatt
gccctctggatggctgga
gaattcagatgtaaatatttttttttcctttgttggaaagaaatgagata
cttaaaaataaggtttccctaaatcatttcaagagaacattcaactaagg
ataaaatcgctgaagtattgtaaatttttattgcctttacatgttgttcg
gtgtgtatgtgtttggtgatttaaaaaaaaatgctccgaagaaggaaagt
ttatgccctagatatcaagttcaactaccttttgccttttcttaagttga
actgcaaaattctttgatgctttcatccccactaacagttactaccctgt
ttcaaaggagaattgcaaatctgttcgatgtcatgtggaatttattagtt
acatggctaaaattgaagaacattttttaaaaattaatttattttttaca
ttccttattccattgcctgccaccctccctctaccctctgactgttccac
attttttaactctacttgcttgagcacattagttttacactttccgtgtt
tctgttttgaaaatcaaaatttatttctgaattgttactgttaaaaataa
aacctattttggctaactacagtgtgctattgttgttgttgtgttggaga
gtgtggattcttttacctcctttcatagaaatagcttgagttcttatatt
ttagctttacatttgaaatccctgataaatattattgctgtaggcaaagg
tgcatgaaacatcctatggccaataaaactgatgaggtaaatatgtgaat
tgataaagttgtttttattttctctcaagtgacctttcttttaaaaaaat
agtggcacatttttttttctctaatgacatcactggaataggagatgctt
aataaatagatatgatctcccttgtaaagcggtcatcccaggaaatataa
tataggtttctattacatatttaaggtttttgaaaaaaaaagcatctcac
taaactgtctagaaattgatacaaacacacactatgtgttagacaaaata
caggagtgctacaggacttggcttctgcggggagcctcagaatccatcac
tgcttgcattgtcaagcgtttcaatgcctgcagaatctgggaacctcaaa
gtgaaggacttctctgaccattaatcaggcgacccaatcagtttcgggaa
cgacgttttcaat
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr16_63350798_63351987
seq2: B6Ng01-155C18.b_44_1211 (reverse)

seq1  TCCAGCCAAATCAGAGGGCAACTCATCTTTACTAGGTTCACTGAAACGGT  50
      ||||||| |  |||||||||| |||||  ||||| | ||| || ||||||
seq2  TCCAGCC-ATCCAGAGGGCAA-TCATC--TACTAAGGTCA-TG-AACGGT  44

seq1  GCTATAAATACTCAG-AAATAATG-CTTCACTAGCAAGCTGGATATGCCT  98
      ||| |||   ||||| |||||||| || ||||||| |||| |||||||  
seq2  GCTTTAA--TCTCAGAAAATAATGCCTCCACTAGC-AGCT-GATATGC--  88

seq1  TAGTCTAATTTTCCAGTAAATATTTACCATGACAATCCCTATTTTGATTC  148
      |||||| ||||||   |||||||||| |||||||   |||| ||||||| 
seq2  TAGTCT-ATTTTCAGTTAAATATTTA-CATGACA--TCCTA-TTTGATT-  132

seq1  CTATTTTGAGCTCTAGCAAACAAACAACAACAGCAAAATCCCTCCATATT  198
      ||||||||||||||||||||| ||||   |||||||||||||||||||||
seq2  CTATTTTGAGCTCTAGCAAAC-AACA--CACAGCAAAATCCCTCCATATT  179

seq1  AAATGCTATTTTAAATAAGAAACAGAAAAATACTTTTCAAATTACTACAT  248
      |||||||| ||||||||   ||||||||||||||||||||||||||||||
seq2  AAATGCTA-TTTAAATA--GAACAGAAAAATACTTTTCAAATTACTACAT  226

seq1  GTGAGAGAATCATCTTCTAAGAATGATACTGTAAAACAGAAGATCATGTT  298
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTGAGAGAATCATCTTCTAAGAATGATACTGTAAAACAGAAGATCATGTT  276

seq1  ACCCAGTCCTTGGGTGAAGAGTAGGGACGCTCTGATTAGAATTGTGATGT  348
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACCCAGTCCTTGGGTGAAGAGTAGGGACGCTCTGATTAGAATTGTGATGT  326

seq1  GAAGCCAGGAACAGTCTAGTGCGTTGTCTGAAATGCAATGTATTATAGTT  398
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAAGCCAGGAACAGTCTAGTGCGTTGTCTGAAATGCAATGTATTATAGTT  376

seq1  TTCCTTCTAGAAAGTACCGATGAGTTCTGAAATTCAGGACAGACTTCTTA  448
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCCTTCTAGAAAGTACCGATGAGTTCTGAAATTCAGGACAGACTTCTTA  426

seq1  CATACTAGAAAACGGCAGACTCCAAATAATTCGTCAAGAATACAAGTGAT  498
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATACTAGAAAACGGCAGACTCCAAATAATTCGTCAAGAATACAAGTGAT  476

seq1  ACTTGAAGTTGGCATTGAAATGAATATAAGTTCACCTGGAGGTGAGGATG  548
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTTGAAGTTGGCATTGAAATGAATATAAGTTCACCTGGAGGTGAGGATG  526

seq1  CAAACTCCATGGAGGTCCTTTCTTGCCTTCAGGATTGAAGGCTAATGTTT  598
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAAACTCCATGGAGGTCCTTTCTTGCCTTCAGGATTGAAGGCTAATGTTT  576

seq1  GTGAGCATGGATGGCACACAGCTATTCATTAACATATAATTGATTCTGGA  648
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTGAGCATGGATGGCACACAGCTATTCATTAACATATAATTGATTCTGGA  626

seq1  GGGGAGAGAGCAACGACGCATTGCATTAGATGTTTTAAATCACATGTGGA  698
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGGGAGAGAGCAACGACGCATTGCATTAGATGTTTTAAATCACATGTGGA  676

seq1  ACCATTCTCTCCAAGAGCCATTTAATAGGGAAGGTACACAGGAGGAACGC  748
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACCATTCTCTCCAAGAGCCATTTAATAGGGAAGGTACACAGGAGGAACGC  726

seq1  CCGAACAAGAAGAATGCAAGCATAAAGACAGCTAAGACTTTGCGAATGCT  798
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCGAACAAGAAGAATGCAAGCATAAAGACAGCTAAGACTTTGCGAATGCT  776

seq1  ATTATGGACAAATAGCAATTAAGATTCTCTTAATTAGCCTGTCATTTTGT  848
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTATGGACAAATAGCAATTAAGATTCTCTTAATTAGCCTGTCATTTTGT  826

seq1  ATTTGTCATCATAATGTTTGTTTTACAATGCTTTATTAAATCTGGCTTTA  898
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTTGTCATCATAATGTTTGTTTTACAATGCTTTATTAAATCTGGCTTTA  876

seq1  TGACAAACAGTCTGTTGGCAATGCACCCTGCTGTGCAGCATATGGTGTTG  948
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGACAAACAGTCTGTTGGCAATGCACCCTGCTGTGCAGCATATGGTGTTG  926

seq1  CACCTAATGAATATTAATGCTGCGAGGTGGGACTGGTCCCTGGGGACAGT  998
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACCTAATGAATATTAATGCTGCGAGGTGGGACTGGTCCCTGGGGACAGT  976

seq1  GCTGATGGCTGGGAAACTCCTGCATCTAATATTATTATTCAGAAAGTTTA  1048
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCTGATGGCTGGGAAACTCCTGCATCTAATATTATTATTCAGAAAGTTTA  1026

seq1  ACTTTATATGTTTCTCATCAGCCCTTTTCTCTCAATGAGGCCTACTCTTT  1098
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTTTATATGTTTCTCATCAGCCCTTTTCTCTCAATGAGGCCTACTCTTT  1076

seq1  TGCCCAAGAAACCTCAAGCATGCATTCAAAAGTTGAAAATACTTGCCTTT  1148
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGCCCAAGAAACCTCAAGCATGCATTCAAAAGTTGAAAATACTTGCCTTT  1126

seq1  TTGGCACGAAGATGCCGGCTCTTCCGGGTCCTTACAGAATTC  1190
      ||||||||||||||||||||||||||||||||||||||||||
seq2  TTGGCACGAAGATGCCGGCTCTTCCGGGTCCTTACAGAATTC  1168

seq1: chr16_63263437_63264610
seq2: B6Ng01-155C18.g_65_1227

seq1  GAATTCAGATGTAAATATTTTTTTTTCCTTTGTTGGAAAGAAATGAGATA  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCAGATGTAAATATTTTTTTTTCCTTTGTTGGAAAGAAATGAGATA  50

seq1  CTTAAAAATAAGGTTTCCCTAAATCATTTCAAGAGAACATTCAACTAAGG  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTAAAAATAAGGTTTCCCTAAATCATTTCAAGAGAACATTCAACTAAGG  100

seq1  ATAAAATCGCTGAAGTATTGTAAATTTTTATTGCCTTTACATGTTGTTCG  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATAAAATCGCTGAAGTATTGTAAATTTTTATTGCCTTTACATGTTGTTCG  150

seq1  GTGTGTATGTGTTTGGTGATTTAAAAAAAAATGCTCCGAAGAAGGAAAGT  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTGTGTATGTGTTTGGTGATTTAAAAAAAAATGCTCCGAAGAAGGAAAGT  200

seq1  TTATGCCCTAGATATCAAGTTCAACTACCTTTTGCCTTTTCTTAAGTTGA  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTATGCCCTAGATATCAAGTTCAACTACCTTTTGCCTTTTCTTAAGTTGA  250

seq1  ACTGCAAAATTCTTTGATGCTTTCATCCCCACTAACAGTTACTACCCTGT  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTGCAAAATTCTTTGATGCTTTCATCCCCACTAACAGTTACTACCCTGT  300

seq1  TTCAAAGGAGAATTGCAAATCTGTTCGATGTCATGTGGAATTTATTAGTT  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCAAAGGAGAATTGCAAATCTGTTCGATGTCATGTGGAATTTATTAGTT  350

seq1  ACATGGCTAAAATTGAAGAACATTTTTTAAAAATTAATTTATTTTTTACA  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACATGGCTAAAATTGAAGAACATTTTTTAAAAATTAATTTATTTTTTACA  400

seq1  TTCCTTATTCCATTGCCTGCCACCCTCCCTCTACCCTCTGACTGTTCCAC  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCCTTATTCCATTGCCTGCCACCCTCCCTCTACCCTCTGACTGTTCCAC  450

seq1  ATTTTTTAACTCTACTTGCTTGAGCACATTAGTTTTACACTTTCCGTGTT  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTTTTTAACTCTACTTGCTTGAGCACATTAGTTTTACACTTTCCGTGTT  500

seq1  TCTGTTTTGAAAATCAAAATTTATTTCTGAATTGTTACTGTTAAAAATAA  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTGTTTTGAAAATCAAAATTTATTTCTGAATTGTTACTGTTAAAAATAA  550

seq1  AACCTATTTTGGCTAACTACAGTGTGCTATTGTTGTTGTTGTGTTGGAGA  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACCTATTTTGGCTAACTACAGTGTGCTATTGTTGTTGTTGTGTTGGAGA  600

seq1  GTGTGGATTCTTTTACCTCCTTTCATAGAAATAGCTTGAGTTCTTATATT  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTGTGGATTCTTTTACCTCCTTTCATAGAAATAGCTTGAGTTCTTATATT  650

seq1  TTAGCTTTACATTTGAAATCCCTGATAAATATTATTGCTGTAGGCAAAGG  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTAGCTTTACATTTGAAATCCCTGATAAATATTATTGCTGTAGGCAAAGG  700

seq1  TGCATGAAACATCCTATGGCCAATAAAACTGATGAGGTAAATATGTGAAT  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGCATGAAACATCCTATGGCCAATAAAACTGATGAGGTAAATATGTGAAT  750

seq1  TGATAAAGTTGTTTTTATTTTCTCTCAAGTGACCTTTCTTTTAAAAAAAT  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGATAAAGTTGTTTTTATTTTCTCTCAAGTGACCTTTCTTTTAAAAAAAT  800

seq1  AGTGGCACA-TTTTTTTTCTCTAATGACATCACTGGAATAGGAGATGCTT  849
      ||||||||| ||||||||||||||||||||||||||||||||||||||||
seq2  AGTGGCACATTTTTTTTTCTCTAATGACATCACTGGAATAGGAGATGCTT  850

seq1  AAT-AATAGATATGATCTCCCTTGTAAAGCGGTCATCCAAGGAAATATAA  898
      ||| |||||||||||||||||||||||||||||||||| |||||||||||
seq2  AATAAATAGATATGATCTCCCTTGTAAAGCGGTCATCCCAGGAAATATAA  900

seq1  TATAGGTTTCTATTACATATTTAAGGGTTTTTGAAAAAAAAAAGCATCTC  948
      |||||||||||||||||||||||| |||||||| ||||||||||||||||
seq2  TATAGGTTTCTATTACATATTTAA-GGTTTTTG-AAAAAAAAAGCATCTC  948

seq1  ACTAAACTGTCTAGGAAATTGATACAAACACACAGCTAATGTGTTAGGAC  998
      ||||||||||||| |||||||||||||||||||| || |||||||| |||
seq2  ACTAAACTGTCTA-GAAATTGATACAAACACACA-CT-ATGTGTTA-GAC  994

seq1  AAAATACAGGAGTGCTACAAGGACTTGGCTTCTGC-GGGAGCCTCAAGAA  1047
      |||||||||||||||||| |||||||||||||||| ||||||||| ||||
seq2  AAAATACAGGAGTGCTAC-AGGACTTGGCTTCTGCGGGGAGCCTC-AGAA  1042

seq1  TCCATCACTGCTTGCA-TGTCAAGCGTTTCATTGCCTGCAGGAAATCT-G  1095
      |||||||||||||||| |||||||||||||| |||||||||  ||||| |
seq2  TCCATCACTGCTTGCATTGTCAAGCGTTTCAATGCCTGCAG--AATCTGG  1090

seq1  GAACCTCAGAGTGAAGGACTTTCTCTGACCATTTAATCAGTGCAGCCCAT  1145
      |||||||| |||||||||| ||||||||||| |||||||| ||  |||| 
seq2  GAACCTCAAAGTGAAGGAC-TTCTCTGACCA-TTAATCAG-GCGACCCAA  1137

seq1  TCAGTCATCAGGGGAACGACGTTTTCAAT  1174
      |||||  ||  ||||||||||||||||||
seq2  TCAGT-TTC--GGGAACGACGTTTTCAAT  1163