BAC Information

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BAC

Clone NameB6Ng01-156O01
Chromosome16 (Build37)
Map Location 72,432,480 - 72,605,180
singlet/doubletdoublet
Overlap genenone
Upstream genenone
Downstream geneRobo1, LOC100039310, LOC100039318, LOC100039326
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-156O01.bB6Ng01-156O01.g
ACCDH951264DH951265
length1,1291,119
definitionDH951264|Mus musculus domesticus DNA, BAC clone: B6Ng01-156O01, 5' end.DH951265|Mus musculus domesticus DNA, BAC clone: B6Ng01-156O01, 3' end.
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(72,432,480 - 72,433,638)(72,604,035 - 72,605,180)
sequence
gaattctccttatgatattagatttcaactctcccatcttcaaagtgcca
agaggccaaataaatttatgtcttattaaagtatactatattaatattta
tctttatcatttgtcatctataaattacatttattcttttgtattgagga
gaaaatgtttgctcataggaccagcataataaaactattactttctagtt
ttgtaaatgaccagcacttgatagtgagtccaaataattcagcttatatt
gtattttccaccatttaagtctttttattccatcagcattctctcatatg
aaagtgttcatttttataagaacaagtttattagagacacagcaagatat
agcttctaaattcttataaaaagaagaccctgaagcaataaaacgtatct
atttttgcacatatcacatccatgtcagccctgtaatgctgaatatttca
attcttcagagcttcaagctaatgagagtccagtactaatattggacata
ttgagctcgtccaccaaggtctcatcctttccactgttgctttcaaactt
gacttatgtgggtttgatattcatcagtccaggtcactgctcacttaata
gaacaatgacttggaaaagtgatttaaaatattcacagaaaaaacaaaat
gtcaaaggtcctatgacttagggactctatgtgttaccaatgaatattat
gtctcagggcatttatatgtgtttgtttcatttaactttattgagatttg
attgtgtcctcattcacccatatcgaaaataacccagactttcaaccaaa
gaggctttttactcagaatatgcagatccaatataactaaagaaaatatt
ttattttcctcacaacaaaaacctttgcccaaaaatgtcttcccaatatt
ctgtaggcttagcgctaacctcagggctcagctaaaatgtgaactacctc
cgggaattccactcattcgctacactcaaagtagtagagtacgcgttcag
cacatactatgggagataaagagtattccagtcacttgtttgatcactag
gtctgaataaatgcctttctcttgtacaagcaactattctttgttactaa
ttgctttggaatggaccgcacccaagtca
gaattcaaaaatcaatagctgattctcttacaatatcatcagacattttg
atgtgaacctttagctaattacaaattaccagtaactattagaaatttta
aagaatttaaatttaaaaaatcaaagccagttctcgtgtagaagcgtaat
cattctgatcaatgggaaagctgattcacatgaaacatagggggaattct
agacatttgtctgtctcaggacacagataacacaacttccgttatcgaaa
ggaaaagcagacatcaagagtcaaagggtattcaaaagactgtcctaatt
ttaaagttaaaccgtattagtttgatataaataacattgtttcaagattg
agtctgttgattaattttaaactgttgacatttcctggtgatatggaggc
aggcttcccaaactcctttgatattgttgatacgctgactgtaagtcatc
tttttctctgaaatgaagggacaggaacggtgtcactgtgctccctgtct
ttctgccttcctttctgacattctcccccccttccctgccccaatcctcc
tttcctttctctccatccatctcttcccttcttttcttctctctattctg
aaattcggaagtgcaaatgggtgctaagtaaactcctacctaatctttgt
aatttgaacgactaatgataaggaacatcagtggaaaattcagaggacat
cttaggagggaataaacgatttttgttgaagaaaggaaaaaataacaaag
agggtttagtgacaaaactgattttaatcctcctcagacactgtgcacca
ctctgtatcaagtgctgatgtactgcctgaagagagctttctaaagcctt
gttaagtgagcagacagtttgtgatgtcctggtgtcaagggtgccccaat
ttacatatgttaaacttacttactttgctgttggtgggagtgtacatttt
ggaaggaaaaaggttctctctttcacttctgtcacagacacaatggtctc
aaatgctcagctcaaggagtgcctgactgttgtattcgattccactaaat
tggtcgtccatggactatttactttcctagttggtgaatatgaagcatta
tgttactagaaatctatta
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr16_72432480_72433638
seq2: B6Ng01-156O01.b_45_1173

seq1  GAATTCTCCTTATGATATTAGATTTCAACTCTCCCATCTTCAAAGTGCCA  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCTCCTTATGATATTAGATTTCAACTCTCCCATCTTCAAAGTGCCA  50

seq1  AGAGGCCAAATAAATTTATGTCTTATTAAAGTATACTATATTAATATTTA  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAGGCCAAATAAATTTATGTCTTATTAAAGTATACTATATTAATATTTA  100

seq1  TCTTTATCATTTGTCATCTATAAATTACATTTATTCTTTTGTATTGAGGA  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTTTATCATTTGTCATCTATAAATTACATTTATTCTTTTGTATTGAGGA  150

seq1  GAAAATGTTTGCTCATAGGACCAGCATAATAAAACTATTACTTTCTAGTT  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAAAATGTTTGCTCATAGGACCAGCATAATAAAACTATTACTTTCTAGTT  200

seq1  TTGTAAATGACCAGCACTTGATAGTGAGTCCAAATAATTCAGCTTATATT  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGTAAATGACCAGCACTTGATAGTGAGTCCAAATAATTCAGCTTATATT  250

seq1  GTATTTTCCACCATTTAAGTCTTTTTATTCCATCAGCATTCTCTCATATG  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTATTTTCCACCATTTAAGTCTTTTTATTCCATCAGCATTCTCTCATATG  300

seq1  AAAGTGTTCATTTTTATAAGAACAAGTTTATTAGAGACACAGCAAGATAT  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAGTGTTCATTTTTATAAGAACAAGTTTATTAGAGACACAGCAAGATAT  350

seq1  AGCTTCTAAATTCTTATAAAAAGAAGACCCTGAAGCAATAAAACGTATCT  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGCTTCTAAATTCTTATAAAAAGAAGACCCTGAAGCAATAAAACGTATCT  400

seq1  ATTTTTGCACATATCACATCCATGTCAGCCCTGTAATGCTGAATATTTCA  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTTTTGCACATATCACATCCATGTCAGCCCTGTAATGCTGAATATTTCA  450

seq1  ATTCTTCAGAGCTTCAAGCTAATGAGAGTCCAGTACTAATATTGGACATA  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTCTTCAGAGCTTCAAGCTAATGAGAGTCCAGTACTAATATTGGACATA  500

seq1  TTGAGCTCGTCCACCAAGGTCTCATCCTTTCCACTGTTGCTTTCAAACTT  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGAGCTCGTCCACCAAGGTCTCATCCTTTCCACTGTTGCTTTCAAACTT  550

seq1  GACTTATGTGGGTTTGATATTCATCAGTCCAGGTCACTGCTCACTTAATA  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GACTTATGTGGGTTTGATATTCATCAGTCCAGGTCACTGCTCACTTAATA  600

seq1  GAACAATGACTTGGAAAAGTGATTTAAAATATTCACAGAAAAAACAAAAT  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAACAATGACTTGGAAAAGTGATTTAAAATATTCACAGAAAAAACAAAAT  650

seq1  GTCAAAGGTCCTATGACTTAGGGACTCTATGTGTTACCAATGAATATTAT  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTCAAAGGTCCTATGACTTAGGGACTCTATGTGTTACCAATGAATATTAT  700

seq1  GTCTCAGGGCATTTATATGTGTTTGTTTCATTTAACTTTATTGAGATTTG  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTCTCAGGGCATTTATATGTGTTTGTTTCATTTAACTTTATTGAGATTTG  750

seq1  ATTGTGTCCTCATTCACCCATATCGAAAATAACCCAGACTTTCAACCAAA  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTGTGTCCTCATTCACCCATATCGAAAATAACCCAGACTTTCAACCAAA  800

seq1  GAGGCTTTTTACTCAGAATATGCAGATCCAATATAACTAAAGAAAATATT  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGGCTTTTTACTCAGAATATGCAGATCCAATATAACTAAAGAAAATATT  850

seq1  TTATTTTCCTCACAACAAAAACCTTTGCCCAAAAATGTCTTCCCAATATT  900
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTATTTTCCTCACAACAAAAACCTTTGCCCAAAAATGTCTTCCCAATATT  900

seq1  CTGTAGGCTTAGCGCTAACCTCAGGGGCTCAGCTAAAATGTGAACTACCT  950
      ||||||||||||||||||||||| ||||||||||||||||||||||||||
seq2  CTGTAGGCTTAGCGCTAACCTCA-GGGCTCAGCTAAAATGTGAACTACCT  949

seq1  CCGGGGAATTCCACTCAATTCGGCTACACTCAAAAGTAGGTAGAAGTACG  1000
      || ||||||||||||| |||| ||||||||| |||||| |||| ||||||
seq2  CC-GGGAATTCCACTC-ATTC-GCTACACTC-AAAGTA-GTAG-AGTACG  993

seq1  CGTTCAGCAACATACTAATGGGAGGATTATAGAGTATTCCAGTCAACTTG  1050
      |||||||| ||||||| |||||||   || |||||||||||||| |||||
seq2  CGTTCAGC-ACATACT-ATGGGAG--ATAAAGAGTATTCCAGTC-ACTTG  1038

seq1  TTTTGATTCCACTAAGGGTCTGAAATAAAATGCCTTTCCTCTTGTACAAA  1100
       ||||||  |||||  ||||||||   |||||||||| ||||||||||| 
seq2  -TTTGAT--CACTA--GGTCTGAA--TAAATGCCTTT-CTCTTGTACAA-  1079

seq1  GGGAAACCCATATCTTTTGTAACTAAATTGCTATTTTGAATATGACAGCA  1150
        | |||   |||  ||||| ||| ||||||  ||| ||||  ||| |||
seq2  --GCAAC---TATTCTTTGTTACT-AATTGC--TTTGGAAT-GGACCGCA  1120

seq1  CCCAAGTCA  1159
      |||||||||
seq2  CCCAAGTCA  1129

seq1: chr16_72604035_72605180
seq2: B6Ng01-156O01.g_66_1184 (reverse)

seq1  TAATAGATATTCTAGTAACATAATGCTTCACTATATCAACCAACTAGCAG  50
      |||||||| ||||||||||||||||||||   ||||  ||||||||| | 
seq2  TAATAGAT-TTCTAGTAACATAATGCTTC---ATATTCACCAACTAGGAA  46

seq1  AGTTAAAATATGGTCCCATGGGAAACCGACCAAATTTAGTGTGAAATCGA  100
      |||  |||||  || ||||||     ||||| ||||||  ||| ||||||
seq2  AGT--AAATA--GT-CCATGG----ACGACC-AATTTA--GTGGAATCGA  84

seq1  ATACAACAGTCAGGGCCACTCCTTGAGCTGAGCATTTTGAGACCATTGTG  150
      ||||||||||||||  |||||||||||||||||| |||||||||||||| 
seq2  ATACAACAGTCAGG--CACTCCTTGAGCTGAGCA-TTTGAGACCATTGT-  130

seq1  GTCTGTGACAGAAGGTGAAAGAGAGAACCTTTTTCCCTTCCAAAATTGTT  200
      ||||||||||||| |||||||||||||||||||| |||||||||||   |
seq2  GTCTGTGACAGAA-GTGAAAGAGAGAACCTTTTT-CCTTCCAAAAT--GT  176

seq1  ACACTCCCACCAACAAGCAAAGTAAGTAAGTTTTAAACATATGTAAATTG  250
      |||||||||||||| ||||||||||||||||||  |||||||||||||||
seq2  ACACTCCCACCAAC-AGCAAAGTAAGTAAGTTT--AACATATGTAAATTG  223

seq1  GGGCACCCTTGACACCAGGACATCACAAACTGTCTGCTCACTTAACAAGG  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGGCACCCTTGACACCAGGACATCACAAACTGTCTGCTCACTTAACAAGG  273

seq1  CTTTAGAAAGCTCTCTTCAGGCAGTACATCAGCACTTGATACAGAGTGGT  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTTAGAAAGCTCTCTTCAGGCAGTACATCAGCACTTGATACAGAGTGGT  323

seq1  GCACAGTGTCTGAGGAGGATTAAAATCAGTTTTGTCACTAAACCCTCTTT  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCACAGTGTCTGAGGAGGATTAAAATCAGTTTTGTCACTAAACCCTCTTT  373

seq1  GTTATTTTTTCCTTTCTTCAACAAAAATCGTTTATTCCCTCCTAAGATGT  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTATTTTTTCCTTTCTTCAACAAAAATCGTTTATTCCCTCCTAAGATGT  423

seq1  CCTCTGAATTTTCCACTGATGTTCCTTATCATTAGTCGTTCAAATTACAA  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTCTGAATTTTCCACTGATGTTCCTTATCATTAGTCGTTCAAATTACAA  473

seq1  AGATTAGGTAGGAGTTTACTTAGCACCCATTTGCACTTCCGAATTTCAGA  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGATTAGGTAGGAGTTTACTTAGCACCCATTTGCACTTCCGAATTTCAGA  523

seq1  ATAGAGAGAAGAAAAGAAGGGAAGAGATGGATGGAGAGAAAGGAAAGGAG  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATAGAGAGAAGAAAAGAAGGGAAGAGATGGATGGAGAGAAAGGAAAGGAG  573

seq1  GATTGGGGCAGGGAAGGGGGGGAGAATGTCAGAAAGGAAGGCAGAAAGAC  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GATTGGGGCAGGGAAGGGGGGGAGAATGTCAGAAAGGAAGGCAGAAAGAC  623

seq1  AGGGAGCACAGTGACACCGTTCCTGTCCCTTCATTTCAGAGAAAAAGATG  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGGAGCACAGTGACACCGTTCCTGTCCCTTCATTTCAGAGAAAAAGATG  673

seq1  ACTTACAGTCAGCGTATCAACAATATCAAAGGAGTTTGGGAAGCCTGCCT  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTTACAGTCAGCGTATCAACAATATCAAAGGAGTTTGGGAAGCCTGCCT  723

seq1  CCATATCACCAGGAAATGTCAACAGTTTAAAATTAATCAACAGACTCAAT  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCATATCACCAGGAAATGTCAACAGTTTAAAATTAATCAACAGACTCAAT  773

seq1  CTTGAAACAATGTTATTTATATCAAACTAATACGGTTTAACTTTAAAATT  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTGAAACAATGTTATTTATATCAAACTAATACGGTTTAACTTTAAAATT  823

seq1  AGGACAGTCTTTTGAATACCCTTTGACTCTTGATGTCTGCTTTTCCTTTC  900
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGACAGTCTTTTGAATACCCTTTGACTCTTGATGTCTGCTTTTCCTTTC  873

seq1  GATAACGGAAGTTGTGTTATCTGTGTCCTGAGACAGACAAATGTCTAGAA  950
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GATAACGGAAGTTGTGTTATCTGTGTCCTGAGACAGACAAATGTCTAGAA  923

seq1  TTCCCCCTATGTTTCATGTGAATCAGCTTTCCCATTGATCAGAATGATTA  1000
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCCCCCTATGTTTCATGTGAATCAGCTTTCCCATTGATCAGAATGATTA  973

seq1  CGCTTCTACACGAGAACTGGCTTTGATTTTTTAAATTTAAATTCTTTAAA  1050
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CGCTTCTACACGAGAACTGGCTTTGATTTTTTAAATTTAAATTCTTTAAA  1023

seq1  ATTTCTAATAGTTACTGGTAATTTGTAATTAGCTAAAGGTTCACATCAAA  1100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTTCTAATAGTTACTGGTAATTTGTAATTAGCTAAAGGTTCACATCAAA  1073

seq1  ATGTCTGATGATATTGTAAGAGAATCAGCTATTGATTTTTGAATTC  1146
      ||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGTCTGATGATATTGTAAGAGAATCAGCTATTGATTTTTGAATTC  1119