BAC Information

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BAC

Clone NameB6Ng01-157I18
Chromosome16 (Build37)
Map Location 6,867,145 - 7,093,279
singlet/doubletdoublet
Overlap geneA2bp1
Upstream geneLOC100042445
Downstream genenone
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-157I18.bB6Ng01-157I18.g
ACCDH951750DH951751
length1,000309
definitionDH951750|Mus musculus domesticus DNA, BAC clone: B6Ng01-157I18, 5' end.DH951751|Mus musculus domesticus DNA, BAC clone: B6Ng01-157I18, 3' end.
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(7,092,283 - 7,093,279)(6,867,145 - 6,867,453)
sequence
gaattctgccttctggacggagatttttccagtctggtctctctcaaaga
ttccaagcaatagaaatcagccattagacaaaacagacagaacctaggga
tttggattcaagccaaagctttgctacttttagactttgcacaagtaagt
ttcctggtgttccgttttcttatttacaaagatgagatatccaattgcaa
cctgcgggaggccctgtgcccataactgagataatgctctcatagtctcc
ttcccagcacagaggaagtgctgagctaacttccattcgtcttttagtag
tcagtctgccatagtaaggacaagagactataatatggcagtataaagaa
ctaagtctgctaaattatcctttagcgctcccttcaatgaatggcatgga
gctgggcagtggtgatgcacgcctttaatcccagaacttggtcggcagag
gcaagcagatttctgagttcgaggccagcctggattacagagttccagga
catccagggctacaaagagaaaccctgtctcgaaaaatgaataaataaat
aaataaataaataaataaataaataaataaataaggcatgttctgtatca
tgctacccaatacattcaacacaagccacccgtggtcttgacctcaggat
atgccaaagatgtcatttatgtataggatttttaatatttaattttaagt
aacttaatttaaataaagccatagggctgatagtcctctctatcacatgt
aattttttctagaccattctatttccccacctaaactaccataattcttt
tcctagcagccactagtactttatattgacacaagtaacaataatacaaa
atagtgatttcatttttctagagagtagtttcttctttgaatccattcca
tttttctgaatcctttaaagaaaaaaaatgttctttatttctatctatga
catggtcaacatcactctcccttcctgctctgttactgctctgttttgtg


tcatgctgctttctcacaggtttaaccctagaagggcagttatggtttga
catatgcacagtgaacttcggtgagacgcagtaagggatgaaggagagga
gagaagacaggtaggaaagaggaaaggttggtaggatgtaggacaggaaa
ggtgatagacagataggtcaatagatatagatagacagacagacagacat
cgatgatagtcagggacagactacgtacagtgcatacacacagagagaga
gagagagagagagagagagagagagagagagagagagagagagaagatag
gagaggaag
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr16_7092283_7093279
seq2: B6Ng01-157I18.b_49_1048 (reverse)

seq1  CACAAAACAGAGCAGTAACAGAGCAGGAAGGGAGAGTGATGTTGACCATG  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACAAAACAGAGCAGTAACAGAGCAGGAAGGGAGAGTGATGTTGACCATG  50

seq1  TCATAGATAAGAAATAAAGAACATTTTTTTTCTTT-AAGGATTCAGAAAA  99
      |||||||| |||||||||||||||||||||||||| ||||||||||||||
seq2  TCATAGAT-AGAAATAAAGAACATTTTTTTTCTTTAAAGGATTCAGAAAA  99

seq1  ATGGAATGGATTCAAAGAAGAAACTACTCTCTAG-AAAATG-AATCACTA  147
      |||||||||||||||||||||||||||||||||| |||||| ||||||||
seq2  ATGGAATGGATTCAAAGAAGAAACTACTCTCTAGAAAAATGAAATCACTA  149

seq1  TTTTGTATTATTGTTACTTGTGTCAATATAAAGTACTAGTGGCTGCTAGG  197
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTTGTATTATTGTTACTTGTGTCAATATAAAGTACTAGTGGCTGCTAGG  199

seq1  -AAAGAATTATGGTAGTTTAGGTGGGGAAATAGAATGGTCTAGAAAAAAT  246
       |||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAAGAATTATGGTAGTTTAGGTGGGGAAATAGAATGGTCTAGAAAAAAT  249

seq1  TACATGTGATAGAGAGGACTATCAGCCCTATGGCTTTATTTAAATTAAGT  296
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TACATGTGATAGAGAGGACTATCAGCCCTATGGCTTTATTTAAATTAAGT  299

seq1  TACTTAAAATTAAATATTAAAAATCCTATACATAAATGACATCTTTGGCA  346
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TACTTAAAATTAAATATTAAAAATCCTATACATAAATGACATCTTTGGCA  349

seq1  TATCCTGAGGTCAAGACCACGGGTGGCTTGTGTTGAATGTATTGGGTAGC  396
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATCCTGAGGTCAAGACCACGGGTGGCTTGTGTTGAATGTATTGGGTAGC  399

seq1  ATGATACAGAACATGCCTTATTTATTTATTTATTTATTTATTTATTTATT  446
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGATACAGAACATGCCTTATTTATTTATTTATTTATTTATTTATTTATT  449

seq1  TATTTATTTATTCATTTTTCGAGACAGGGTTTCTCTTTGTAGCCCTGGAT  496
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATTTATTTATTCATTTTTCGAGACAGGGTTTCTCTTTGTAGCCCTGGAT  499

seq1  GTCCTGGAACTCTGTAATCCAGGCTGGCCTCGAACTCAGAAATCTGCTTG  546
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTCCTGGAACTCTGTAATCCAGGCTGGCCTCGAACTCAGAAATCTGCTTG  549

seq1  CCTCTGCCGACCAAGTTCTGGGATTAAAGGCGTGCATCACCACTGCCCAG  596
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTCTGCCGACCAAGTTCTGGGATTAAAGGCGTGCATCACCACTGCCCAG  599

seq1  CTCCATGCCATTCATTGAAGGGAGCGCTAAAGGATAATTTAGCAGACTTA  646
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCCATGCCATTCATTGAAGGGAGCGCTAAAGGATAATTTAGCAGACTTA  649

seq1  GTTCTTTATACTGCCATATTATAGTCTCTTGTCCTTACTATGGCAGACTG  696
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTCTTTATACTGCCATATTATAGTCTCTTGTCCTTACTATGGCAGACTG  699

seq1  ACTACTAAAAGACGAATGGAAGTTAGCTCAGCACTTCCTCTGTGCTGGGA  746
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTACTAAAAGACGAATGGAAGTTAGCTCAGCACTTCCTCTGTGCTGGGA  749

seq1  AGGAGACTATGAGAGCATTATCTCAGTTATGGGCACAGGGCCTCCCGCAG  796
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGAGACTATGAGAGCATTATCTCAGTTATGGGCACAGGGCCTCCCGCAG  799

seq1  GTTGCAATTGGATATCTCATCTTTGTAAATAAGAAAACGGAACACCAGGA  846
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTGCAATTGGATATCTCATCTTTGTAAATAAGAAAACGGAACACCAGGA  849

seq1  AACTTACTTGTGCAAAGTCTAAAAGTAGCAAAGCTTTGGCTTGAATCCAA  896
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACTTACTTGTGCAAAGTCTAAAAGTAGCAAAGCTTTGGCTTGAATCCAA  899

seq1  ATCCCTAGGTTCTGTCTGTTTTGTCTAATGGCTGATTTCTATTGCTTGGA  946
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATCCCTAGGTTCTGTCTGTTTTGTCTAATGGCTGATTTCTATTGCTTGGA  949

seq1  ATCTTTGAGAGAGACCAGACTGGAAAAATCTCCGTCCAGAAGGCAGAATT  996
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATCTTTGAGAGAGACCAGACTGGAAAAATCTCCGTCCAGAAGGCAGAATT  999

seq1  C  997
      |
seq2  C  1000


seq1: chr16_6867145_6867453
seq2: B6Ng01-157I18.g_74_382

seq1  TCATGCTGCTTTCTCACAGGTTTAACCCTAGAAGGGCAGTTATGGTTTGA  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCATGCTGCTTTCTCACAGGTTTAACCCTAGAAGGGCAGTTATGGTTTGA  50

seq1  CATATGCACAGTGAACTTCGGTGAGACGCAGTAAGGGATGAAGGAGAGGA  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATATGCACAGTGAACTTCGGTGAGACGCAGTAAGGGATGAAGGAGAGGA  100

seq1  GAGAAGACAGGTAGGAAAGAGGAAAGGTTGGTAGGATGTAGGACAGGAAA  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGAAGACAGGTAGGAAAGAGGAAAGGTTGGTAGGATGTAGGACAGGAAA  150

seq1  GGTGATAGACAGATAGGTCAATAGATATAGATAGACAGACAGACAGACAT  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGTGATAGACAGATAGGTCAATAGATATAGATAGACAGACAGACAGACAT  200

seq1  CGATGATAGTCAGGGACAGACTACGTACAGTGCATACACACAGAGAGAGA  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CGATGATAGTCAGGGACAGACTACGTACAGTGCATACACACAGAGAGAGA  250

seq1  GAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAAGATAG  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAAGATAG  300

seq1  GAGAGGAAG  309
      |||||||||
seq2  GAGAGGAAG  309


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