BAC Information

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BAC

Clone NameB6Ng01-159F22
Chromosome16 (Build37)
Map Location 43,274,988 - 43,427,224
singlet/doubletdoublet
Overlap geneLOC667484
Upstream geneGap43, BC002163
Downstream geneZbtb20, LOC100043314, Drd3, Qtrtd1, 2610015P09Rik, Zdhhc23, Gramd1c, Atp6v1a, Nat13, Gm608, Sidt1, Ccdc52, Wdr52
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-159F22.bB6Ng01-159F22.g
ACCDH953051DH953052
length1,0921,132
definitionDH953051|Mus musculus domesticus DNA, BAC clone: B6Ng01-159F22, 5' end.DH953052|Mus musculus domesticus DNA, BAC clone: B6Ng01-159F22, 3' end.
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(43,426,135 - 43,427,224)(43,274,988 - 43,276,136)
sequence
gaattcattgcactggggaattagtgtgttgggctgtctgggatggtgtg
tgcagtgaggacggaggtgggaagaaggatttttcataggaaagcaacta
attcagcttgtagaatgaaaaggaaagagctgcccctgtaaacagtcatc
tcatttctggaccaccagacaggcacacaaaagatacatgtgttctacct
acttgttttcttgcctctggtgtgaggtgcatagtaggtatgtctttgtt
gaagcatatccactaagaataacagcaaagatacaagtactaattctgtg
gggatattgattagttaatactttaaagacagtcaggaattgtctctggg
agttgtacaatacagacaagtgataaagaaaccatagaaggaatcatata
gcaagtatgaattagaactaacaacaaaactggaaacaaaaaacctcaca
catttgacctaaaaattattttttcagagtcttaatggcttcttaagtca
attcgatgatgtgtaggatggggattctttgaaaacagagggacaactgg
accaatgtgctgaacatcacatggaggactcaaaattacactcacagatg
caagtcagcgcccatttctgtaatttggaacaaggagcccgcctttgtga
tacttcagtttcggaataactactatggtgatttaggacgtccaggtttt
tgttagcatgatacaaactagagtcatctggggagagggaacctcaagtg
aggaattcctccatcagatagatgggagagtggacctctcttgactgctg
gtggatatgggactgtgggcactgccagtcctgggcaggtttacataaga
agggcagctgagcaaggcaggtgaaacaaaccagtcagcagcaagcatcc
atggagtcagttcctgctgggtttcaatgctgagctataagctcatatta
acttttactccacagatgctttggggtcgggtttaatcatagcaacagga
ttcaactagggtactgttaaacttttaagctatatgagcttctctaggga
atagctgtataccgcatgaataacaacattaacaacaaacaa
gaattccaagataacaagaaacagaaatcctgtttaaaaaaaaaaaagga
aagcaaagaataataatctttacttctttttgtggcatagctcatctaag
agtttgggatccttttgatggcttatttgggcagtgtttggctttaggca
gccttgagctgttttgtggtaccagtgactagatgtgttgataacatttt
taaggggactatttctcttcctgagccacaaatgaacttaagctatagtt
atagacagcagaagacaagatactacaagagaatattgtgttctctttgg
gaaaaaaaaagtctccatgttgttgtggttgttttccccttggagctggg
attccatctggcactgaaaacatattgaggctacttcctctcactcggga
atgtcttcatccttacttcatgccatagtgtatatctcaaggatcaattt
ctacaagaacctgagtagaataatgaataagtgaggtagacctatgaaag
actacgtgagtgtttcatgttcagtatggaggtccctgtgaaatcctgta
atgaagacactctatcctcactgtattttgacacagtaactgggatatat
acttgtctagggcatatataaaatgtttctgggaaatttatgggagaaag
catgatgagtctctgttttgaagtaggtagtacattttgccatgagatat
gataggtaactcataagcttcaagttaaaccagagctaggtttttagagt
ttctgtttcagcctgcacttgaaagtcataaagttaaacatcgaaactca
gatctctcagaagtaccgtctcataattgattgtttggccaaatgtgacc
tgattaactcggtaagcacatgagaatgactgagagcacaatctttaaat
aagatgagacttcaatggattgtatgtgccaaataaggtgttcagaaaac
tggaagagggttctcccagagatagtcacagtgcttcagaaaggatggtg
gctacgtgtggatttctttgctgaaaactgaaggagaatgaaagagcctg
tggtacacagggttggacacgagtgagcatggggacggcacataaaggct
gatacaatgctccggggcaaggctggagtggg
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr16_43426135_43427224
seq2: B6Ng01-159F22.b_48_1139 (reverse)

seq1  TTGTTTGT--------TTGTTATTCATGCTGTATACAGCTTATTTCCTAA  42
      ||||||||        ||||||||||||| ||||||||| |||| ||| |
seq2  TTGTTTGTTGTTAATGTTGTTATTCATGCGGTATACAGC-TATTCCCT-A  48

seq1  GAG-AGCTCATATTAGC-TAAAAGTTTTACAGTTACCCTAGTTTGAATCC  90
      ||| |||||||| |||| ||||||||| |||| |||||||| |||||| |
seq2  GAGAAGCTCATA-TAGCTTAAAAGTTTAACAG-TACCCTAG-TTGAAT-C  94

seq1  CTGTTGCTATGATTAAACACTGACCCAAAGCATCTTGTGGAGTAAGAGTT  140
      |||||||||||||||||| |   ||||||||||| |||||||||| ||||
seq2  CTGTTGCTATGATTAAACCCGACCCCAAAGCATC-TGTGGAGTAAAAGTT  143

seq1  AATATGAGCTTATAGCTCAGCATTGAAACCCAGCAGGAACTGACTCCATG  190
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATATGAGCTTATAGCTCAGCATTGAAACCCAGCAGGAACTGACTCCATG  193

seq1  GATGCTTGCTGCTGACTGGTTTGTTTCACCCTGCCTTGCTCAGCTGCCCT  240
      |||||||||||||||||||||||||||| |||||||||||||||||||||
seq2  GATGCTTGCTGCTGACTGGTTTGTTTCA-CCTGCCTTGCTCAGCTGCCCT  242

seq1  TCTTATGTAAACCTGCCCAGGACTGGCAGTGCCCACAGTCCCATATCCAC  290
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTTATGTAAACCTGCCCAGGACTGGCAGTGCCCACAGTCCCATATCCAC  292

seq1  CAGCAGTCAAGAGAGGTCCACTCTCCCATCTATCTGATGGAGGAATTCCT  340
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGCAGTCAAGAGAGGTCCACTCTCCCATCTATCTGATGGAGGAATTCCT  342

seq1  CACTTGAGGTTCCCTCTCCCCAGATGACTCTAGTTTGTATCATGCTAACA  390
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACTTGAGGTTCCCTCTCCCCAGATGACTCTAGTTTGTATCATGCTAACA  392

seq1  AAAACCTGGACGTCCTAAATCACCATAGTAGTTATTCCGAAACTGAAGTA  440
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAACCTGGACGTCCTAAATCACCATAGTAGTTATTCCGAAACTGAAGTA  442

seq1  TCACAAAGGCGGGCTCCTTGTTCCAAATTACAGAAATGGGCGCTGACTTG  490
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCACAAAGGCGGGCTCCTTGTTCCAAATTACAGAAATGGGCGCTGACTTG  492

seq1  CATCTGTGAGTGTAATTTTGAGTCCTCCATGTGATGTTCAGCACATTGGT  540
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATCTGTGAGTGTAATTTTGAGTCCTCCATGTGATGTTCAGCACATTGGT  542

seq1  CCAGTTGTCCCTCTGTTTTCAAAGAATCCCCATCCTACACATCATCGAAT  590
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCAGTTGTCCCTCTGTTTTCAAAGAATCCCCATCCTACACATCATCGAAT  592

seq1  TGACTTAAGAAGCCATTAAGACTCTGAAAAAATAATTTTTAGGTCAAATG  640
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGACTTAAGAAGCCATTAAGACTCTGAAAAAATAATTTTTAGGTCAAATG  642

seq1  TGTGAGGTTTTTTGTTTCCAGTTTTGTTGTTAGTTCTAATTCATACTTGC  690
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTGAGGTTTTTTGTTTCCAGTTTTGTTGTTAGTTCTAATTCATACTTGC  692

seq1  TATATGATTCCTTCTATGGTTTCTTTATCACTTGTCTGTATTGTACAACT  740
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATATGATTCCTTCTATGGTTTCTTTATCACTTGTCTGTATTGTACAACT  742

seq1  CCCAGAGACAATTCCTGACTGTCTTTAAAGTATTAACTAATCAATATCCC  790
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCCAGAGACAATTCCTGACTGTCTTTAAAGTATTAACTAATCAATATCCC  792

seq1  CACAGAATTAGTACTTGTATCTTTGCTGTTATTCTTAGTGGATATGCTTC  840
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACAGAATTAGTACTTGTATCTTTGCTGTTATTCTTAGTGGATATGCTTC  842

seq1  AACAAAGACATACCTACTATGCACCTCACACCAGAGGCAAGAAAACAAGT  890
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACAAAGACATACCTACTATGCACCTCACACCAGAGGCAAGAAAACAAGT  892

seq1  AGGTAGAACACATGTATCTTTTGTGTGCCTGTCTGGTGGTCCAGAAATGA  940
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGTAGAACACATGTATCTTTTGTGTGCCTGTCTGGTGGTCCAGAAATGA  942

seq1  GATGACTGTTTACAGGGGCAGCTCTTTCCTTTTCATTCTACAAGCTGAAT  990
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GATGACTGTTTACAGGGGCAGCTCTTTCCTTTTCATTCTACAAGCTGAAT  992

seq1  TAGTTGCTTTCCTATGAAAAATCCTTCTTCCCACCTCCGTCCTCACTGCA  1040
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAGTTGCTTTCCTATGAAAAATCCTTCTTCCCACCTCCGTCCTCACTGCA  1042

seq1  CACACCATCCCAGACAGCCCAACACACTAATTCCCCAGTGCAATGAATTC  1090
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACACCATCCCAGACAGCCCAACACACTAATTCCCCAGTGCAATGAATTC  1092

seq1: chr16_43274988_43276136
seq2: B6Ng01-159F22.g_66_1197

seq1  GAATTCCAAGATAACAAGAAACAGAAATCCTGTTTAAAAAAAAAAAAGGA  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCCAAGATAACAAGAAACAGAAATCCTGTTTAAAAAAAAAAAAGGA  50

seq1  AAGCAAAGAATAATAATCTTTACTTCTTTTTGTGGCATAGCTCATCTAAG  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGCAAAGAATAATAATCTTTACTTCTTTTTGTGGCATAGCTCATCTAAG  100

seq1  AGTTTGGGATCCTTTTGATGGCTTATTTGGGCAGTGTTTGGCTTTAGGCA  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTTTGGGATCCTTTTGATGGCTTATTTGGGCAGTGTTTGGCTTTAGGCA  150

seq1  GCCTTGAGCTGTTTTGTGGTACCAGTGACTAGATGTGTTGATAACATTTT  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCCTTGAGCTGTTTTGTGGTACCAGTGACTAGATGTGTTGATAACATTTT  200

seq1  TAAGGGGACTATTTCTCTTCCTGAGCCACAAATGAACTTAAGCTATAGTT  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAAGGGGACTATTTCTCTTCCTGAGCCACAAATGAACTTAAGCTATAGTT  250

seq1  ATAGACAGCAGAAGACAAGATACTACAAGAGAATATTGTGTTCTCTTTGG  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATAGACAGCAGAAGACAAGATACTACAAGAGAATATTGTGTTCTCTTTGG  300

seq1  GAAAAAAAAAGTCTCCATGTTGTTGTGGTTGTTTTCCCCTTGGAGCTGGG  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAAAAAAAAAGTCTCCATGTTGTTGTGGTTGTTTTCCCCTTGGAGCTGGG  350

seq1  ATTCCATCTGGCACTGAAAACATATTGAGGCTACTTCCTCTCACTCGGGA  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTCCATCTGGCACTGAAAACATATTGAGGCTACTTCCTCTCACTCGGGA  400

seq1  ATGTCTTCATCCTTACTTCATGCCATAGTGTATATCTCAAGGATCAATTT  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGTCTTCATCCTTACTTCATGCCATAGTGTATATCTCAAGGATCAATTT  450

seq1  CTACAAGAACCTGAGTAGAATAATGAATAAGTGAGGTAGACCTATGAAAG  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTACAAGAACCTGAGTAGAATAATGAATAAGTGAGGTAGACCTATGAAAG  500

seq1  ACTACGTGAGTGTTTCATGTTCAGTATGGAGGTCCCTGTGAAATCCTGTA  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTACGTGAGTGTTTCATGTTCAGTATGGAGGTCCCTGTGAAATCCTGTA  550

seq1  ATGAAGACACTCTATCCTCACTGTATTTTGACACAGTAACTGGGATATAT  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGAAGACACTCTATCCTCACTGTATTTTGACACAGTAACTGGGATATAT  600

seq1  ACTTGTCTAGGGCATATATAAAATGTTTCTGGGAAATTTAT-GGAGAAAG  649
      ||||||||||||||||||||||||||||||||||||||||| ||||||||
seq2  ACTTGTCTAGGGCATATATAAAATGTTTCTGGGAAATTTATGGGAGAAAG  650

seq1  CATGATGAGTCTCTGTTTTGAAGTAGGTAGTACATTTTGCCATGAGATAT  699
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATGATGAGTCTCTGTTTTGAAGTAGGTAGTACATTTTGCCATGAGATAT  700

seq1  GATAGGTAACTCATAAGCTTCAAGTTAAACCAGAGCTAGGTTTTTAGAGT  749
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GATAGGTAACTCATAAGCTTCAAGTTAAACCAGAGCTAGGTTTTTAGAGT  750

seq1  TTCTGTTTCAGCCTGCACTTGAAAGTCATAAAGTTAAACATCGAAAACTC  799
      ||||||||||||||||||||||||||||||||||||||||||| ||||||
seq2  TTCTGTTTCAGCCTGCACTTGAAAGTCATAAAGTTAAACATCG-AAACTC  799

seq1  AGATCTCTCAGAAGTACCGTCTCATAATTGATTGTTTGGCCAAATGTGAC  849
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGATCTCTCAGAAGTACCGTCTCATAATTGATTGTTTGGCCAAATGTGAC  849

seq1  CTGATTAACTCGGTAAGCAACATGAGAATGAACTGAGAGCAACAATCTTT  899
      |||||||||||||||||| ||||||||||| ||||||||| |||||||||
seq2  CTGATTAACTCGGTAAGC-ACATGAGAATG-ACTGAGAGC-ACAATCTTT  896

seq1  AAATAAGATGAGACTTCAATGGATTGTATGTGCCAAATAAGGTG-TCAGA  948
      |||||||||||||||||||||||||||||||||||||||||||| |||| 
seq2  AAATAAGATGAGACTTCAATGGATTGTATGTGCCAAATAAGGTGTTCAG-  945

seq1  AAAACTGGGAAGAGGG-TCTCCCAGAAGATAGCCACAGTGCTTCAAGAAA  997
      |||||| ||||||||| |||||||| |||||| ||||||||||| |||||
seq2  AAAACT-GGAAGAGGGTTCTCCCAG-AGATAGTCACAGTGCTTC-AGAAA  992

seq1  GGGGATGTTGCTAACAGTGT-GATTTCTTTGCTGAAAAGCTGAGGGAG-A  1045
        ||||| ||   || |||| ||||||||||||||||| |||| |||| |
seq2  --GGATGGTGGCTAC-GTGTGGATTTCTTTGCTGAAAA-CTGAAGGAGAA  1038

seq1  TGAGAAGAGCCATGT-GACCAGAGGGTTTGACAGGAGTGAGCATGGTGGA  1094
      ||| ||||||| ||| |  || |||||| |||| |||||||||||| |||
seq2  TGA-AAGAGCC-TGTGGTACACAGGGTTGGACACGAGTGAGCATGG-GGA  1085

seq1  GCGTGCATAGCATAAAAGGCTGATCACAATGC-CTGGGGCAAGGCTGGGA  1143
       || |||   ||| |||||||||| ||||||| | |||||||||||||  
seq2  -CG-GCA---CAT-AAAGGCTGAT-ACAATGCTCCGGGGCAAGGCTGG--  1126

seq1  AGTGGG  1149
      ||||||
seq2  AGTGGG  1132