BAC Information

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BAC

Clone NameB6Ng01-163J15
Chromosome16 (Build37)
Map Location 82,315,878 - 82,316,856
singlet/doubletsinglet
Overlap genenone
Upstream geneNcam2, LOC621470, LOC435484, Pgk1-ps1
Downstream geneEG665260
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-163J15.bB6Ng01-163J15.g
ACCDH956146DH956147
length1,073657
definitionDH956146|Mus musculus domesticus DNA, BAC clone: B6Ng01-163J15, 5' end.DH956147|Mus musculus domesticus DNA, BAC clone: B6Ng01-163J15, 3' end.
singlet/doubletsinglet---
BLAST hituniqueno hit data
sequence
gaattccacataaaaccagagacactgaaacttatagaggagaaagtgga
gaagagcttcaaagataagggcacaggagaaaaaaaaatccggaacagaa
catcaatggcttgtgctgcaagatcaagaattggcaaatgggacctcata
aaattgcaaagcttctggggctggtgagatggttcagtggttaagagcaa
cgactgttcttccaaagttcctgagttcaaatcccagcaaccacatggtg
gctcacaaccatccgtaatgagatctgatgccctcttctggagtgtctga
agacagcaacagtgtacttagatataataataaataaatctttaaaaaat
tgcaaagcttctataaggcaaaggacactttcaataaaacaaaacggcat
ccatcagactgggaaaagaactttaccaatcctaaatctgatagggggct
aatatccaacatatataaagaactccagaagttggactccaaaagaccaa
ataaccctattaaaaatggggtacagagctaaactaagaattctcaactg
atgaataccaaatgcccgagaagcacctaacaaaatattcattaagaatt
tttgttcccaagtctgtaaggatcttcaacactctacagtgatatttttt
atctttctgcaggttttgtaatattaaggtacaggtgattcatcagaagt
attggaatgtttcagaagaattatcagtcaattcaggctgcatatggaca
cctaaaaatattcttgttaaaagctttaaagatttatttatacaatcatt
catcaatctccgattttctgcaattgagattatcttgaatattttggatc
atcttgtagccaacactgttgaattcttcttcttgttgcatctattctat
tttgaatagaagaaatctttttcagatatctgtaaagacgtgtgctagct
gaaaagtgtatcttagggcatgtcaaaaatcatgacagacttcttgtatg
agatattgattaagtatagttagtcctacttaaaataaaaagttaaagag
gtttttattattcaccttaaaac

gaattctctggttagctctgttccccatttaaatagggttatttggttct
ctggagtctaccttcttgagttctttgtatatattggctattagccctct
actggatgtagaaatgataaagatcttttcctaatgtgttggttgccatt
ttgtcctattgatagtgtcctttgtcttacaatgtggagcagagactgcc
ccacttggggatccatcccatataaagtaaccaaacccagacactattgt
gaatgccaacaagtgcttgaggacagaagccggatatagctgtctcctaa
gaggctctgagaaagcctgagaaatatagaggaggaagcttgcagccaaa
cattggactgagctcaggagtccctgatgagaggagatgaagaaggaact
gaaggaactgagggagtttctagccccacggagggagcaacaatgtcaac
aagccagacacccccagagctcccttggactagaccaccaacataagaat
acacatggagtgacccatggagctgaccacatatgatggctttgctggac
atcagggggaggagaggcccttgggcctgagggtgttcaatgccccagtg
taggggaatgtcctacagggcaagaggatgggagtgggtgagtgggggag
catttct
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr16_82315878_82316856
seq2: B6Ng01-163J15.b_140_1117 (reverse)

seq1  GTTTT-AGGTGAATAATTAAAAACCTCTTTAAACTTTGTATTTTTAAGTA  49
      ||||| |||||||||| ||||||||||||| |||||| || |||||||||
seq2  GTTTTAAGGTGAATAA-TAAAAACCTCTTT-AACTTTTTA-TTTTAAGTA  47

seq1  GAACTAACTATACTTAATCAATATCTTCATAC-AGAAGTCTGTCATGATT  98
      | ||||||||||||||||||||||| |||||| |||||||||||||||||
seq2  GGACTAACTATACTTAATCAATATC-TCATACAAGAAGTCTGTCATGATT  96

seq1  TTTGACATGCCCT-AGATACACTTTTCAGCTAGCACACGTCTTTACAGAT  147
      ||||||||||||| ||||||||||||||||||||||||||||||||||||
seq2  TTTGACATGCCCTAAGATACACTTTTCAGCTAGCACACGTCTTTACAGAT  146

seq1  ATCTGAAAAAGATTTCTTCTATTCAAAATAGAATAGATGCAACAAGAAGA  197
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATCTGAAAAAGATTTCTTCTATTCAAAATAGAATAGATGCAACAAGAAGA  196

seq1  AGAATTCAACAGTGTTGGCTACAAGATGATCCAAAATATTCAAGATAATC  247
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAATTCAACAGTGTTGGCTACAAGATGATCCAAAATATTCAAGATAATC  246

seq1  TCAATTGCAGAAAATCGGAGATTGATGAATGATTGTATAAATAAATCTTT  297
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCAATTGCAGAAAATCGGAGATTGATGAATGATTGTATAAATAAATCTTT  296

seq1  AAAGCTTTTAACAAGAATATTTTTAGGTGTCCATATGCAGCCTGAATTGA  347
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAGCTTTTAACAAGAATATTTTTAGGTGTCCATATGCAGCCTGAATTGA  346

seq1  CTGATAATTCTTCTGAAACATTCCAATACTTCTGATGAATCACCTGTACC  397
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGATAATTCTTCTGAAACATTCCAATACTTCTGATGAATCACCTGTACC  396

seq1  TTAATATTACAAAACCTGCAGAAAGATAAAAAATATCACTGTAGAGTGTT  447
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTAATATTACAAAACCTGCAGAAAGATAAAAAATATCACTGTAGAGTGTT  446

seq1  GAAGATCCTTACAGACTTGGGAACAAAAATTCTTAATGAATATTTTGTTA  497
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAAGATCCTTACAGACTTGGGAACAAAAATTCTTAATGAATATTTTGTTA  496

seq1  GGTGCTTCTCGGGCATTTGGTATTCATCAGTTGAGAATTCTTAGTTTAGC  547
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGTGCTTCTCGGGCATTTGGTATTCATCAGTTGAGAATTCTTAGTTTAGC  546

seq1  TCTGTACCCCATTTTTAATAGGGTTATTTGGTCTTTTGGAGTCCAACTTC  597
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTGTACCCCATTTTTAATAGGGTTATTTGGTCTTTTGGAGTCCAACTTC  596

seq1  TGGAGTTCTTTATATATGTTGGATATTAGCCCCCTATCAGATTTAGGATT  647
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGAGTTCTTTATATATGTTGGATATTAGCCCCCTATCAGATTTAGGATT  646

seq1  GGTAAAGTTCTTTTCCCAGTCTGATGGATGCCGTTTTGTTTTATTGAAAG  697
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGTAAAGTTCTTTTCCCAGTCTGATGGATGCCGTTTTGTTTTATTGAAAG  696

seq1  TGTCCTTTGCCTTATAGAAGCTTTGCAATTTTTTAAAGATTTATTTATTA  747
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTCCTTTGCCTTATAGAAGCTTTGCAATTTTTTAAAGATTTATTTATTA  746

seq1  TTATATCTAAGTACACTGTTGCTGTCTTCAGACACTCCAGAAGAGGGCAT  797
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTATATCTAAGTACACTGTTGCTGTCTTCAGACACTCCAGAAGAGGGCAT  796

seq1  CAGATCTCATTACGGATGGTTGTGAGCCACCATGTGGTTGCTGGGATTTG  847
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGATCTCATTACGGATGGTTGTGAGCCACCATGTGGTTGCTGGGATTTG  846

seq1  AACTCAGGAACTTTGGAAGAACAGTCGTTGCTCTTAACCACTGAACCATC  897
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACTCAGGAACTTTGGAAGAACAGTCGTTGCTCTTAACCACTGAACCATC  896

seq1  TCACCAGCCCCAGAAGCTTTGCAATTTTATGAGGTCCCATTTGCCAATTC  947
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCACCAGCCCCAGAAGCTTTGCAATTTTATGAGGTCCCATTTGCCAATTC  946

seq1  TTGATCTTGCAGCACAAGCCATTGATGTTCTG  979
      ||||||||||||||||||||||||||||||||
seq2  TTGATCTTGCAGCACAAGCCATTGATGTTCTG  978


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