BAC Information

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BAC

Clone NameB6Ng01-163O20
Chromosome16 (Build37)
Map Location 41,106,837 - 41,108,009
singlet/doubletsinglet
Overlap genenone
Upstream genenone
Downstream geneEG667450, Lsamp
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-163O20.bB6Ng01-163O20.g
ACCDH956390DH956391
length1,1421,172
definitionDH956390|Mus musculus domesticus DNA, BAC clone: B6Ng01-163O20, 5' end.DH956391|Mus musculus domesticus DNA, BAC clone: B6Ng01-163O20, 3' end.
singlet/doubletsinglet---
BLAST hituniqueno hit data
sequence
gaattctatcctaatactacctattctgtagtctgattatattttattgt
ttatttccttctatttttattttcttgtccttctttcctccttccttcct
ttccttccctttttttcccattcattccttttcttttccttttctcttct
cttcttttcctttcctttcctttcctttcctttcctttcctttcctttcc
tttcctttcctttccttttcttcccttccctttcctttcctttcctttct
tctgtcccctttcctttgtcctttttgtgtctttcctttctcttccaagg
aatcaaatgtaaggctgtgtgcatgcttggcaattgctctggcctgagtg
gcactcccagctcccagttctttccttattgctttttaagtggttctcat
gttggggatacatcctagttacagctggagtaggcttggagttaactttt
cctttaaatatatctacaggcaagacatgttacctttttcattccataaa
aagcaagaatcaaatgcctacctagtcatcacactttaagttatacaaat
tgataggtgggttaggtgcagtttaggctgcctatctctactataaattt
tctcattagtattctacttgttagtcctcttagctactgatgagccttgc
ctagaaccattatttcattaaagctctcaaagtagtaattttgagttcaa
ttattctatttcctacctataattctttcatatagaagagatttttctca
tcaaatatttgagtaccctgaaatacacttaactatttgaactatcatta
tgaaatgttaaaaaaaaagtagtttggtggttctataaagacataatgta
attcaatcttactgtcaacctatatgtcatatacattaacatactatagc
tgtgtaagtgccagggaatctatgtagagatgcagagtctgagttaaaaa
tgatttgctggatgaccttagtcactccccttaccttcagcatatttgcc
tgatgaggaaactcacagtcttccgtgtgcagttagcaaagtatgcaatg
actggagtaactccattcgagcaggcacactatcatagtctcgagattcg
tactttctattcgtctcacccaattgcaaagagttaagcaat
gaattcttacctgaggaataccgaatggcagagaagcacctgaaaaaatg
ttcaacatccttaatcatcagggaaatgcaaatcaaaacaaccctgagat
tccacctcataccagtcagaatggctaagatcaaaaattcaggtgacagc
agatgctgtcatggatgtggagaaagaggaacactcctccattgttggtg
ggattgcaggcttgtacaaccactctggaaatcagtctggcggttcctca
gaaaattggacatagtactaccggaggatccagcaatacctctcctgggc
atatatccagaagatgccccaactggtaagaaggacacatgctccactat
cttcatagcagcctcatttataatagccagaagctggaaagaacccagat
gcccctcaacagaggagtggatacagaaaatgtggtaaatctacacaatg
gagtactactcagctattaaaaagaatgaatttatgaaattcctagccaa
atggatggacctggagggcatcatcctgagtgaggtaacacattcacaaa
ggaactcacacaatatgtactcactgataagtggatattagccccaaacc
taggattcccaagatataagatacaatttgctaaacacatgaaactcaag
aagaatgaagactgaagtgtggacactatgcccctccttagaattgggaa
caaaacacccatggaaggagttacagagacaaagtttggagctgagatga
aaaggatggaccatgtagagactgccatatccagggatccaccccataat
cagcatccaaacgctgacacaattgcatacactagcaagattttattgaa
aggacccagatgtagctgtctcttgtgagactatgccggggcctagcaaa
cacagaagtggatgctcacagtcagctaatggatggatcacagggctccc
atggaggagctagagaaagaacccaagagctaaagggatctgcaacctat
taggtggaacaacattatgactaccagtacccggagcctcttgacttcta
gctgcatttgtatcaaaagattgtctagtcggccatccctggaagagaag
cccatggaacacccaacctttatatggcagtacaggtaaacgtctgtgaa
atggggaatggttggaatgggt
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr16_41106837_41108009
seq2: B6Ng01-163O20.b_45_1186

seq1  GAATTCTATCCTAATACTACCTATTCTGTAGTCTGATTATATTTTATTGT  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCTATCCTAATACTACCTATTCTGTAGTCTGATTATATTTTATTGT  50

seq1  TTATTTCCTTCTATTTTTATTTTCTTGTCCTTCTTTCCTCCTTCCTTCCT  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTATTTCCTTCTATTTTTATTTTCTTGTCCTTCTTTCCTCCTTCCTTCCT  100

seq1  TTCCTTCCCTTTTTTTCCCATTCATTCCTTTTCTTTTCCTTTTCTCTTCT  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCCTTCCCTTTTTTTCCCATTCATTCCTTTTCTTTTCCTTTTCTCTTCT  150

seq1  CTTCTTTTCCTTTCCTTTCCTTTCCTTTCCTTTCCTTTCCTTTCCTTTCC  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTCTTTTCCTTTCCTTTCCTTTCCTTTCCTTTCCTTTCCTTTCCTTTCC  200

seq1  TTTCCTTTCCTTTCCTTTTCTTCCCTTCCCTTTCCTTTCCTTTCCTTTCT  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTCCTTTCCTTTCCTTTTCTTCCCTTCCCTTTCCTTTCCTTTCCTTTCT  250

seq1  TCTGTCCCCTTTCCTTTGTCCTTTTTGTGTCTTTCCTTTCTCTTCCAAGG  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTGTCCCCTTTCCTTTGTCCTTTTTGTGTCTTTCCTTTCTCTTCCAAGG  300

seq1  AATCAAATGTAAGGCTGTGTGCATGCTTGGCAATTGCTCTGGCCTGAGTG  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATCAAATGTAAGGCTGTGTGCATGCTTGGCAATTGCTCTGGCCTGAGTG  350

seq1  GCACTCCCAGCTCCCAGTTCTTTCCTTATTGCTTTTTAAGTGGTTCTCAT  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCACTCCCAGCTCCCAGTTCTTTCCTTATTGCTTTTTAAGTGGTTCTCAT  400

seq1  GTTGGGGATACATCCTAGTTACAGCTGGAGTAGGCTTGGAGTTAACTTTT  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTGGGGATACATCCTAGTTACAGCTGGAGTAGGCTTGGAGTTAACTTTT  450

seq1  CCTTTAAATATATCTACAGGCAAGACATGTTACCTTTTTCATTCCATAAA  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTTTAAATATATCTACAGGCAAGACATGTTACCTTTTTCATTCCATAAA  500

seq1  AAGCAAGAATCAAATGCCTACCTAGTCATCACACTTTAAGTTATACAAAT  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGCAAGAATCAAATGCCTACCTAGTCATCACACTTTAAGTTATACAAAT  550

seq1  TGATAGGTGGGTTAGGTGCAGTTTAGGCTGCCTATCTCTACTATAAATTT  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGATAGGTGGGTTAGGTGCAGTTTAGGCTGCCTATCTCTACTATAAATTT  600

seq1  TCTCATTAGTATTCTACTTGTTAGTCCTCTTAGCTACTGATGAGCCTTGC  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTCATTAGTATTCTACTTGTTAGTCCTCTTAGCTACTGATGAGCCTTGC  650

seq1  CTAGAACCATTATTTCATTAAAGCTCTCAAAGTAGTAATTTTGAGTTCAA  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTAGAACCATTATTTCATTAAAGCTCTCAAAGTAGTAATTTTGAGTTCAA  700

seq1  TTATTCTATTTCCTACCTATAATTCTTTCATATAGAAGAGATTTTTCTCA  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTATTCTATTTCCTACCTATAATTCTTTCATATAGAAGAGATTTTTCTCA  750

seq1  TCAAATATTTGAGTACCCTGAAATACACTTAACTATTTGAACTATCATTA  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCAAATATTTGAGTACCCTGAAATACACTTAACTATTTGAACTATCATTA  800

seq1  TGAAATGTTAAAAAAAAAAGTAGTTTGGTGGTTCTATAAAGACATAATGG  850
      ||||||||| ||||||||||||||||||||||||||||||||||||||| 
seq2  TGAAATGTT-AAAAAAAAAGTAGTTTGGTGGTTCTATAAAGACATAATGT  849

seq1  AATTCAATCTTACTGTCAACCTATATGTCATATACATTAACATACTATAG  900
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATTCAATCTTACTGTCAACCTATATGTCATATACATTAACATACTATAG  899

seq1  CTGTGTAAGTGCCAGGGAATCTATGTAGAGAATGCAGAGTCTGAGTTTAA  950
      |||||||||||||||||||||||||||||| |||||||||||||| ||||
seq2  CTGTGTAAGTGCCAGGGAATCTATGTAGAG-ATGCAGAGTCTGAG-TTAA  947

seq1  AAATGATTTTCCTGTAGGACCTTAGTCACACCTCTTACCTTCCAGCAATT  1000
      |||||| ||| ||| | |||||||||||| || |||||||| ||||    
seq2  AAATGA-TTTGCTGGATGACCTTAGTCACTCCCCTTACCTT-CAGC----  991

seq1  ATTTTTGCCTGATGAGGGAAAACTCACAGTTCTTCTGTGTGCAGTTTAAC  1050
      || ||||||||||||||  |||||||||| ||||| |||||||| ||| |
seq2  ATATTTGCCTGATGAGG--AAACTCACAG-TCTTCCGTGTGCAG-TTAGC  1037

seq1  AAATGTTAAATCATATACATGGTGTTAACTTCCACTTCGAAACCCATGGG  1100
      ||| ||   ||   ||   ||| | |||| |||| |||||    ||  ||
seq2  AAA-GT---ATGCAATGACTGGAG-TAAC-TCCA-TTCGA---GCA--GG  1075

seq1  CAACACTATCATTATCATCGAGATTTCTGATACTTTCTAATCATTTCTAC  1150
      | ||||||||||  || |||||||   |  ||||||||| || | || ||
seq2  C-ACACTATCATAGTC-TCGAGAT---TCGTACTTTCTATTCGTCTC-AC  1119

seq1  CCATCTCCAAAGAGTTAAGCATT  1173
      |||  | |||||||||||||| |
seq2  CCAATTGCAAAGAGTTAAGCAAT  1142