BAC Information

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BAC

Clone NameB6Ng01-164D10
Chromosome16 (Build37)
Map Location 93,049,210 - 93,089,122
singlet/doubletdoublet
Overlap genenone
Upstream geneMrps6, Slc5a3, Kcne2, 1190017O12Rik, 4930563D23Rik, Kcne1, Dscr1, 2410124H12Rik, Clic6, Runx1, EG666023
Downstream geneLOC100040747, Setd4, LOC670912, Cbr1, EG435489, Cbr3, Dopey2, Morc3, Chaf1b, Cldn14, Sim2
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-164D10.bB6Ng01-164D10.g
ACCDH956597DH956598
length1,1691,054
definitionDH956597|Mus musculus domesticus DNA, BAC clone: B6Ng01-164D10, 5' end.DH956598|Mus musculus domesticus DNA, BAC clone: B6Ng01-164D10, 3' end.
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(93,087,936 - 93,089,122)(93,049,210 - 93,050,268)
sequence
gaattctattaaaataacattttgtagctcccatgtgcaagttaactgtt
accccacgtgcaagcaattaactactgatgtgtgcacttttgttccaact
ggcgctaaaaaaaaaaagagagagagacacattcaatggattatatttta
ggatttgagtgttttatagtgatgattgggcagtcactgtagaaaggggg
aagaaacgtgcagatcctgccgtgtaaggtgattgatcccagagtgactc
ctgagagctccacagagcaccaaaacccttccaaagatgccccgtctaca
gccagaaggcactgtgtaaactacagagcttaagctcctggattgaaagc
tagtgggaagaatgagtcccatcctgcaaagaggctgagccaagaggagt
cagccgagtggcagacacagaacccagaaacggggtggataggctcccgg
ttggtgttctccactgtcccctacagatcccatttgggcttgttaatatc
gattatcaactcaacaggagctgggagcgcccaggaggcagccctctggg
catgcttatgagaggtttttctggattgggttcttggaagcgaaaagacc
tgtcttaaatgggaagagcattttgagacatactgtctgttcctccttcc
tttcctccctctgtgcctggatcctccctaccccacgtcatcatggggat
ggcctgtatggctgtaatggccacccgaaagatgccgccgtagcacaaga
gcgactttgagctaaatatatttgatcgctgagagatacggagatgctct
gtgccctagcactgcctgcctgagagcaaggcgcacacctccacttcacc
cggaggggagctagctgttcctcaatccataccagagcgtggaagggtga
ctgcatcaaagacaaagattccctgatcgataccgagatgggtttgcgtt
agcaggcctccctaaaaatagcctgtacctttctttactttccctgtgta
tatcctgactcatacccataatgtatcgtcctatcttggaatccagattt
gtttctctgcgagagggcacaggaatctgaaatcaaactgctctcgagtt
accccttccatgagacacctacactggagatctaaatctgggagcctgtc
cctagtctgtgattgactc
gaattcccttcttcatctccgaaatgacggatttgcacttttcacacttg
agctgcaggagtgtacaaagtttacactgaactaaagccttctttgtgtt
tcccacttctgactccctcaaacatacagctgcaccgtcttttcaaatcc
tcactagactgctaatttaaagagaaggaattaaagaatctagctctgtc
cacatctccagagatctgttttataataaaattctttgataacgttatat
tcctaaagataaagtaaatgtaaccttttaccttattttgctcaattaga
ttgttcagaaaaccatagtggtgcagacaccgtgaaatttaacattctaa
ttctgatgttgtgtattgttttacctaacattttggaaggtacctgcccc
tgacctgagtcaagaagtcaccttttttgttggtaatggaatggcatatt
ttattttattttatttttaaagatttatttatatgagtacactgttgctg
tcttcagacacaccagaagagggcctcaaatcccattacagatggttgtg
agccaccatgtggttgctgggaattgaactcaggactcctggaagagcag
tcaatgctcttaaccgctgaaccatctctctccagtccctggaatggcat
ttttaaatggcagtttttataatggtcgttagtgaatataaagacagttc
atcatcatcctttaaaaatcacaaatgtataatgtctcagtaggtgaggt
gctcatgcagcaagcatggagatgtgaatgagtgtgggacaccacccccc
cagcagccatgtgaagaagccaggtacagttctatgcccgtgcctgaaac
cctggttctcagggcagagacatgtaaatcccagggcttttgctgaccat
catcctaaccaactctccatcttcaggtcacttgaagattttttaaatac
agaaagtgattgaggagatagccctactctggcctgcacatgtgccttca
caggtgaacacacctgcatacccagctgcaagctgactcttccccctaca
caca
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr16_93087936_93089122
seq2: B6Ng01-164D10.b_47_1215 (reverse)

seq1  GAGTCAAAACACAGACTATGAGGAGGACAAGCTCACAGATTTTATGAATT  50
      ||||| || |||||||||      ||||| |||| |||||||    |  |
seq2  GAGTC-AATCACAGACTA-----GGGACAGGCTCCCAGATTT----AGAT  40

seq1  CTCAGGTGTAGGTG-CTCATGGGAAGGGGGTAACTCGGAGAAGCAGTTTG  99
      |||  ||||||||| |||||||  | |||||||||| ||| |||||||||
seq2  CTCCAGTGTAGGTGTCTCATGG--AAGGGGTAACTC-GAG-AGCAGTTTG  86

seq1  ATTTCAGGATTCCTGTGCCCTCTCGGCAGAGGAAACAAAATCTGGATTTC  149
      |||||| ||||||||||||||||| ||||| ||||| ||||||||||| |
seq2  ATTTCA-GATTCCTGTGCCCTCTC-GCAGA-GAAAC-AAATCTGGATTCC  132

seq1  AAAGGATAGGACGATACATTATGGGTATGAGGTCAGGATATACACAGGGA  199
      ||  |||||||||||||||||||||||||| |||||||||||||||||||
seq2  AA--GATAGGACGATACATTATGGGTATGA-GTCAGGATATACACAGGGA  179

seq1  AAGTAAAGAAAGGTACAGGCTATTTTTAGGGAGGCCTGCTAACGCAAACC  249
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGTAAAGAAAGGTACAGGCTATTTTTAGGGAGGCCTGCTAACGCAAACC  229

seq1  CATCTCGGTATCGATCAGGGAATCTTTGTCTTTGATGCAGTCA-CCTTCC  298
      ||||||||||||||||||||||||||||||||||||||||||| ||||||
seq2  CATCTCGGTATCGATCAGGGAATCTTTGTCTTTGATGCAGTCACCCTTCC  279

seq1  ACGCTCTGGTATGGATTGAGGAACAGCTAGCT-CCCTCCGGGTGAAGTGG  347
      |||||||||||||||||||||||||||||||| |||||||||||||||||
seq2  ACGCTCTGGTATGGATTGAGGAACAGCTAGCTCCCCTCCGGGTGAAGTGG  329

seq1  AGGTGTGCGCCTTGCTCTCAGGCAGGCAGTGCTAGGGCACAGAGCATCTC  397
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGTGTGCGCCTTGCTCTCAGGCAGGCAGTGCTAGGGCACAGAGCATCTC  379

seq1  CGTATCTCTCAGCGATCAAATATATTTAGCTCAAAGTCGCTCTTGTGCTA  447
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CGTATCTCTCAGCGATCAAATATATTTAGCTCAAAGTCGCTCTTGTGCTA  429

seq1  CGGCGGCATCTTTCGGGTGGCCATTACAGCCATACAGGCCATCCCCATGA  497
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CGGCGGCATCTTTCGGGTGGCCATTACAGCCATACAGGCCATCCCCATGA  479

seq1  TGACGTGGGGTAGGGAGGATCCAGGCACAGAGGGAGGAAAGGAAGGAGGA  547
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGACGTGGGGTAGGGAGGATCCAGGCACAGAGGGAGGAAAGGAAGGAGGA  529

seq1  ACAGACAGTATGTCTCAAAATGCTCTTCCCATTTAAGACAGGTCTTTTCG  597
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACAGACAGTATGTCTCAAAATGCTCTTCCCATTTAAGACAGGTCTTTTCG  579

seq1  CTTCCAAGAACCCAATCCAGAAAAACCTCTCATAAGCATGCCCAGAGGGC  647
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTCCAAGAACCCAATCCAGAAAAACCTCTCATAAGCATGCCCAGAGGGC  629

seq1  TGCCTCCTGGGCGCTCCCAGCTCCTGTTGAGTTGATAATCGATATTAACA  697
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGCCTCCTGGGCGCTCCCAGCTCCTGTTGAGTTGATAATCGATATTAACA  679

seq1  AGCCCAAATGGGATCTGTAGGGGACAGTGGAGAACACCAACCGGGAGCCT  747
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGCCCAAATGGGATCTGTAGGGGACAGTGGAGAACACCAACCGGGAGCCT  729

seq1  ATCCACCCCGTTTCTGGGTTCTGTGTCTGCCACTCGGCTGACTCCTCTTG  797
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATCCACCCCGTTTCTGGGTTCTGTGTCTGCCACTCGGCTGACTCCTCTTG  779

seq1  GCTCAGCCTCTTTGCAGGATGGGACTCATTCTTCCCACTAGCTTTCAATC  847
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCTCAGCCTCTTTGCAGGATGGGACTCATTCTTCCCACTAGCTTTCAATC  829

seq1  CAGGAGCTTAAGCTCTGTAGTTTACACAGTGCCTTCTGGCTGTAGACGGG  897
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGGAGCTTAAGCTCTGTAGTTTACACAGTGCCTTCTGGCTGTAGACGGG  879

seq1  GCATCTTTGGAAGGGTTTTGGTGCTCTGTGGAGCTCTCAGGAGTCACTCT  947
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCATCTTTGGAAGGGTTTTGGTGCTCTGTGGAGCTCTCAGGAGTCACTCT  929

seq1  GGGATCAATCACCTTACACGGCAGGATCTGCACGTTTCTTCCCCCTTTCT  997
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGGATCAATCACCTTACACGGCAGGATCTGCACGTTTCTTCCCCCTTTCT  979

seq1  ACAGTGACTGCCCAATCATCACTATAAAACACTCAAATCCTAAAATATAA  1047
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACAGTGACTGCCCAATCATCACTATAAAACACTCAAATCCTAAAATATAA  1029

seq1  TCCATTGAATGTGTCTCTCTCTCTTTTTTTTTTTAGCGCCAGTTGGAACA  1097
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCATTGAATGTGTCTCTCTCTCTTTTTTTTTTTAGCGCCAGTTGGAACA  1079

seq1  AAAGTGCACACATCAGTAGTTAATTGCTTGCACGTGGGGTAACAGTTAAC  1147
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAGTGCACACATCAGTAGTTAATTGCTTGCACGTGGGGTAACAGTTAAC  1129

seq1  TTGCACATGGGAGCTACAAAATGTTATTTTAATAGAATTC  1187
      ||||||||||||||||||||||||||||||||||||||||
seq2  TTGCACATGGGAGCTACAAAATGTTATTTTAATAGAATTC  1169

seq1: chr16_93049210_93050268
seq2: B6Ng01-164D10.g_67_1120

seq1  GAATTCCCTTCTTCATCTCCGAAATGACGGATTTGCACTTTTCACACTTG  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCCCTTCTTCATCTCCGAAATGACGGATTTGCACTTTTCACACTTG  50

seq1  AGCTGCAGGAGTGTACAAAGTTTACACTGAACTAAAGCCTTCTTTGTGTT  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGCTGCAGGAGTGTACAAAGTTTACACTGAACTAAAGCCTTCTTTGTGTT  100

seq1  TCCCACTTCTGACTCCCTCAAACATACAGCTGCACCGTCTTTTCAAATCC  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCCACTTCTGACTCCCTCAAACATACAGCTGCACCGTCTTTTCAAATCC  150

seq1  TCACTAGACTGCTAATTTAAAGAGAAGGAATTAAAGAATCTAGCTCTGTC  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCACTAGACTGCTAATTTAAAGAGAAGGAATTAAAGAATCTAGCTCTGTC  200

seq1  CACATCTCCAGAGATCTGTTTTATAATAAAATTCTTTGATAACGTTATAT  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACATCTCCAGAGATCTGTTTTATAATAAAATTCTTTGATAACGTTATAT  250

seq1  TCCTAAAGATAAAGTAAATGTAACCTTTTACCTTATTTTGCTCAATTAGA  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCTAAAGATAAAGTAAATGTAACCTTTTACCTTATTTTGCTCAATTAGA  300

seq1  TTGTTCAGAAAACCATAGTGGTGCAGACACCGTGAAATTTAACATTCTAA  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGTTCAGAAAACCATAGTGGTGCAGACACCGTGAAATTTAACATTCTAA  350

seq1  TTCTGATGTTGTGTATTGTTTTACCTAACATTTTGGAAGGTACCTGCCCC  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCTGATGTTGTGTATTGTTTTACCTAACATTTTGGAAGGTACCTGCCCC  400

seq1  TGACCTGAGTCAAGAAGTCACCTTTTTTGTTGGTAATGGAATGGCATATT  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGACCTGAGTCAAGAAGTCACCTTTTTTGTTGGTAATGGAATGGCATATT  450

seq1  TTATTTTATTTTATTTTTAAAGATTTATTTATATGAGTACACTGTTGCTG  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTATTTTATTTTATTTTTAAAGATTTATTTATATGAGTACACTGTTGCTG  500

seq1  TCTTCAGACACACCAGAAGAGGGCCTCAAATCCCATTACAGATGGTTGTG  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTTCAGACACACCAGAAGAGGGCCTCAAATCCCATTACAGATGGTTGTG  550

seq1  AGCCACCATGTGGTTGCTGGGAATTGAACTCAGGACTCCTGGAAGAGCAG  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGCCACCATGTGGTTGCTGGGAATTGAACTCAGGACTCCTGGAAGAGCAG  600

seq1  TCAATGCTCTTAACCGCTGAACCATCTCTCTCCAGTCCCTGGAATGGCAT  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCAATGCTCTTAACCGCTGAACCATCTCTCTCCAGTCCCTGGAATGGCAT  650

seq1  TTTTAAATGGCAGTTTTTATAATGGTCGTTAGTGAATATAAAGACAGTTC  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTTAAATGGCAGTTTTTATAATGGTCGTTAGTGAATATAAAGACAGTTC  700

seq1  ATCATCATCCTTTAAAAATCACAAATGTATAATGTCTCAGTAGGTGAGGT  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATCATCATCCTTTAAAAATCACAAATGTATAATGTCTCAGTAGGTGAGGT  750

seq1  GCTCATGCAGCAAGCATGGAGATGTGAATGAGTGTGGGACACCACCCCCC  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCTCATGCAGCAAGCATGGAGATGTGAATGAGTGTGGGACACCACCCCCC  800

seq1  CAGCAGCCATGTGAAGAAGCCAGGTACAGTTCTATGCCCGTGCCTGAAAC  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGCAGCCATGTGAAGAAGCCAGGTACAGTTCTATGCCCGTGCCTGAAAC  850

seq1  CCTGGTTCTCAGGGCAGAGACATGTAAATCCCAGGGC-TTTGCTGACCAT  899
      ||||||||||||||||||||||||||||||||||||| ||||||||||||
seq2  CCTGGTTCTCAGGGCAGAGACATGTAAATCCCAGGGCTTTTGCTGACCAT  900

seq1  CATCCTAACCAAACTCTCCATCTTCAGGTCACTGAAAGATATTTTAAATA  949
      |||||||||| ||||||||||||||||||||||  ||||| |||||||| 
seq2  CATCCTAACC-AACTCTCCATCTTCAGGTCACTTGAAGATTTTTTAAAT-  948

seq1  ACAGAAAAGTGATTGAGGAAGATAGCCCTACTCTGGCCTGCACATGTGCC  999
      |||| ||||||||||||| |||||||||||||||||||||||||||||||
seq2  ACAG-AAAGTGATTGAGG-AGATAGCCCTACTCTGGCCTGCACATGTGCC  996

seq1  TTCACAGGTGAACACACCTGCATACCCAGCTGCAAGCTGACTCTCCCCCT  1049
      |||||||||||||||||||||||||||||||||||||||||||| |||| 
seq2  TTCACAGGTGAACACACCTGCATACCCAGCTGCAAGCTGACTCTTCCCC-  1045

seq1  ACCACACACA  1059
       | |||||||
seq2  -CTACACACA  1054