BAC Information

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BAC

Clone NameB6Ng01-166G17
Chromosome16 (Build37)
Map Location 89,418,381 - 89,419,081
singlet/doubletsinglet
Overlap genenone
Upstream geneEG622373, Cldn17, Cldn8, Gm312, 2310079G19Rik, 2310002B14Rik, EG665513, 2310061N02Rik, Krtap13-1, Krtap13, 2310034C09Rik, 2310057N15Rik, EG546672, EG433047, 4930553J12Rik, Krtap14, Krtap15, Krtap16-9, Krtap16-1, Krtap16-5, Krtap16-4, Krtap8-2, LOC100040191, AY026312, Krtap16-10, EG621595, LOC100040167, 1110032D16Rik, LOC100040201, Krtap6-1, LOC100040214, Krtap16-8, 1110025L11Rik, LOC100040249, LOC100040267, EG622794, LOC100040281, ENSMUSG00000044227, EG665661, LOC100040288, EG622935, EG622981, EG622998, EG623011, EG623026, LOC100040346, EG623049, LOC100040415, EG640636, LOC640652, LOC640654, LOC100040425, LOC100040374, LOC640656, LOC100040445, LOC100040456, Krtap21-1
Downstream geneKrtap6-2, 5430433J05Rik, Tiam1, LOC100040496, LOC640694, LOC100040440, Sod1, Sfrs15, LOC545175, Hunk
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-166G17.bB6Ng01-166G17.g
ACCDH958208DH958209
length878601
definitionDH958208|Mus musculus domesticus DNA, BAC clone: B6Ng01-166G17, 5' end.DH958209|Mus musculus domesticus DNA, BAC clone: B6Ng01-166G17, 3' end.
singlet/doubletsinglet---
BLAST hituniqueno hit data
sequence
gaattcagtcaagtgagctgattcactgaaacagcaagtatttttgaata
ggtcacagcctggatacaatcaaagtattacagatgaattatatggtctc
cgtgtgtttgcatcacgatcaagaggacagcaagctaggaaagcgtgatg
atacaactgcagcagatgcagctcagtgggaaggggaggatacatcagca
tgtctgtctgttcagggagggactttgaacctgtattctttgagataata
ctgaaaagatgacagtagcaaagaaaatttactaaataatgttaaggaga
aaacaaagtttcttacattttaggaccaggtgaagatgacaaaaatcaat
ggccagacccggatatagaatatttgaagtgtggcaagaatgaaatgaag
tgcaaaataaaataccaactgccaaacactaagtcagtgggattcgtctg
ggatgggattagatatgacaatggtattaattaattaactaattaattaa
tttcttttattattttttcttttgtttaaaatagcttttttcctcacata
atatatccagattatattccccccctctctactccttccactactccttc
cactttcttcccaccattgcccctcccatctggatccacaccctgtcatt
agaataaaacagattttaaaaggataataatataataaatataatatgat
aaaacaaaaataaatatgttgaaattggacaaagtaaactaacagatatg
aaagagctcaagaaaaatataaggaacagatataaacacagaaattcaac
tgttcacatattcaggatcccataaaaacatgaaactggaagccataata
tatatgccagtactcataggataagaaa
gaattcattgtttttaatagctgagaccaaagtgtggatacttcagtcct
tcttagaagggggaacaaaatacccatggaaggagttatagagacaaagt
gtggagcagagactgaaggaataccatacagaggctgccccaattggaga
tccattccatatacaatcaccaaatccagacacttttatggatgtcaaca
agtgcttgctgacagaagcctgttatagctgtctctggagaggctccacc
agtgcctgacaaatacagaggtggatactcacagcattggactgagcaca
gggtccccaatgaaggagctaaagaaaagacccaaggagctaaaggggtt
tgcagccccataggagaaacagcaatatgaactaaccagtacccccaaag
ctcccagggactaaaccaccaaccaaagagtatacatggtgggactcatg
gctccaactgcatatgtatcagacaatggcctagttggtcatcaatggga
ggagaggcccttgatcctgtgaaggctctatgccccagtagaggggaatg
ccagggccaggaagcagagtgggttgtttggtgagcggggggtggagggg
g
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr16_89418381_89419081
seq2: B6Ng01-166G17.b_43_743 (reverse)

seq1  TATCATATTATATTTATTATATTATTATCCTTTTAAAATCTGTTTTATTC  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATCATATTATATTTATTATATTATTATCCTTTTAAAATCTGTTTTATTC  50

seq1  TAATGACAGGGTGTGGATCCAGATGGGAGGGGCAATGGTGGGAAGAAAGT  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAATGACAGGGTGTGGATCCAGATGGGAGGGGCAATGGTGGGAAGAAAGT  100

seq1  GGAAGGAGTAGTGGAAGGAGTAGAGAGGGGGGGAATATAATCTGGATATA  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGAAGGAGTAGTGGAAGGAGTAGAGAGGGGGGGAATATAATCTGGATATA  150

seq1  TTATGTGAGGAAAAAAGCTATTTTAAACAAAAGAAAAAATAATAAAAGAA  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTATGTGAGGAAAAAAGCTATTTTAAACAAAAGAAAAAATAATAAAAGAA  200

seq1  ATTAATTAATTAGTTAATTAATTAATACCATTGTCATATCTAATCCCATC  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTAATTAATTAGTTAATTAATTAATACCATTGTCATATCTAATCCCATC  250

seq1  CCAGACGAATCCCACTGACTTAGTGTTTGGCAGTTGGTATTTTATTTTGC  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCAGACGAATCCCACTGACTTAGTGTTTGGCAGTTGGTATTTTATTTTGC  300

seq1  ACTTCATTTCATTCTTGCCACACTTCAAATATTCTATATCCGGGTCTGGC  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTTCATTTCATTCTTGCCACACTTCAAATATTCTATATCCGGGTCTGGC  350

seq1  CATTGATTTTTGTCATCTTCACCTGGTCCTAAAATGTAAGAAACTTTGTT  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATTGATTTTTGTCATCTTCACCTGGTCCTAAAATGTAAGAAACTTTGTT  400

seq1  TTCTCCTTAACATTATTTAGTAAATTTTCTTTGCTACTGTCATCTTTTCA  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCTCCTTAACATTATTTAGTAAATTTTCTTTGCTACTGTCATCTTTTCA  450

seq1  GTATTATCTCAAAGAATACAGGTTCAAAGTCCCTCCCTGAACAGACAGAC  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTATTATCTCAAAGAATACAGGTTCAAAGTCCCTCCCTGAACAGACAGAC  500

seq1  ATGCTGATGTATCCTCCCCTTCCCACTGAGCTGCATCTGCTGCAGTTGTA  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGCTGATGTATCCTCCCCTTCCCACTGAGCTGCATCTGCTGCAGTTGTA  550

seq1  TCATCACGCTTTCCTAGCTTGCTGTCCTCTTGATCGTGATGCAAACACAC  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCATCACGCTTTCCTAGCTTGCTGTCCTCTTGATCGTGATGCAAACACAC  600

seq1  GGAGACCATATAATTCATCTGTAATACTTTGATTGTATCCAGGCTGTGAC  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGAGACCATATAATTCATCTGTAATACTTTGATTGTATCCAGGCTGTGAC  650

seq1  CTATTCAAAAATACTTGCTGTTTCAGTGAATCAGCTCACTTGACTGAATT  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTATTCAAAAATACTTGCTGTTTCAGTGAATCAGCTCACTTGACTGAATT  700

seq1  C  701
      |
seq2  C  701