BAC Information

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BAC

Clone NameB6Ng01-169F13
Chromosome16 (Build37)
Map Location 70,202,782 - 70,203,825
singlet/doubletsinglet
Overlap genenone
Upstream geneSpeer2
Downstream geneEG664930, Gbe1, D16Ertd519e, LOC100039231
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-169F13.bB6Ng01-169F13.g
ACCDH960351DH960352
length1,0421,194
definitionDH960351|Mus musculus domesticus DNA, BAC clone: B6Ng01-169F13, 5' end.DH960352|Mus musculus domesticus DNA, BAC clone: B6Ng01-169F13, 3' end.
singlet/doubletsinglet---
BLAST hituniqueno hit data
sequence
gaattcattcttgttttgggggagaaaaataagacaaaagaatagcaaaa
acactgagaaaacagataacatatatagttcatggaataagagatcgtta
gtcatgactgcaggagattcaatttccccatgagatgaaacattactgta
agtatatgttatagtgtgaatataacatgtccccactgtccttggtttgg
gaatgctctggaaattttagaaggtacttatttgaaggaactactaggtt
acagatgacagaaagaaggctcttttattgcttttccttctctatgtata
cgccctgaggtttccatttctctaaaccatctcttctacatatggatttc
acattcataatatctcagaactgcagaaccaagccaccaagaacagaacc
ctctgaaacatgacccaaaagcaaatcttccattgatattttttgtcata
atttcagtggtttggtccaagtaatgaaaagcatcaatatgttaattcat
ttaatggaattcattttaatatgctatatgtctcaagtggcaagaacttt
ttccattgcaaatactgtatacttagaacagtgactctcaacctgtaaag
ttgcaaccttttaggcaaacttctatctccaaaactatttacattactat
tcataagagtagcaaaattacaagtatgaagtagcaaccaaaataatgtt
aaggttggcagtcagcacaacatgaggaactgtattaaaaggttgcagca
ttaggaaggttgagaagcactgctttataaactatgagttgtttatacta
tgtacatatacatggctaatttggctgcaacaatgaatgtggccatctct
ttacatgtggctttgtacctaggcaaatattaactttatatgagttatcc
ttcatagataagtgataagaacagaatatagaaactagacagctaacatc
atgacctggaaaatagcacttctatgaatgtctttggttctctgctgaga
attttataaggaaatatccttctgtcttttctgtctttgctg
gaattcaatgaaagcagtgcaagggaaaattcataactctaagtgccctg
gtaaagaaactggagaaatcttacactaacaacttaacagcacacctgag
agctgtagaacaaaaagaagtaaacttacccaagaggagtagaaggtttg
aaatagtcaaactcggggacgaaatcaaccaaatagaaacaaggaaaaca
atacagagaatcagcaaaaccaaacactggttctatgacagaatcaacaa
aatagataaaccctagccaaactaactaaacggccaagaggcagtatcca
aattaataaaatcagaaatgaaaagggagacataacaagagaaatggagg
aaatacaaaaatcatcatatcttactataaaagcatatactcaacaaaac
ttgaaaaatctagatgaaatggatggttttcaaaatgctacataccaagg
ttaaatgaagagcaggtaaactatctaaacaggcccacatcacacaggaa
atagaagaagtcattaaaaaacctcccaaccaaaaaaagcccaggaccag
atggatttagtgcagtattctaccagactttcaaagaagacctgatacca
attttcctcaaactattccacaaaatagaaacagaaggaacactgcctaa
ctatgaactatgaagccactattactctgatacctaaaccacacaaagac
ctaacaaaaaaaaagagaacttcagaccaatctggcttatgaatatcgag
gcaaaaatactcaaaatttttgcaagctgaatccaagaatacatcaaaac
catcatttagcacaatcaagtaggcttcatcccaggggtgcaaggtttgt
ttaatatatgaaatcaattgacgtaatccattatataaacaaactcaaag
aaaaaatcacctggcatctccttagatgcagacaaagcatttgacaaaat
acacagcttcatgagagatcagcattcaggcccatactaacatataaagc
atttactgcaagcagcagcatatcaataaatgagacatacttgaagcatc
tcactgaaatagggacagacagatgcccactctctcaatctattaattag
tacttgaatgtagctgacatagacacaaagagatcagttccattggcaga
gaataaggttacattgcatgtatgagagttacatagagactgat
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr16_70202782_70203825
seq2: B6Ng01-169F13.b_46_1083 (reverse)

seq1  AAAGACAAGAAAAAGACAAGAAAGGATATTTCCCTTATAAAATTCTCAGC  50
      |||||||   ||||||||   |||||||||| ||||||||||||||||||
seq2  AAAGACA--GAAAAGACA--GAAGGATATTT-CCTTATAAAATTCTCAGC  45

seq1  AGAGAACCAAAGACATTCATAGAAGTGCTATTTTCCAGGTCATGATGTTA  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAGAACCAAAGACATTCATAGAAGTGCTATTTTCCAGGTCATGATGTTA  95

seq1  GCTGTCTAGTTTCTATATTCTGTTCTTATCACTTATTCTATGAAGGATAA  150
      ||||||||||||||||||||||||||||||||||| ||||||||||||||
seq2  GCTGTCTAGTTTCTATATTCTGTTCTTATCACTTA-TCTATGAAGGATAA  144

seq1  CTCATATAAAGTTAATATTTGCCTAGGTACAAAGCCACATGTAAAGAGAT  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCATATAAAGTTAATATTTGCCTAGGTACAAAGCCACATGTAAAGAGAT  194

seq1  GGCCACATTCATTGTTGCAGCCAAATTAGCCATGTATATGTACATAGTAT  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGCCACATTCATTGTTGCAGCCAAATTAGCCATGTATATGTACATAGTAT  244

seq1  AAACAACTCATAGTTTATAAAGCAGTGCTTCTCAACCTTCCTAATGCTGC  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAACAACTCATAGTTTATAAAGCAGTGCTTCTCAACCTTCCTAATGCTGC  294

seq1  AACCTTTTAATACAGTTCCTCATGTTGTGCTGACTGCCAACCTTAACATT  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACCTTTTAATACAGTTCCTCATGTTGTGCTGACTGCCAACCTTAACATT  344

seq1  ATTTTGGTTGCTACTTCATACTTGTAATTTTGCTACTCTTATGAATAGTA  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTTTGGTTGCTACTTCATACTTGTAATTTTGCTACTCTTATGAATAGTA  394

seq1  ATGTAAATAGTTTTGGAGATAGAAGTTTGCCTAAAAGGTTGCAACTTTAC  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGTAAATAGTTTTGGAGATAGAAGTTTGCCTAAAAGGTTGCAACTTTAC  444

seq1  AGGTTGAGAGTCACTGTTCTAAGTATACAGTATTTGCAATGGAAAAAGTT  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGTTGAGAGTCACTGTTCTAAGTATACAGTATTTGCAATGGAAAAAGTT  494

seq1  CTTGCCACTTGAGACATATAGCATATTAAAATGAATTCCATTAAATGAAT  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTGCCACTTGAGACATATAGCATATTAAAATGAATTCCATTAAATGAAT  544

seq1  TAACATATTGATGCTTTTCATTACTTGGACCAAACCACTGAAATTATGAC  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAACATATTGATGCTTTTCATTACTTGGACCAAACCACTGAAATTATGAC  594

seq1  AAAAAATATCAATGGAAGATTTGCTTTTGGGTCATGTTTCAGAGGGTTCT  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAAAATATCAATGGAAGATTTGCTTTTGGGTCATGTTTCAGAGGGTTCT  644

seq1  GTTCTTGGTGGCTTGGTTCTGCAGTTCTGAGATATTATGAATGTGAAATC  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTCTTGGTGGCTTGGTTCTGCAGTTCTGAGATATTATGAATGTGAAATC  694

seq1  CATATGTAGAAGAGATGGTTTAGAGAAATGGAAACCTCAGGGCGTATACA  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATATGTAGAAGAGATGGTTTAGAGAAATGGAAACCTCAGGGCGTATACA  744

seq1  TAGAGAAGGAAAAGCAATAAAAGAGCCTTCTTTCTGTCATCTGTAACCTA  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAGAGAAGGAAAAGCAATAAAAGAGCCTTCTTTCTGTCATCTGTAACCTA  794

seq1  GTAGTTCCTTCAAATAAGTACCTTCTAAAATTTCCAGAGCATTCCCAAAC  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTAGTTCCTTCAAATAAGTACCTTCTAAAATTTCCAGAGCATTCCCAAAC  844

seq1  CAAGGACAGTGGGGACATGTTATATTCACACTATAACATATACTTACAGT  900
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAAGGACAGTGGGGACATGTTATATTCACACTATAACATATACTTACAGT  894

seq1  AATGTTTCATCTCATGGGGAAATTGAATCTCCTGCAGTCATGACTAACGA  950
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATGTTTCATCTCATGGGGAAATTGAATCTCCTGCAGTCATGACTAACGA  944

seq1  TCTCTTATTCCATGAACTATATATGTTATCTGTTTTCTCAGTGTTTTTGC  1000
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTCTTATTCCATGAACTATATATGTTATCTGTTTTCTCAGTGTTTTTGC  994

seq1  TATTCTTTTGTCTTATTTTTCTCCCCCAAAACAAGAATGAATTC  1044
      ||||||||||||||||||||||||||||||||||||||||||||
seq2  TATTCTTTTGTCTTATTTTTCTCCCCCAAAACAAGAATGAATTC  1038