BAC Information

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BAC

Clone NameB6Ng01-174D14
Chromosome16 (Build37)
Map Location 13,847,701 - 13,848,781
singlet/doubletsinglet
Overlap genePdxdc1
Upstream geneLOC622553, Ercc4, Gt4-1, Mkl2, Parn, LOC100043196, 3110001I22Rik, Pla2g10, A930007A09Rik, LOC622757, Rrn3, Ntan1
Downstream geneMpv17l, Ifitm7, 2900011O08Rik, 4921513D23Rik, Nde1, Myh11, 0610037P05Rik, Abcc1, Gm1758, Snai2
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-174D14.bB6Ng01-174D14.g
ACCGA002363GA002364
length1,0081,081
definitionB6Ng01-174D14.b B6Ng01-174D14.g
singlet/doublet---singlet
BLAST hitno hit dataunique
sequence
gaattctgccaatttctgagtatatctatcccaattatacattctggaac
tggggaaatcaccacaggatgtgtccggggacctactggacctactgtga
gtcggacatcagtcaaaactccattaatcacctgccctccataagcccct
actttaactggagggccacaatgtttcttgggatcccctgggatcagtgt
caactcagaaccagtatccagcagaccccgaaaagtctgattatttcctt
ttccccagtgtacagttacccttgtaaaaggccgtaggtccctctgggga
agaactggagaaagggtaacagcaaaacctttgggtgtcttatcaagatc
cttcctcagcggaacctggccaccccttcattcaaggggttctggatctg
caaactgtctcaagtctggaaattgattcactggccgagattgctgttta
ccacgatctaatatagcctttctttcattgggctgtttaccacgatctaa
tgtagcctttcttccatttgtttgagaatttttctgcttatacagatcaa
acaaatatgcagtaggcttcctatgtatttcattcctggaaacaccatga
ttggttagccagtaccaaaggtccaaccgagtcatgccattataaatttc
acctctcctgtgctgaccattactgggtatgtttattataaacattcttt
tgtctacgctgtccattataataactagaatcaccttgttctccagcgat
ttcaatgctgccacctggccccttgttaccctcggaatcccaactaaacc
ccagttgaaatttaattcattctaatttgagcagaaagcatctcccaatg
cttaagatctggcacaagggaaaaggggaaaagaacaaaaccctttcaaa
tgtgctggtgcccctctcaccaatttgcgtcttataagctggtgaaaggc
atatcttctggaacttcccttgagacaatttatgcctttcccatatatcc
actcttgc
gaattcactctgtagatcaggctagtatcccagctcacagcctgcctctg
tctccctagtgctaggattaaaggcctatacctccacacctggcataaaa
aaatttttaatcacctacctgaggctggtaattcctggaaaaacctgaac
accactactggagaactgagctcatcttccacctgcaaaaagagaactgt
gctgttacaacactgaagatagggctaaacatcagcgggataagacagta
tctttggaaagaaaataggcagaaatgctgcttatacacaaacattaaaa
ggctcaaagggtgtaactggcctgaggtgaccaatgaaaatgatggtccc
tccctctcttgacccaacagactctatgaagtcatgcataaacgagcaac
ttaaaaaaaaaaagtgtatgagttaaccaagttatgcttggtacccacag
aggcccgaaaaggatactggatatcctggaaatggagtttcagaatagtg
tgagccattatataggtgctgagaaccaaacctgggtcttttgcaagaaa
agcaactgttcctaactgcagagtcatttcttcagcctaaatcaagaact
ttttatactcaggaatttaaaagaaaatctttcattatcttttataacag
aacaatatgagcaatgctcatactggcagcttaaaaactaccagggtatt
gtcagacgagtggctcaatgtctctcctaatagatgacaatgataacact
gcagagtagactgcattactctggcatcatgtacttccctctccacagtc
agccaaccaccaggctttaccacacaaccaagcaacaatctgaggcaggc
ttttttgttggggatcagctctggggatgctttctttcagtattaacaag
ttgtaatctatcactgaagctttgaatccttttgtaattaaattatgctg
tggctgataaacttatcagtaaaaccaccacaaggaagtttctatgcaca
cacaggagcagctggcccatcgaattttctaactttttaggtaattgttt
tgagaagaagaaggtttaactgtgtagctgg
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr16_13847701_13848781
seq2: B6Ng01-174D14.g_70_1150

seq1  GAATTCACTCTGTAGATCAGGCTAGTATCCCAGCTCACAGCCTGCCTCTG  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCACTCTGTAGATCAGGCTAGTATCCCAGCTCACAGCCTGCCTCTG  50

seq1  TCTCCCTAGTGCTAGGATTAAAGGCCTATACCTCCACACCTGGCATAAAA  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTCCCTAGTGCTAGGATTAAAGGCCTATACCTCCACACCTGGCATAAAA  100

seq1  AAATTTTTAATCACCTACCTGAGGCTGGTAATTCCTGGAAAAACCTGAAC  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAATTTTTAATCACCTACCTGAGGCTGGTAATTCCTGGAAAAACCTGAAC  150

seq1  ACCACTACTGGAGAACTGAGCTCATCTTCCACCTGCAAAAAGAGAACTGT  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACCACTACTGGAGAACTGAGCTCATCTTCCACCTGCAAAAAGAGAACTGT  200

seq1  GCTGTTACAACACTGAAGATAGGGCTAAACATCAGCGGGATAAGACAGTA  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCTGTTACAACACTGAAGATAGGGCTAAACATCAGCGGGATAAGACAGTA  250

seq1  TCTTTGGAAAGAAAATAGGCAGAAATGCTGCTTATACACAAACATTAAAA  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTTTGGAAAGAAAATAGGCAGAAATGCTGCTTATACACAAACATTAAAA  300

seq1  GGCTCAAAGGGTGTAACTGGCCTGAGGTGACCAATGAAAATGATGGTCCC  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGCTCAAAGGGTGTAACTGGCCTGAGGTGACCAATGAAAATGATGGTCCC  350

seq1  TCCCTCTCTTGACCCAACAGACTCTATGAAGTCATGCATAAACGAGCAAC  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCCTCTCTTGACCCAACAGACTCTATGAAGTCATGCATAAACGAGCAAC  400

seq1  TTAAAAAAAAAAAGTGTATGAGTTAACCAAGTTATGCTTGGTACCCACAG  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTAAAAAAAAAAAGTGTATGAGTTAACCAAGTTATGCTTGGTACCCACAG  450

seq1  AGGCCCGAAAAGGATACTGGATATCCTGGAAATGGAGTTTCAGAATAGTG  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGCCCGAAAAGGATACTGGATATCCTGGAAATGGAGTTTCAGAATAGTG  500

seq1  TGAGCCATTATATAGGTGCTGAGAACCAAACCTGGGTCTTTTGCAAGAAA  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGAGCCATTATATAGGTGCTGAGAACCAAACCTGGGTCTTTTGCAAGAAA  550

seq1  AGCAACTGTTCCTAACTGCAGAGTCATTTCTTCAGCCTAAATCAAGAACT  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGCAACTGTTCCTAACTGCAGAGTCATTTCTTCAGCCTAAATCAAGAACT  600

seq1  TTTTATACTCAGGAATTTAAAAGAAAATCTTTCATTATCTTTTATAACAG  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTTATACTCAGGAATTTAAAAGAAAATCTTTCATTATCTTTTATAACAG  650

seq1  AACAATATGAGCAATGCTCATACTGGCAGCTTAAAAACTACCAGGGTATT  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACAATATGAGCAATGCTCATACTGGCAGCTTAAAAACTACCAGGGTATT  700

seq1  GTCAGACGAGTGGCTCAATGTCTCTCCTAATAGATGACAATGATAACACT  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTCAGACGAGTGGCTCAATGTCTCTCCTAATAGATGACAATGATAACACT  750

seq1  GCAGAGTAGACTGCATTACTCTGGCATCATGTACTTCCCTCTCCACAGTC  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCAGAGTAGACTGCATTACTCTGGCATCATGTACTTCCCTCTCCACAGTC  800

seq1  AGCCAACCACCAGGCTTTACCACACAACCAAGCAACAATCTGAGGCAGGC  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGCCAACCACCAGGCTTTACCACACAACCAAGCAACAATCTGAGGCAGGC  850

seq1  TTTTTTGTT-GGGATCAGCTCTGGGGATGCTTTCTTTCAGTATTTAACAG  899
      ||||||||| |||||||||||||||||||||||||||||||||| |  ||
seq2  TTTTTTGTTGGGGATCAGCTCTGGGGATGCTTTCTTTCAGTATTAACAAG  900

seq1  TTGTAATCTATCACTGAAGCTTTGAATCCTTTTGTAATTAAATTATGCTG  949
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGTAATCTATCACTGAAGCTTTGAATCCTTTTGTAATTAAATTATGCTG  950

seq1  TGGCTGATAAACTTATCAGTAAAACCACAACAAGGAAGTTTCTATGCACA  999
      |||||||||||||||||||||||||||| |||||||||||||||||||||
seq2  TGGCTGATAAACTTATCAGTAAAACCACCACAAGGAAGTTTCTATGCACA  1000

seq1  CACAGGAAGCAGCTGGCCCATCGATTTTTCTAACTTTTTTTAGGTTATTG  1049
      |||||| ||||||||||||||||| |||||||||  ||||||||| ||||
seq2  CACAGG-AGCAGCTGGCCCATCGAATTTTCTAAC--TTTTTAGGTAATTG  1047

seq1  TTTTGAGA--GAGAAGGTTTTACTGTGTAGCTGG  1081
      ||||||||   ||||||||| |||||||||||||
seq2  TTTTGAGAAGAAGAAGGTTTAACTGTGTAGCTGG  1081