BAC Information

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BAC

Clone NameB6Ng01-174L06
Chromosome16 (Build37)
Map Location 61,276,156 - 61,276,394
singlet/doubletsinglet
Overlap genenone
Upstream geneEpha6, LOC100043804, EG668168, LOC668170, LOC100043524
Downstream geneLOC668183
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-174L06.bB6Ng01-174L06.g
ACCGA002705GA002706
length729522
definitionB6Ng01-174L06.b B6Ng01-174L06.g
singlet/doublet---singlet
BLAST hitno hit dataunique
sequence
gaattcccaacagagggatctgaatggccaagaagcactttaagcatgct
caacatccttagacatcagggaaatgcaaatcaaaaccaccttgagattc
cacctcacaccactcaaaatggctatgatcaaaagctctggtgacagcag
atgctggctaggatgcagagaaagaacactcctccattgttggtgggatt
gcaagctggtaaaaccactctgaaaaatcaatctgacagatcctcagaaa
attggaaatagatgtgcctccagacccagctataccaccattgggcatat
acccaaaagatgctccactatgttcctagcagccttatttgtaataatga
gaagctggaaaccacccagttgtccctcagccaaagaatggatgcagaaa
atgtggttcatttgccccacatcgaatactacttggatattaaaaatgag
ggtatcatgaatcatgcaggcaaatgcgtagaattagaaaatctcatcct
gaatctcaccagaaccaaaagacatgcatggtatctacttactcataagt
gggtattggccaaaaagttcagaattcccatgatacacctcacagactgg
aggaagcttacttaacaagaatgcaggcccatttgtggatatttcaaaca
cacttagacaagggatcaaaaataatcaccagaggcagagggagggacct
gggtgggagagggtaaaggtgggaaaagt
tgcattaaaaccatctgaccctgagctgttttggttgggagactttaaat
gactatttctatttctttaggagttatagggatatttaaatagttctctt
gatcttgatttaaatttggtaagtggttatctgtctctgcctacaaaatt
acccatttcattaaaacttttccagttttgtggaatacaggcctttgaag
taagacaatgattctttgaatttcgtcattgtctgttttttaaattggat
attttatttatttacattgcagatgttatccccttcctggaaggattctg
tcctaggctgctccttggttcttgtgtcctgagcactccagataggtccc
ttggagcaaaagtggtggtccttcctgggtcacaggtgtgtcagcactcc
tgggagaccatctctttcctggcaggacatgggtatggagaggtgtggca
caaggtcaactctggggcacagatgtcatagtctgtttttatgtctccct
tttatgtctgattttgttaatt
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr16_61276156_61276394
seq2: B6Ng01-174L06.g_103_596 (reverse)

seq1  --------------------------------------------------  0
                                                        
seq2  AATTAACAAAATCAGACATAAAAGGGAGACATAAAAACAGACTATGACAT  50

seq1  --------------------------------------------------  0
                                                        
seq2  CTGTGCCCCAGAGTTGACCTTGTGCCACACCTCTCCATACCCATGTCCTG  100

seq1  --------------------------------------------------  0
                                                        
seq2  CCAGGAAAGAGATGGTCTCCCAGGAGTGCTGACACACCTGTGACCCAGGA  150

seq1  --------------------------------------------------  0
                                                        
seq2  AGGACCACCACTTTTGCTCCAAGGGACCTATCTGGAGTGCTCAGGACACA  200

seq1  --------------------------------------AATTAACAAAAT  12
                                            |    | || ||
seq2  AGAACCAAGGAGCAGCCTAGGACAGAATCCTTCCAGGAAGGGGATAACAT  250

seq1  CAGAAATGAAAAGGGAGACA-----------TAACAACATATTCTGAAGA  51
      | | |||| |||   | | |            || |||| |   ||| ||
seq2  CTGCAATGTAAATAAATAAAATATCCAATTTAAAAAACAGACAATGACGA  300

seq1  AATCCAAAACACCATCAGATCCTTCTACAAAAGGCTATACTCAACAAAAC  101
      ||| ||||  | |||    || | || |||| | || || || |||||||
seq2  AATTCAAAGAATCAT--TGTCTTACTTCAAAGGCCTGTATTCCACAAAAC  348

seq1  TGGAGAA-CCTAGATGAAATGGACAAGTTTCT------AGACAGAT-ACC  143
      |||| ||   |  |||||||||  || ||| |      |||||||| |||
seq2  TGGAAAAGTTTTAATGAAATGGGTAATTTTGTAGGCAGAGACAGATAACC  398

seq1  AGGTACCAAAGTTAACTCAAGATCAGGTTAATGATCTAAACAGGCCTATA  193
      |  ||||||| |||| ||||||||| |  ||  || |||| |  ||||||
seq2  ACTTACCAAATTTAAATCAAGATCAAGAGAACTATTTAAATATCCCTATA  448

seq1  TCCCCTAAAGAAATAGAAGTAGTCATTAATAGTCTCCCAACCAAAA  239
       | ||||||||||||||| |||||||| | ||||||||||||||||
seq2  ACTCCTAAAGAAATAGAAATAGTCATTTAAAGTCTCCCAACCAAAA  494