BAC Information

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BAC

Clone NameB6Ng01-175K24
Chromosome16 (Build37)
Map Location 81,528,666 - 81,529,701
singlet/doubletsinglet
Overlap geneNcam2
Upstream geneLOC621365, LOC100039724
Downstream geneLOC621470, LOC435484, Pgk1-ps1
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-175K24.bB6Ng01-175K24.g
ACCGA003427GA003428
length1,0521,036
definitionB6Ng01-175K24.b B6Ng01-175K24.g
singlet/doublet---singlet
BLAST hitno hit dataunique
sequence
ggaattccttcactcaggattctagttccatccaaagatgtgttccagag
atagcctaacttgtaccttatgtggtgatatgtacgagtcacccaggtga
cactggttttgaagaaatcaagagcaactgagacttggtactgttagagg
ccatgggagctcactgttgaaggtgaaacctcagttcagttgatagctca
ggattggaaggggtcatgcaaaggagttgaggcttggaaccatgaagaga
gcctatgagaggctattggtgaagcctagttccagccaaagaccccagtg
tattagagatgtgagtaccatgggatgatcgtcaagaacagcagaggcag
tggagtggatcaacctgatatgagtgccacagagggcagagctgaagaag
atgtcagccctttggaggagcccagaagatcatgtgtggatcccagacat
tgaaacaggaagctgtaacactgaagttcccttggagaccctaaaatgtt
taagatatgagagccatgggctgtctgctggggaaaacagctaacagagt
agaactagcccaacagaaaaaaggtttttttttttttttttttttttttg
cagtcaccaaaaatgaaaaaggaggtggaaatctgaagtctgctttgaca
tcagacatggagctgcagactttggactttgtccagctggtttccagtct
tgctttggggattacaattaagtgattagatgaatttcagaagagacttt
gaattttgaactttcaacattgttgagactgctatagactctagggactt
gggaagttggactaaatgtatttgcattatgttgtatgtttagggtatgt
cctctatagattcacgtgtttgaacaacccctatgggggcccagcaagtt
ggaatgtgatggtttgtatatgttgggcccaaggagggacactattagag
gtttagctggttgcagttcgtgtatcactgtgggtcttaggcctaattcc
aacttcctagctcttgggaagttagtattctgctagctagtcttctcgat
ga

gaattcactctttagaccaggctggccttgaactcagaattcagcctgtc
tctgcctccaaagtgctgggtttaaaggtgtatgccaccactgcccggca
tgaagagctcttttgtataaatcacaaagatctacatcacaatgtttgtt
ttgtttgtttgtttgtttgtttattttgatctccattctccggctgccat
tacatagatggagctagagcatttgggtatcctctgagcccaggccatta
acagattatgaagaacgtcctgggaagagtttgaaaactggaaaattggt
ttgcttcagccaagtatgtagtgaggtttcttgctgactgtcatgggcaa
ataacttaatacagtcctttggtctttttttactccctgattcacgtcaa
ttcatttcaatcgtctatgggaagaccatgattactcatgcatctttgtg
agcctgtgaggcccatagtcctttcaacaaggcaacctgaggcctctggc
ctgaagtctacgtccatagctaacattgtattattttttttttattcata
cactaactaaaagttttaaatctgaactaatttcattcatcttaaaatac
tgttggaatttaaaatgtttgtattgagtggtttaatctctagtaaaaat
tacttagaacatagctttcatttgtaatcatctaattcatcttcttaaaa
taagcacagaggagtcaaaaaggcttaccagggcctaggcataaatataa
ccaaatgtagatggaccacagacttcctcattttcccttaattttactgt
cctttgagctttctaactttattgtaaatattttgtctatgaaataattt
gtcttctatgaaagttccagccactacatttagctctcattatcagttta
attcatttatttttgtgtatgttgatacactcttttcttttgttggtaat
tgatactacatattgttcttatctctgcctaattactaattcacggttca
taattaacatctctttgcttacatttttacaggaga
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr16_81528666_81529701
seq2: B6Ng01-175K24.g_62_1097

seq1  GAATTCACTCTTTAGACCAGGCTGGCCTTGAACTCAGAATTCAGCCTGTC  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCACTCTTTAGACCAGGCTGGCCTTGAACTCAGAATTCAGCCTGTC  50

seq1  TCTGCCTCCAAAGTGCTGGGTTTAAAGGTGTATGCCACCACTGCCCGGCA  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTGCCTCCAAAGTGCTGGGTTTAAAGGTGTATGCCACCACTGCCCGGCA  100

seq1  TGAAGAGCTCTTTTGTATAAATCACAAAGATCTACATCACAATGTTTGTT  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGAAGAGCTCTTTTGTATAAATCACAAAGATCTACATCACAATGTTTGTT  150

seq1  TTGTTTGTTTGTTTGTTTGTTTATTTTGATCTCCATTCTCCGGCTGCCAT  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGTTTGTTTGTTTGTTTGTTTATTTTGATCTCCATTCTCCGGCTGCCAT  200

seq1  TACATAGATGGAGCTAGAGCATTTGGGTATCCTCTGAGCCCAGGCCATTA  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TACATAGATGGAGCTAGAGCATTTGGGTATCCTCTGAGCCCAGGCCATTA  250

seq1  ACAGATTATGAAGAACGTCCTGGGAAGAGTTTGAAAACTGGAAAATTGGT  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACAGATTATGAAGAACGTCCTGGGAAGAGTTTGAAAACTGGAAAATTGGT  300

seq1  TTGCTTCAGCCAAGTATGTAGTGAGGTTTCTTGCTGACTGTCATGGGCAA  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGCTTCAGCCAAGTATGTAGTGAGGTTTCTTGCTGACTGTCATGGGCAA  350

seq1  ATAACTTAATACAGTCCTTTGGTCTTTTTTTACTCCCTGATTCACGTCAA  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATAACTTAATACAGTCCTTTGGTCTTTTTTTACTCCCTGATTCACGTCAA  400

seq1  TTCATTTCAATCGTCTATGGGAAGACCATGATTACTCATGCATCTTTGTG  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCATTTCAATCGTCTATGGGAAGACCATGATTACTCATGCATCTTTGTG  450

seq1  AGCCTGTGAGGCCCATAGTCCTTTCAACAAGGCAACCTGAGGCCTCTGGC  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGCCTGTGAGGCCCATAGTCCTTTCAACAAGGCAACCTGAGGCCTCTGGC  500

seq1  CTGAAGTCTACGTCCATAGCTAACATTGTATTATTTTTTTTTTATTCATA  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGAAGTCTACGTCCATAGCTAACATTGTATTATTTTTTTTTTATTCATA  550

seq1  CACTAACTAAAAGTTTTAAATCTGAACTAATTTCATTCATCTTAAAATAC  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACTAACTAAAAGTTTTAAATCTGAACTAATTTCATTCATCTTAAAATAC  600

seq1  TGTTGGAATTTAAAATGTTTGTATTGAGTGGTTTAATCTCTAGTAAAAAT  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTTGGAATTTAAAATGTTTGTATTGAGTGGTTTAATCTCTAGTAAAAAT  650

seq1  TACTTAGAACATAGCTTTCATTTGTAATCATCTAATTCATCTTCTTAAAA  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TACTTAGAACATAGCTTTCATTTGTAATCATCTAATTCATCTTCTTAAAA  700

seq1  TAAGCACAGAGGAGTCAAAAAGGCTTACCAGGGCCTAGGCATAAATATAA  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAAGCACAGAGGAGTCAAAAAGGCTTACCAGGGCCTAGGCATAAATATAA  750

seq1  CCAAATGTAGATGGACCACAGACTTCCTCATTTTCCCTTAATTTTACTGT  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCAAATGTAGATGGACCACAGACTTCCTCATTTTCCCTTAATTTTACTGT  800

seq1  CC-TTGAGCTTTCTAACTTTATTGTAAATATTTTGTCTATGAAATAATTT  849
      || |||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTTTGAGCTTTCTAACTTTATTGTAAATATTTTGTCTATGAAATAATTT  850

seq1  GTCTTCTATGAAAGTTCCAGCCACTACATTTAGCTCTCATTATCAGTTTA  899
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTCTTCTATGAAAGTTCCAGCCACTACATTTAGCTCTCATTATCAGTTTA  900

seq1  ATTCATTTATTTTTGTGTATGTTGATACACTCTTTTCTTTTGTTGGTAAA  949
      ||||||||||||||||||||||||||||||||||||||||||||||| ||
seq2  ATTCATTTATTTTTGTGTATGTTGATACACTCTTTTCTTTTGTTGGT-AA  949

seq1  TTGATACTACATATTGTTCTTATCTCTGTCTAATTACTAATTTCACGGTT  999
      |||||||||||||||||||||||||||| ||||||||||| |||||||||
seq2  TTGATACTACATATTGTTCTTATCTCTGCCTAATTACTAA-TTCACGGTT  998

seq1  CATAATTAAAACATCTC-TTGC-TACA-TTTTACAGGAGA  1036
      |||||||  |||||||| |||| |||| ||||||||||||
seq2  CATAATT--AACATCTCTTTGCTTACATTTTTACAGGAGA  1036


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