BAC Information

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BAC

Clone NameB6Ng01-177A12
Chromosome16 (Build37)
Map Location 70,693,784 - 70,817,263
singlet/doubletdoublet
Overlap genenone
Upstream geneSpeer2, EG664930, Gbe1, D16Ertd519e
Downstream geneLOC100039231
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-177A12.bB6Ng01-177A12.g
ACCGA004413GA004414
length9851,076
definitionB6Ng01-177A12.b B6Ng01-177A12.g
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(70,816,270 - 70,817,263)(70,693,784 - 70,694,870)
sequence
gaattcttcagactttcaaatatatgtaaatgatgacataaaatatccag
accaatagagaaatctccaaaatttcttttttttttcttttttttaagat
ttattttattatatgagtacactgtacctgtcttcagacataccagaaga
gggcaccagattccagtatagatggttctgaggccacatgccgttgctag
gaattgaactcagctcaaagagcagccagtgctcttaaccactgagccat
ctctctagcccttctccaaaacttaagtccaaattaagaaatattgttca
gtaaaaatgaaggaggggaaaatattagataacgcagaacagtggtaagg
ttatttccagtgtcccactggtacagcagcacccaacaatctagtaggct
gaggcagggatattgttcatcatgtgtatgatgctagtcttatcaactta
gttccaacacctaaagaaagaaagaaagaaagaaagttcttctctcaagg
cagaaggatgtggaagtaatggaaacaagtgatttaaataaaataatagc
tcgcacaaacctgagaaaaaaggcatggattaaagaaaaattgttgaggt
tctgtcttttactctgtattctattgctaagtgcagccccccaaaaaaga
gagtctgcatgtagactcaagtgagctgtgtgaccttgcccccaagctat
ctataattgggaaataaagatgctgaaagccaacagctaggcagaagaga
cataggaggggtatagagttccagagcttggcagtcagaagacaactaca
agagggggaaaaggcgagaaggagagagaagcttccatggttagtgagtc
atgaaaatgtggccctgagaccagccaattggagtagagcagtccagata
aaaacatagtattagtaacacagttaccataggaaagtagattgttaaca
tagagggtttttatctgcccagttcttgtgctgtt

gaattcaggttagcaagtttgatcctatatagtggaagagagacacccaa
tctcacaagttgtcctctgatgtccacaaaatgctatgacacacatacac
acacacacacacacacacacacacacagacatacagacacacacacacac
acaaacacacagacatacagacatacatacacacaaacactaagacatac
agacacacacacacaaacacacagacatacacacacacacacacaaacac
acagatagagacacagacagacagacagaaacagacaaagacagatagga
agagaaacacagacgatgtagaaaataagcaaaatatagttttttaaaag
tgagatatcagtttacagtcaaggtaagttaaagttgttaaaacacaaat
atacatttgttaaaattttgctgggcaggggtggcgcacacctttaatcc
cagcgcttgggaggcagaggcatgtggatttctgagttcgaggccagcct
ggtctacagagtgagttccaggacagccagggctatacagagaaactctg
tcttgaaaaaccaaaccaaaagaaaaaaaaattgaaacaatcttcaagaa
aaaaatttagttcaagttattaaaaatcaagttgagttctaaaagtattc
tttcatgttttcgtcaaaatatgactctaatgtatttctgttttctgccc
attgaatagttttctatacttcaatcccaagagaaaaacattgatactgt
tgttgatttacatattttagcacactttccccatcccctacaagacattg
agaaataacttatcagacgcacacagctgcatacgggatatgtctctaag
tgttttgcttgtgtctgtcacttccctgtcagtaacaattctcctcactc
ctcctcaggaaaacattgttctcttccttctgaacacaattttggtccca
actggttaggtattttatcctcaagttgttgtcccaatcctgcatcatta
cccagtgtcagtcagttcacatattgattcagccatctcagtccttgtgc
tgccacgtcagcggaggtgattgctt
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr16_70816270_70817263
seq2: B6Ng01-177A12.b_44_1028 (reverse)

seq1  AACAGCACAAGAACTGGGCAGATAAAAACCCTCTATGTTAACAATCTACT  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACAGCACAAGAACTGGGCAGATAAAAACCCTCTATGTTAACAATCTACT  50

seq1  TTCCTATTGGTAACCTTGTGTTACTAATTACTATG-TTTTATCTGGACTG  99
      |||||| |||||||  ||||||||||| ||||||| ||||||||||||||
seq2  TTCCTA-TGGTAAC--TGTGTTACTAA-TACTATGTTTTTATCTGGACTG  96

seq1  CTCTTAACTCCAATTGGCTGGTCCTCAGGGCCACATTTTCATGACTCACC  149
      ||||  |||||||||||||||| ||||||||||||||||||||||||| |
seq2  CTCT--ACTCCAATTGGCTGGT-CTCAGGGCCACATTTTCATGACTCA-C  142

seq1  TAACCCATGGAAGCTTCTCTCTCCTTCTCGCCTTTTTCCCCCTCTTGTAG  199
      ||| |||||||||||||||||||||||||||| |||||||||||||||||
seq2  TAA-CCATGGAAGCTTCTCTCTCCTTCTCGCC-TTTTCCCCCTCTTGTAG  190

seq1  TTGTCTTCTGACTGCCAAGCTCTGGAACTCTATACCCCTCCTATGTCTCT  249
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGTCTTCTGACTGCCAAGCTCTGGAACTCTATACCCCTCCTATGTCTCT  240

seq1  TCTGCCTAGCTGTTGGCTTTCAGCATCTTTATTTCCCAATTATAGATAGC  299
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTGCCTAGCTGTTGGCTTTCAGCATCTTTATTTCCCAATTATAGATAGC  290

seq1  TTGGGGGCAAGGTCACACAGCTCACTTGAGTCTACATGCAGACTCTCTTT  349
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGGGGGCAAGGTCACACAGCTCACTTGAGTCTACATGCAGACTCTCTTT  340

seq1  TTTGGGGGGCTGCACTTAGCAATAGAATACAGAGTAAAAGACAGAACCTC  399
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTGGGGGGCTGCACTTAGCAATAGAATACAGAGTAAAAGACAGAACCTC  390

seq1  AACAATTTTTCTTTAATCCATGCCTTTTTTCTCAGGTTTGTGCGAGCTAT  449
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACAATTTTTCTTTAATCCATGCCTTTTTTCTCAGGTTTGTGCGAGCTAT  440

seq1  TATTTTATTTAAATCACTTGTTTCCATTACTTCCACATCCTTCTGCCTTG  499
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATTTTATTTAAATCACTTGTTTCCATTACTTCCACATCCTTCTGCCTTG  490

seq1  AGAGAAGAACTTTCTTTCTTTCTTTCTTTCTTTAGGTGTTGGAACTAAGT  549
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAGAAGAACTTTCTTTCTTTCTTTCTTTCTTTAGGTGTTGGAACTAAGT  540

seq1  TGATAAGACTAGCATCATACACATGATGAACAATATCCCTGCCTCAGCCT  599
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGATAAGACTAGCATCATACACATGATGAACAATATCCCTGCCTCAGCCT  590

seq1  ACTAGATTGTTGGGTGCTGCTGTACCAGTGGGACACTGGAAATAACCTTA  649
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTAGATTGTTGGGTGCTGCTGTACCAGTGGGACACTGGAAATAACCTTA  640

seq1  CCACTGTTCTGCGTTATCTAATATTTTCCCCTCCTTCATTTTTACTGAAC  699
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCACTGTTCTGCGTTATCTAATATTTTCCCCTCCTTCATTTTTACTGAAC  690

seq1  AATATTTCTTAATTTGGACTTAAGTTTTGGAGAAGGGCTAGAGAGATGGC  749
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATATTTCTTAATTTGGACTTAAGTTTTGGAGAAGGGCTAGAGAGATGGC  740

seq1  TCAGTGGTTAAGAGCACTGGCTGCTCTTTGAGCTGAGTTCAATTCCTAGC  799
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCAGTGGTTAAGAGCACTGGCTGCTCTTTGAGCTGAGTTCAATTCCTAGC  790

seq1  AACGGCATGTGGCCTCAGAACCATCTATACTGGAATCTGGTGCCCTCTTC  849
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACGGCATGTGGCCTCAGAACCATCTATACTGGAATCTGGTGCCCTCTTC  840

seq1  TGGTATGTCTGAAGACAGGTACAGTGTACTCATATAATAAAATAAATCTT  899
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGTATGTCTGAAGACAGGTACAGTGTACTCATATAATAAAATAAATCTT  890

seq1  AAAAAAAAGAAAAAAAAAAGAAATTTTGGAGATTTCTCTATTGGTCTGGA  949
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAAAAAAGAAAAAAAAAAGAAATTTTGGAGATTTCTCTATTGGTCTGGA  940

seq1  TATTTTATGTCATCATTTACATATATTTGAAAGTCTGAAGAATTC  994
      |||||||||||||||||||||||||||||||||||||||||||||
seq2  TATTTTATGTCATCATTTACATATATTTGAAAGTCTGAAGAATTC  985


seq1: chr16_70693784_70694870
seq2: B6Ng01-177A12.g_64_1139

seq1  GAATTCAGGTTAGCAAGTTTGATCCTATATAGTGGAAGAGAGACACCCAA  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCAGGTTAGCAAGTTTGATCCTATATAGTGGAAGAGAGACACCCAA  50

seq1  TCTCACAAGTTGTCCTCTGATGTCCACAAAATGCTATGACACACATACAC  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTCACAAGTTGTCCTCTGATGTCCACAAAATGCTATGACACACATACAC  100

seq1  ACACACACACACACACACACACACACAGACATACAGACACACACACACAC  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACACACACACACACACACACACACACAGACATACAGACACACACACACAC  150

seq1  ACAAACACACAGACATACAGACATACATACACACAAACACTAAGACATAC  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACAAACACACAGACATACAGACATACATACACACAAACACTAAGACATAC  200

seq1  AGACACACACACACAAACACACAGACATACACACACACACACACAAACAC  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGACACACACACACAAACACACAGACATACACACACACACACACAAACAC  250

seq1  ACAGATAGAGACACAGACAGACAGACAGAAACAGACAAAGACAGATAGGA  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACAGATAGAGACACAGACAGACAGACAGAAACAGACAAAGACAGATAGGA  300

seq1  AGAGAAACACAGACGATGTAGAAAATAAGCAAAATATAGTTTTTTAAAAG  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAGAAACACAGACGATGTAGAAAATAAGCAAAATATAGTTTTTTAAAAG  350

seq1  TGAGATATCAGTTTACAGTCAAGGTAAGTTAAAGTTGTTAAAACACAAAT  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGAGATATCAGTTTACAGTCAAGGTAAGTTAAAGTTGTTAAAACACAAAT  400

seq1  ATACATTTGTTAAAATTTTGCTGGGCAGGGGTGGCGCACACCTTTAATCC  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATACATTTGTTAAAATTTTGCTGGGCAGGGGTGGCGCACACCTTTAATCC  450

seq1  CAGCGCTTGGGAGGCAGAGGCATGTGGATTTCTGAGTTCGAGGCCAGCCT  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGCGCTTGGGAGGCAGAGGCATGTGGATTTCTGAGTTCGAGGCCAGCCT  500

seq1  GGTCTACAGAGTGAGTTCCAGGACAGCCAGGGCTATACAGAGAAACTCTG  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGTCTACAGAGTGAGTTCCAGGACAGCCAGGGCTATACAGAGAAACTCTG  550

seq1  TCTTGAAAAACCAAACCAAAAGAAAAAAAAATTGAAACAATCTTCAAGAA  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTTGAAAAACCAAACCAAAAGAAAAAAAAATTGAAACAATCTTCAAGAA  600

seq1  AAAAATTTAGTTCAAGTTATTAAAAATCAAGTTGAGTTCTAAAAGTATTC  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAAATTTAGTTCAAGTTATTAAAAATCAAGTTGAGTTCTAAAAGTATTC  650

seq1  TTTCATGTTTTCGTCAAAATATGACTCTAATGTATTTCTGTTTTCTGCCC  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTCATGTTTTCGTCAAAATATGACTCTAATGTATTTCTGTTTTCTGCCC  700

seq1  ATTGAATAGTTTTCTATACTTCAATCCCAAGAG-AAAACATTGATACTGT  749
      ||||||||||||||||||||||||||||||||| ||||||||||||||||
seq2  ATTGAATAGTTTTCTATACTTCAATCCCAAGAGAAAAACATTGATACTGT  750

seq1  TGTTGATTTACATATTTTAGCACAC-TTCCCCATCCCCTACAAAGACAAT  798
      ||||||||||||||||||||||||| ||||||||||||||| ||||| ||
seq2  TGTTGATTTACATATTTTAGCACACTTTCCCCATCCCCTAC-AAGAC-AT  798

seq1  TGAGAAATAAC-TATCAGAACGCACACAGCTGCATACGGGATAATGTCTC  847
      ||||||||||| |||||| ||||||||||||||||||||||| |||||||
seq2  TGAGAAATAACTTATCAG-ACGCACACAGCTGCATACGGGAT-ATGTCTC  846

seq1  TAAGTGTTTTGCTTGTGTCTGTCACTTCCCTGTCAGT-ACAATTCTCCTC  896
      ||||||||||||||||||||||||||||||||||||| ||||||||||||
seq2  TAAGTGTTTTGCTTGTGTCTGTCACTTCCCTGTCAGTAACAATTCTCCTC  896

seq1  ACTCCTCCTCAGGAAAACAT--GTCTC-TCCTTCTGAACACAATTTTGGT  943
      ||||||||||||||||||||   |||| ||||||||||||||||||||| 
seq2  ACTCCTCCTCAGGAAAACATTGTTCTCTTCCTTCTGAACACAATTTTGG-  945

seq1  TCCCAACTGTGTTAAGTAATTTAT-CTCCAGTTGTTGTCCCAAATCCTGC  992
      ||||||||| |||| ||| ||||| ||| |||||||||||| ||||||||
seq2  TCCCAACTG-GTTAGGTATTTTATCCTCAAGTTGTTGTCCC-AATCCTGC  993

seq1  ATCAAATTACCCAAGTTGTCAGTCAGGTTTCCACATATTGATTCAGCCAT  1042
      |||  ||||||||   ||||||||||   | |||||||||||||||||||
seq2  ATC--ATTACCCA--GTGTCAGTCAG---TTCACATATTGATTCAGCCAT  1036

seq1  CTCAGTCCCCTGTGCTGCCCAGCTCCAGCGGAGGGTTGATTGCTT  1087
      |||||| || |||||||||   |  |||||||||  |||||||||
seq2  CTCAGT-CCTTGTGCTGCC--ACGTCAGCGGAGG--TGATTGCTT  1076


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