BAC Information

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BAC

Clone NameB6Ng01-181H24
Chromosome16 (Build37)
Map Location 58,061,802 - 58,062,564
singlet/doubletsinglet
Overlap geneLOC100043477
Upstream gene2310005G13Rik, Tomm70a, Nit2, Tbc1d23, Tmem30c, 2610528E23Rik, 4631422O05Rik, Col8a1, LOC435480, LOC629342
Downstream geneDcbld2, St3gal6, LOC100043480, Gm813, E330017A01Rik, Cpox, LOC100043790, Gpr15, Cldnd1, Olfr172, Olfr173, Olfr174, Olfr178, Olfr180, Olfr1563-ps1, Olfr181, Olfr182-ps1, Olfr183, Olfr185-ps1, Olfr186, Olfr187, Olfr188-ps1
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-181H24.bB6Ng01-181H24.g
ACCGA007645GA007646
length1,206773
definitionB6Ng01-181H24.b B6Ng01-181H24.g
singlet/doublet---singlet
BLAST hitno hit dataunique
sequence
gaattcacaaatgggacctaatgaaactccaaagtttctgcaagggaaaa
gacaccgtcaataagacaaaaagaccaccaacagattgggaaaggatctt
tacctatcctaaatcagataggggactaatatccaacatatataaagaac
tcaagattgtggacttcagaaaatcaaataaccccattaaaaaatggggc
tcagaactgaacaaagaattctcacctgaggaataccgaatggcagagaa
acacctgaaaaaatgttcaacatccttaatcatcagggaaatgcaaatca
aaacaaccctgagattccacctcacaccagtcagaatggctaagatcaaa
aattcaggtgacagcagatgctggcgtggatgtggagaaagaggaacact
cctccactgttggtgggagtgcaggcttgtacaaccactctggaaatcag
tctggcggttcctcagaaaagtggacatagtactaccggaggatccagca
atacctctcctgggcatatatccagaagatgccccaactggtaagaagga
cacatgctccactatgttcatagcagccttatttataatagccagaagct
ggaaagaacccagatgcccctcaacagaggaatggatacagaaaatgtgg
tacatctacacaatggagtactactcagctattaaaaagaatgaatttat
gaaattcctaggcaaatggatggacctggagggcatcatcctgagtgagg
taacacattcacaaagaaactcacacaatatgtactcactgataagtgga
tattagcccaaaacctaggatacccaagatataagatataatttgctaaa
cacatgaaactcaagaagaatgaagactgaagtgtggacactatgcccct
ccttagatttgggaacaaacacccatggaaggagttacagagacaaagtt
tggagctgagatgaaaggatggaccatgtagagactgccatatccaggga
tccaccccataatcagcatccaacgctgacaccaattgtatacactagca
agattttatgaaagaccagaatgtagctgtcctcttgtgagactatgctg
gcctagccaacacagagtgatgcctcacaggtcagctaatggatggatca
taagattccatgagagctaggaaagtagctaagagacttaagcgaattct
cgtgca
gaattccaggaccaggaagcagaagtgggtgggttggggagcagggtagg
gggaggctttggggatagcatttgaaatgtaaatgaagaaaatatctaat
aaaaaaataaattgaaaataaagaaaatttatgcttggtttagacattca
tatgataaaataatcatgttttcagatagcataataagtcttatctaata
tatgtatcactacaaagtgcttaacagagagttcattcaaatatcaacac
acatgatcattctccacatgagtgatattccacccagcgagcaaagctgc
gacacaattaaactcaaaagaacaacagactaatctggtgctttcgggga
acgtatattattggcctgcttttaatgtagacataatctttccacagacc
ctggtcaatttctttatgaaattccattcttcatacttttctatacaatg
ataataccacacccagactctgtcttgttcatgaaaagattgtgtaaatg
cagagccaaactatccatcaagtgatgatttggtatgtcagtatgctttg
ataaatgaacagttctccaattgtaatagacttttctgcaagaatataac
atgattaaatatttggaaatatttatccaaaccatcttacaaatcttgaa
aacatgactattgggaaacatttttactccctaacaaaatatcatgttgt
ctgggatatctaagaaagaattttctttttaatattggacattatttcct
aagctgatgaaagaatttggttg
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr16_58061802_58062564
seq2: B6Ng01-181H24.g_66_838

seq1  GAATTCCAGGACCAGGAAGCAGAAGTGGGTGGGTTGGGGAGCAGGGTAGG  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCCAGGACCAGGAAGCAGAAGTGGGTGGGTTGGGGAGCAGGGTAGG  50

seq1  GGGAGGCTTTGGGGATAGCATTTGAAATGTAAATGAAGAAAATATCTAAT  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGGAGGCTTTGGGGATAGCATTTGAAATGTAAATGAAGAAAATATCTAAT  100

seq1  AAAAAAATAAATTGAAAATAAAGAAAATTTATGCTTGGTTTAGACATTCA  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAAAAATAAATTGAAAATAAAGAAAATTTATGCTTGGTTTAGACATTCA  150

seq1  TATGATAAAATAATCATGTTTTCAGATAGCATAATAAGTCTTATCTAATA  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATGATAAAATAATCATGTTTTCAGATAGCATAATAAGTCTTATCTAATA  200

seq1  TATGTATCACTACAAAGTGCTTAACAGAGAGTTCATTCAAATATCAACAC  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATGTATCACTACAAAGTGCTTAACAGAGAGTTCATTCAAATATCAACAC  250

seq1  ACATGATCATTCTCCACATGAGTGATATTCCACCCAGCGAGCAAAGCTGC  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACATGATCATTCTCCACATGAGTGATATTCCACCCAGCGAGCAAAGCTGC  300

seq1  GACACAATTAAACTCAAAAGAACAACAGACTAATCTGGTGCTTTCGGGGA  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GACACAATTAAACTCAAAAGAACAACAGACTAATCTGGTGCTTTCGGGGA  350

seq1  ACGTATATTATTGGCCTGCTTTTAATGTAGACATAATCTTTCCACAGACC  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACGTATATTATTGGCCTGCTTTTAATGTAGACATAATCTTTCCACAGACC  400

seq1  CTGGTCAATTTCTTTATGAAATTCCATTCTTCATACTTTTCTATACAATG  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGGTCAATTTCTTTATGAAATTCCATTCTTCATACTTTTCTATACAATG  450

seq1  ATAATACCACACCCAGACTCTGTCTTGTTCATGAAAAGATTGTGTAAATG  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATAATACCACACCCAGACTCTGTCTTGTTCATGAAAAGATTGTGTAAATG  500

seq1  CAGAGCCAAACTATCCATCAAGTGATGATTTGGTATGTCAGTATGC-TTG  549
      |||||||||||||||||||||||||||||||||||||||||||||| |||
seq2  CAGAGCCAAACTATCCATCAAGTGATGATTTGGTATGTCAGTATGCTTTG  550

seq1  ATAAATGAACAGTTCTCCAATTGTAATAGACTTTTCTGCAAGAATATAAC  599
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATAAATGAACAGTTCTCCAATTGTAATAGACTTTTCTGCAAGAATATAAC  600

seq1  ATGATTAAATATTT-GAAATATTTATCCAAACCATCTTAC-AATCTTG-A  646
      |||||||||||||| ||||||||||||||||||||||||| ||||||| |
seq2  ATGATTAAATATTTGGAAATATTTATCCAAACCATCTTACAAATCTTGAA  650

seq1  AACATGACTATTGGGAAACATTTTTACT-CCTAACAAAATATCATG-TGT  694
      |||||||||||||||||||||||||||| ||||||||||||||||| |||
seq2  AACATGACTATTGGGAAACATTTTTACTCCCTAACAAAATATCATGTTGT  700

seq1  CTGGATAAACTATG-AAGAA-TTTCCTTTTAATATTGGACA-TATTTTCT  741
      ||||   | ||| | ||||| |||| ||||||||||||||| ||||| ||
seq2  CTGGGATATCTAAGAAAGAATTTTCTTTTTAATATTGGACATTATTTCCT  750

seq1  AAGCTGATG-AAGAATTTGGTTG  763
      ||||||||| |||||||||||||
seq2  AAGCTGATGAAAGAATTTGGTTG  773