BAC Information

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BAC

Clone NameB6Ng01-182D19
Chromosome16 (Build37)
Map Location 42,998,198 - 43,123,842
singlet/doubletdoublet
Overlap genenone
Upstream geneLsamp, Gap43, BC002163
Downstream geneLOC667484, Zbtb20, LOC100043314, Drd3, Qtrtd1, 2610015P09Rik, Zdhhc23, Gramd1c, Atp6v1a
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-182D19.bB6Ng01-182D19.g
ACCGA008186GA008187
length1,1991,109
definitionB6Ng01-182D19.b B6Ng01-182D19.g
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(43,122,608 - 43,123,842)(42,998,198 - 42,999,298)
sequence
gaattctctccttaggtaaatgagtcccttcctgacagctgtgggaagac
gtgcttgtgccaccaggcctttcagagaattatgcctgaaatgactaatg
attaaaataagataaaatcaaatccaaacacacacacacacacacacaca
cacacacacacacacacacacacacaccactaggttacagacagaaacag
ttgtggatagaatggcacatcaagcttgctgtaaacattctagtattttt
aaagaggtgtggagcactggaatacaatctaggaaatgccctgagttacg
agtttttgactcttgattttattttattttattttattttattttatttt
attttattttattttattttatttttgagacagggtttctccatgtagcc
ctggctgtccactctgtagaccaggcagacctcgaactcagaaatctgcc
tgcctctacctcccaagtgcttaaaggcgtgtgccaccactgcctggcga
ctcttgattttaatttctacaatttccttgtgtagctgtgtggcttacca
aaatgacttcacctctctggatttctgatttttcatatttaaaatgaggg
ggttgattactaaatgatatttaagagcccttctagagatacaaaattcc
tagccaacaacaacaacaataataataataataaacaacattagctggtg
cttcagcatgcgtgaaggatgtctacatgtctgattggttctgcatgcca
gtgctgagatagtattagtgtgattgtgcccatctttagaggagagatta
agaaaccacaaaatggtagagctggcattgaacagatgttcccaaggagg
aaaataccccttcagtaaaagaagcagctgatgctaacaaaggataacta
acagcagataatttagagcgtagctcttgtttagggtacagcgattctag
atgctgcattgggggatgatatctaccatgtggaatgtatctgatgatgt
attatcaaaaaaactattaaaagaaaataaaaagatacataattgtactg
cactacaccctaatgatattgttcaggtcccacaaaaaaagtaattatac
tcggcttatgttatgattattatattttattccaaggatgtaattaagct
cctggatagatcttaatccttagcatttggcattcaattccaagtaaag
gaattcacatatgtgccatctgagtattgatccacatgcatgcacatata
ctatgtaattcttcaaatatatgaatatttatttgtaggtagagctatat
attatatattttagttttatattggtaagaaatatttttcagtgacattt
ttaccccaataattttactctagtttaattctgtttatttctaaaaattt
tggggagtgcccagtgttatcaaccaaatattgaacaattactgattcat
atatgcaaaaatctgggggatttgttattttgtatgaactttacatctac
taatatagttcccttatggagacagaaagatgtctcatttgccatgaatt
cctgccaggaagggaaatagtgactgctgagctaaaagtatagatcattg
ggttaatcagtgtaccattccagtccttgaaatgggagagaaaggctgtg
ttataacattttcaaaagtcaaaattacacacacacacacacacacacac
acacctatggatacacaatacacacacacacacatacacatacacacatg
tggcatctcacttttaaaatcattttcctttgcatcttttgttctttgat
cttcttatgaacagagacacatgaagtagcaatgaggccaagggtgctag
ttgtcttggcattcattaactattgcaattagcactatttagattgatat
ttttccaagatgaaagcatgatttggacaagaaaaaccaaaaaaaaaaaa
aaagatgacatttgtaaaagtggaatgacattgaccaggaagaaacaaaa
aagaaacagagctcacctcagaacacttggatgttgaaatattgattaca
tgataagatcacttcaatgtaactgtacgtctcttaagaagtatttaaat
ggtttggtggtattaaagtaaaattgaaaaagaacaccaaggccagcctg
cctttaatagccttgctggcttgaaaccctgataacataatgtcttgtaa
atagtttatgggtgactgcagtaaattgcagtgaatgtttcccaattttt
tgctctcctatcaagatctgttccagaaaacatttgttctgaagatatta
atgaaagca
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr16_43122608_43123842
seq2: B6Ng01-182D19.b_42_1240 (reverse)

seq1  CTTTAAATTGGAATTTGAATTTGCAAAATGCTAAAGGTTTATGAGATCTA  50
      |||| | |||||| |||||  ||| ||||||| |||| |||  |||||| 
seq2  CTTT-ACTTGGAA-TTGAA--TGCCAAATGCT-AAGGATTA--AGATCT-  42

seq1  AATCATGAGGAGCTTAAATTACATTCCTGTGATAAAATATTAATAAATCA  100
       |||   |||||||| |||||||| | ||  |||||||||     ||| |
seq2  -ATC--CAGGAGCTT-AATTACATCCTTGGAATAAAATAT-----AAT-A  82

seq1  ATTAAAACATAAGCCGAGTATAATATTACTTTTTTTGTGGGAACCTTGAA  150
      || | |||||||||||||||||  ||||||||||||||||||  | ||| 
seq2  ATCATAACATAAGCCGAGTATA--ATTACTTTTTTTGTGGGA--CCTGA-  127

seq1  CACAATAATTCATTAGGGTGTAGTGCAGTAACAATTATTGTATCTTTTTT  200
       ||||||  |||||||||||||||||||| ||||||| ||||||||||| 
seq2  -ACAATA--TCATTAGGGTGTAGTGCAGT-ACAATTA-TGTATCTTTTT-  171

seq1  TAATTTTCTTTTTATTAGTTTTTTTTGATAAATACATCATCAGATAACAT  250
        |||||| ||||| ||| |||||||||| ||||||||||||||| ||||
seq2  --ATTTTC-TTTTAATAG-TTTTTTTGAT-AATACATCATCAGAT-ACAT  215

seq1  TCCACATGGTAGATTATCATCCCCCAATGCAGCATCTAGAAATCGCTGTA  300
      ||||||||||||| ||||||||||||||||||||||||| ||||||||||
seq2  TCCACATGGTAGA-TATCATCCCCCAATGCAGCATCTAG-AATCGCTGTA  263

seq1  CCCCTAAACAAGAGCTACGCTCTAAATTATCTGCTGTTAGTTATCC-TTG  349
       ||||||||||||||||||||||||||||||||||||||||||||| |||
seq2  -CCCTAAACAAGAGCTACGCTCTAAATTATCTGCTGTTAGTTATCCTTTG  312

seq1  TTAGCATCAGCTGCTTCTTTTACTGAAGGGGTATTTTCCT-CTTGGGAAC  398
      |||||||||||||||||||||||||||||||||||||||| |||||||||
seq2  TTAGCATCAGCTGCTTCTTTTACTGAAGGGGTATTTTCCTCCTTGGGAAC  362

seq1  ATCTGTTCAATGCCAGCTCTACCATTTTGTGGTTTCTTAATCTCTCCTCT  448
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATCTGTTCAATGCCAGCTCTACCATTTTGTGGTTTCTTAATCTCTCCTCT  412

seq1  AAAGATGGGCACAATCACACTAATACTATCTCAGCACTGGCATGCAGAAC  498
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAGATGGGCACAATCACACTAATACTATCTCAGCACTGGCATGCAGAAC  462

seq1  CAATCAGACATGTAGACATCCTTCACGCATGCTGAAGCACCAGCTAATGT  548
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAATCAGACATGTAGACATCCTTCACGCATGCTGAAGCACCAGCTAATGT  512

seq1  TGTTTATTATTATTATTATTGTTGTTGTTGTTGGCTAGGAATTTTGTATC  598
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTTTATTATTATTATTATTGTTGTTGTTGTTGGCTAGGAATTTTGTATC  562

seq1  TCTAGAAGGGCTCTTAAATATCATTTAGTAATCAACCCCCTCATTTTAAA  648
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTAGAAGGGCTCTTAAATATCATTTAGTAATCAACCCCCTCATTTTAAA  612

seq1  TATGAAAAATCAGAAATCCAGAGAGGTGAAGTCATTTTGGTAAGCCACAC  698
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATGAAAAATCAGAAATCCAGAGAGGTGAAGTCATTTTGGTAAGCCACAC  662

seq1  AGCTACACAAGGAAATTGTAGAAATTAAAATCAAGAGTCGCCAGGCAGTG  748
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGCTACACAAGGAAATTGTAGAAATTAAAATCAAGAGTCGCCAGGCAGTG  712

seq1  GTGGCACACGCCTTTAAGCACTTGGGAGGTAGAGGCAGGCAGATTTCTGA  798
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTGGCACACGCCTTTAAGCACTTGGGAGGTAGAGGCAGGCAGATTTCTGA  762

seq1  GTTCGAGGTCTGCCTGGTCTACAGAGTGGACAGCCAGGGCTACATGGAGA  848
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTCGAGGTCTGCCTGGTCTACAGAGTGGACAGCCAGGGCTACATGGAGA  812

seq1  AACCCTGTCTCAAAAATAAAATAAAATAAAATAAAATAAAATAAAATAAA  898
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACCCTGTCTCAAAAATAAAATAAAATAAAATAAAATAAAATAAAATAAA  862

seq1  ATAAAATAAAATAAAATAAAATCAAGAGTCAAAAACTCGTAACTCAGGGC  948
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATAAAATAAAATAAAATAAAATCAAGAGTCAAAAACTCGTAACTCAGGGC  912

seq1  ATTTCCTAGATTGTATTCCAGTGCTCCACACCTCTTTAAAAATACTAGAA  998
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTTCCTAGATTGTATTCCAGTGCTCCACACCTCTTTAAAAATACTAGAA  962

seq1  TGTTTACAGCAAGCTTGATGTGCCATTCTATCCACAACTGTTTCTGTCTG  1048
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTTTACAGCAAGCTTGATGTGCCATTCTATCCACAACTGTTTCTGTCTG  1012

seq1  TAACCTAGTGGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGT  1098
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAACCTAGTGGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGT  1062

seq1  GTGTGTGTGTTTGGATTTGATTTTATCTTATTTTAATCATTAGTCATTTC  1148
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTGTGTGTGTTTGGATTTGATTTTATCTTATTTTAATCATTAGTCATTTC  1112

seq1  AGGCATAATTCTCTGAAAGGCCTGGTGGCACAAGCACGTCTTCCCACAGC  1198
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGCATAATTCTCTGAAAGGCCTGGTGGCACAAGCACGTCTTCCCACAGC  1162

seq1  TGTCAGGAAGGGACTCATTTACCTAAGGAGAGAATTC  1235
      |||||||||||||||||||||||||||||||||||||
seq2  TGTCAGGAAGGGACTCATTTACCTAAGGAGAGAATTC  1199

seq1: chr16_42998198_42999298
seq2: B6Ng01-182D19.g_59_1167

seq1  GAATTCACATATGTGCCATCTGAGTATTGATCCACATGCATGCACATATA  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCACATATGTGCCATCTGAGTATTGATCCACATGCATGCACATATA  50

seq1  CTATGTAATTCTTCAAATATATGAATATTTATTTGTAGGTAGAGCTATAT  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTATGTAATTCTTCAAATATATGAATATTTATTTGTAGGTAGAGCTATAT  100

seq1  ATTATATATTTTAGTTTTATATTGGTAAGAAATATTTTTCAGTGACATTT  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTATATATTTTAGTTTTATATTGGTAAGAAATATTTTTCAGTGACATTT  150

seq1  TTACCCCAATAATTTTACTCTAGTTTAATTCTGTTTATTTCTAAAAATTT  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTACCCCAATAATTTTACTCTAGTTTAATTCTGTTTATTTCTAAAAATTT  200

seq1  TGGGGAGTGCCCAGTGTTATCAACCAAATATTGAACAATTACTGATTCAT  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGGGAGTGCCCAGTGTTATCAACCAAATATTGAACAATTACTGATTCAT  250

seq1  ATATGCAAAAATCTGGGGGATTTGTTATTTTGTATGAACTTTACATCTAC  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATATGCAAAAATCTGGGGGATTTGTTATTTTGTATGAACTTTACATCTAC  300

seq1  TAATATAGTTCCCTTATGGAGACAGAAAGATGTCTCATTTGCCATGAATT  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAATATAGTTCCCTTATGGAGACAGAAAGATGTCTCATTTGCCATGAATT  350

seq1  CCTGCCAGGAAGGGAAATAGTGACTGCTGAGCTAAAAGTATAGATCATTG  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTGCCAGGAAGGGAAATAGTGACTGCTGAGCTAAAAGTATAGATCATTG  400

seq1  GGTTAATCAGTGTACCATTCCAGTCCTTGAAATGGGAGAGAAAGGCTGTG  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGTTAATCAGTGTACCATTCCAGTCCTTGAAATGGGAGAGAAAGGCTGTG  450

seq1  TTATAACATTTTCAAAAGTCAAAATTACACACACACACACACACACACAC  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTATAACATTTTCAAAAGTCAAAATTACACACACACACACACACACACAC  500

seq1  ACACCTATGGATACACAATACACACACACACACATACACATACACACATG  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACACCTATGGATACACAATACACACACACACACATACACATACACACATG  550

seq1  TGGCATCTCACTTTTAAAATCATTTTCCTTTGCATCTTTTGTTCTTTGAT  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGCATCTCACTTTTAAAATCATTTTCCTTTGCATCTTTTGTTCTTTGAT  600

seq1  CTTCTTATGAACAGAGACACATGAAGTAGCAATGAGGCCAAGGGTGCTAG  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTCTTATGAACAGAGACACATGAAGTAGCAATGAGGCCAAGGGTGCTAG  650

seq1  TTGTCTTGGCATTCATTAACTATTGCAATTAGCACTATTTAGATTGATAT  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGTCTTGGCATTCATTAACTATTGCAATTAGCACTATTTAGATTGATAT  700

seq1  TTTTCCAAGATGAAAGCATGATTTGGACAAGAAAAACCAAAAAAAAAAAA  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTTCCAAGATGAAAGCATGATTTGGACAAGAAAAACCAAAAAAAAAAAA  750

seq1  AAAGATGACATTTGTAAAAGTGGAATGACATTGACCAGGAAGAAACAAAA  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAGATGACATTTGTAAAAGTGGAATGACATTGACCAGGAAGAAACAAAA  800

seq1  AAGAAACAGAGCTCACCTCAGAACACTTGGATGTTTGAAATATTGATTAC  850
      ||||||||||||||||||||||||||||||||| ||||||||||||||||
seq2  AAGAAACAGAGCTCACCTCAGAACACTTGGATG-TTGAAATATTGATTAC  849

seq1  ATGATAAGATCACTTCAATGTAACTGTACGTCTCTTAAGAGTTATT--AA  898
      ||||||||||||||||||||||||||||||||||||||||  ||||  ||
seq2  ATGATAAGATCACTTCAATGTAACTGTACGTCTCTTAAGAAGTATTTAAA  899

seq1  TGGTTTGGTGGTATTAAAGTAAAA-TGAAAA--GACACC-AGGGCAGCCT  944
      |||||||||||||||||||||||| ||||||   ||||| ||| ||||||
seq2  TGGTTTGGTGGTATTAAAGTAAAATTGAAAAAGAACACCAAGGCCAGCCT  949

seq1  GCC-TTAATAG-CTTGCTGGCTTG-AACCCTGAT-ACATAATGTTCTTGT  990
      ||| ||||||| |||||||||||| ||||||||| |||||||| ||||||
seq2  GCCTTTAATAGCCTTGCTGGCTTGAAACCCTGATAACATAATG-TCTTGT  998

seq1  -AATAGTTTATGGGTGACTGCAGTAAATTGGTAGTGAATGTTTTCCAATT  1039
       |||||||||||||||||||||||||||| | ||||||||||| ||||||
seq2  AAATAGTTTATGGGTGACTGCAGTAAATT-GCAGTGAATGTTTCCCAATT  1047

seq1  TTTTGGCTCTTCCTATC-AGATCTGTTCTCAGAACA-TTTTGTTCTGAAG  1087
      |||| |||| ||||||| |||||||||| ||||| |  ||||||||||||
seq2  TTTT-GCTC-TCCTATCAAGATCTGTTC-CAGAAAACATTTGTTCTGAAG  1094

seq1  ATATT-ATGAAAGCA  1101
      ||||| |||||||||
seq2  ATATTAATGAAAGCA  1109