BAC Information

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BAC

Clone NameB6Ng01-182G17
Chromosome16 (Build37)
Map Location 81,189,222 - 81,190,334
singlet/doubletsinglet
Overlap genenone
Upstream geneLOC621365, LOC100039724
Downstream geneNcam2, LOC621470, LOC435484, Pgk1-ps1
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-182G17.bB6Ng01-182G17.g
ACCGA008312GA008313
length1,1151,097
definitionB6Ng01-182G17.b B6Ng01-182G17.g
singlet/doublet---singlet
BLAST hitno hit dataunique
sequence
gaattcctgatctttccaaaacttttatcatgaatgggtgttggatcttg
tcaaatgctttttctgcatctaacgagatgatcatgtggtttttgtcttt
gagtttgtttatataatggattacattgatggattttcgtatattaaacc
atccctgcttccctggaataaaacctacttggtcaggatggatgattgtt
ttaatgtgttcttggattcggttagcgagaattttattgaggatttttgc
atcgatattcataagagaaattggtctgaagttctctatctttgttggat
ctttctgtggtttaggtatcagagtaatagtggcttcataaaatgagttg
ggtagagtaccttctacttctattttgtgaaatagtttgtgcagaattgg
aattagatcttctttgaaggtctgatagaactctgcactaaacccatctg
gtcctgggctttttttggttgggagactattaataactgcttctatttct
ttaggtgatatgggactgtttagatggtcaacttgatcctgattcaactt
tggtacctggtatctgtccagaaatttgtccatttcgtccaggttttcca
gttttgttgagtatagccttttgtagaaggatctgatggtgttttggatt
tctttaggatctgttttcatttctgattttgtgaattaggattttgtccc
tgtgccctttagtgagtctagctaagggtttatctatcttgttgattttc
tcaaagaaccaactcctcgtttggttaattctttgaatagttcttcttgt
ttccacttggttgatttcacccctgagtttgattatttcctgccgtctac
tcctcttgggtgaatttgcttcctttttttctagagcttttagatgtgtt
gtcaagctgctagtatgtgctgtctcccgtttcttcttggaggcactcag
agctatgagtttccctcttaaaaatgctttccattggtgtcccaataggg
tttggggtacgtgtgggccttcattttcattaactcctaaaaaaggcctt
taatatctttcttttttccttccttgaaccaaggatacactgagaaaaga
gtgcgtattccagct
gaattcttatgccaatgccaggatctaatttaaaagcataaaactgagcc
aagtcaccactgactaaagctctgtggcttaaaagctcccaaaagactac
tttttttccccctaaatgtatctgataaaaagtagatgcttaataaagag
cagctctttgtaatcagcacattaagccgatagaatgaaaaaaaagttga
attcattacttttttgattcaattatgtaaaccaaggggcattattttac
cagttatttagaggagagacttttttcttctttgttttcaaattatacca
ttattttatccattgatattgtgtgtagtgcttcaatggagatgaaaatt
taaattgaaaatacctaaatttattaaattctttactgttatggctataa
tctgagaataagggacagggattaaaagatgattataaaaatgttgcatt
gagtatatagtgtgtattatattatctgtatgtaatgtctattaccttag
aagatgagatgtgttatcagtccatttaatgataaataaacatcatcatc
caattaaatgatggatttttttatgaggaacattgtttttctatgtcata
gatgagtcccagactgatgactctggccgttgataaaaccttgaattatc
attctagagttacaatctcaaggcttctcactctcctaaagatagggcat
ttgtgaccaatttactaaatattcttaaggacacaatgacattttaaagg
aaaagttggaaaaagtcaaagttctacctttcatgtgcaattggcatgcc
tgtagatactctcagaatttcactacataagcaaaaattcaagataatga
atacaattacaaatgtcaccttactggtacactgagaggcttctgatctt
gagatactgatcatataacacatgtgattatgtgtgtgttgtctgtgtat
gtacatacaaatatttctaacttcactggaaatgtaaatgaacactttaa
attcttcatgatatatttgtagtacgacacccaaactactcatatatata
attattcagaacctattattgtttttttacacaatgagagaatatca
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr16_81189222_81190334
seq2: B6Ng01-182G17.g_63_1159 (reverse)

seq1  TGATATTCTCTACAATTGTTGGTTAAAAAACAATAATAGTTTCTGAAATT  50
      |||||||||||   |||||  || ||||||||||||||| |||||||   
seq2  TGATATTCTCT--CATTGT--GTAAAAAAACAATAATAGGTTCTGAA---  43

seq1  ATTAATTATAT-TATGAGTTAGTTTTGGGTGTCCGTACTTACAAATATAA  99
        ||||||||| |||||| ||| ||||||||| ||||| ||||||||| |
seq2  --TAATTATATATATGAG-TAG-TTTGGGTGT-CGTAC-TACAAATAT-A  86

seq1  CCATGAAGAATTTAAAGTGTTCATTTACATTTTCCAGTGAAGTTAGAATT  149
       |||||||||||||||||||||||||||| |||||||||||||||||| |
seq2  TCATGAAGAATTTAAAGTGTTCATTTACA-TTTCCAGTGAAGTTAGAAAT  135

seq1  ATTTGTATGTACATACACAGACAACACACACATAATCACATGTGTTATTA  199
      ||||||||||||||||||||||||||||||||||||||||||||||| ||
seq2  ATTTGTATGTACATACACAGACAACACACACATAATCACATGTGTTA-TA  184

seq1  TGATCAGTATCTCAAGATCAGAAGCCTCTCAGTGTACCAGTAAGGTGACA  249
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGATCAGTATCTCAAGATCAGAAGCCTCTCAGTGTACCAGTAAGGTGACA  234

seq1  TTTGTAATTGTATTCATTTATCTTGAATTTTTGCTTATGTAGTGAAATTC  299
      |||||||||||||||| |||||||||||||||||||||||||||||||||
seq2  TTTGTAATTGTATTCA-TTATCTTGAATTTTTGCTTATGTAGTGAAATTC  283

seq1  TGAGAGTATCTACAGGCATGCCAATTGCACATGAAAGGTAGAACTTTGAC  349
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGAGAGTATCTACAGGCATGCCAATTGCACATGAAAGGTAGAACTTTGAC  333

seq1  TTTTTCCAACTTTTCCTTTAAAATGTCATTGTGTCCTTAAGAATATTTAG  399
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTTTCCAACTTTTCCTTTAAAATGTCATTGTGTCCTTAAGAATATTTAG  383

seq1  TAAATTGGTCACAAATGCCCTATCTTTAGGAGAGTGAGAAGCCTTGAGAT  449
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAAATTGGTCACAAATGCCCTATCTTTAGGAGAGTGAGAAGCCTTGAGAT  433

seq1  TGTAACTCTAGAATGATAATTCAAGGTTTTATCAACGGCCAGAGTCATCA  499
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTAACTCTAGAATGATAATTCAAGGTTTTATCAACGGCCAGAGTCATCA  483

seq1  GTCTGGGACTCATCTATGACATAGAAAAACAATGTTCCTCATAAAAAAAT  549
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTCTGGGACTCATCTATGACATAGAAAAACAATGTTCCTCATAAAAAAAT  533

seq1  CCATCATTTAATTGGATGATGATGTTTATTTATCATTAAATGGACTGATA  599
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCATCATTTAATTGGATGATGATGTTTATTTATCATTAAATGGACTGATA  583

seq1  ACACATCTCATCTTCTAAGGTAATAGACATTACATACAGATAATATAATA  649
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACACATCTCATCTTCTAAGGTAATAGACATTACATACAGATAATATAATA  633

seq1  CACACTATATACTCAATGCAACATTTTTATAATCATCTTTTAATCCCTGT  699
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACACTATATACTCAATGCAACATTTTTATAATCATCTTTTAATCCCTGT  683

seq1  CCCTTATTCTCAGATTATAGCCATAACAGTAAAGAATTTAATAAATTTAG  749
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCCTTATTCTCAGATTATAGCCATAACAGTAAAGAATTTAATAAATTTAG  733

seq1  GTATTTTCAATTTAAATTTTCATCTCCATTGAAGCACTACACACAATATC  799
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTATTTTCAATTTAAATTTTCATCTCCATTGAAGCACTACACACAATATC  783

seq1  AATGGATAAAATAATGGTATAATTTGAAAACAAAGAAGAAAAAAGTCTCT  849
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATGGATAAAATAATGGTATAATTTGAAAACAAAGAAGAAAAAAGTCTCT  833

seq1  CCTCTAAATAACTGGTAAAATAATGCCCCTTGGTTTACATAATTGAATCA  899
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTCTAAATAACTGGTAAAATAATGCCCCTTGGTTTACATAATTGAATCA  883

seq1  AAAAAGTAATGAATTCAACTTTTTTTTCATTCTATCGGCTTAATGTGCTG  949
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAAAGTAATGAATTCAACTTTTTTTTCATTCTATCGGCTTAATGTGCTG  933

seq1  ATTACAAAGAGCTGCTCTTTATTAAGCATCTACTTTTTATCAGATACATT  999
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTACAAAGAGCTGCTCTTTATTAAGCATCTACTTTTTATCAGATACATT  983

seq1  TAGGGGGAAAAAAAGTAGTCTTTTGGGAGCTTTTAAGCCACAGAGCTTTA  1049
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAGGGGGAAAAAAAGTAGTCTTTTGGGAGCTTTTAAGCCACAGAGCTTTA  1033

seq1  GTCAGTGGTGACTTGGCTCAGTTTTATGCTTTTAAATTAGATCCTGGCAT  1099
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTCAGTGGTGACTTGGCTCAGTTTTATGCTTTTAAATTAGATCCTGGCAT  1083

seq1  TGGCATAAGAATTC  1113
      ||||||||||||||
seq2  TGGCATAAGAATTC  1097