BAC Information

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BAC

Clone NameB6Ng01-183P12
Chromosome16 (Build37)
Map Location 81,785,939 - 81,787,004
singlet/doubletsinglet
Overlap genenone
Upstream geneLOC100039724, Ncam2
Downstream geneLOC621470, LOC435484, Pgk1-ps1, EG665260
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-183P12.bB6Ng01-183P12.g
ACCGA009463GA009464
length1,1501,068
definitionB6Ng01-183P12.b B6Ng01-183P12.g
singlet/doublet---singlet
BLAST hitno hit dataunique
sequence
gaattctttgttttgctctgaaccccgtttttaatggggttctttgaatt
tctggaatccagtttcttgagctcttccatttatattggatattagtccc
ctatcagatttaggattggtaaaaatcctttctcaacctgttggtggcct
ttttgtcttattgacggtttcttttgccttacagaagctttgcaatttta
agaggtcccatttgtcaattcttgatcttacagcacaagccattgctgtt
ctgtttaggaaaatttcccctgtgcccatattcaaggcttttccctactt
tctcctctcttaatttcagtgtctctggtcttatgtggaggtctttgatc
cacttagacttgagctttgcacaaggagataagaatggattaattcaaat
tcttctacatgataaccaccagttgtgccagtaccatttgttgaaaatgc
tgtcttttttccactggatggctttagctcccttgtcaaagatcaagtga
ccataggtgtgtgaaatcatttctgggtcttcaattcaaatccattgatc
tacctatctgtcattgaaccagtaccatgcaatttttatcacaattgctc
tgtagtacagcttattgtcaggcatgacgattccaccagaggttctttta
ttgttgagaatagtttttgctatcctaggttttttttttccagatgaatt
tgcaaattgccctttctatctcagtgaagctacataacatagtgcactcc
tgtcaacaagcacttcttggtgtcagcaatagtgtctgggttttagtgtc
tgctgaatgtgggatggatccctagatgtggtggtatctgaatagcattt
ccttcagtctctgctccatactttgtccttgcatttcctcttgacaggat
gaattctggatattttccttttgaggtagaagtacacagccaaacaaaag
aattgagtgtggggaccccaatgggaggagttatggcatggactgaggag
ctgaaggggttgccatctccattaggagatgcacatatcaaccattcaga
cactccccgctcccaagtctctcatggaactaaagaaccaccatcgatat
acacatgggttggaactcatggccttcagcttggatatcgtagaaacctg


gaattcagtgtgttaaatagatcgagtcttgagatatttacttatagatg
tataaatacattttagaaaacacccaaataatttgatcaaacataaaatg
aagcaactcaaaagagttgcataagttcattagatgcacatacatgcaag
ttattcccagtgactttaaaaaatggtcctatcacaaaatatttatagtg
agaaaatactgtattaatatctatatatttatttttagatagttgtgcat
gttataagccataaatattgagaatttgagacatttaaattatagctaaa
actaaatcttagaagaataacctatgtagaaataaaaatgatctaagcac
aaagtaaattatggaaactttaaatcttatattctacatcttaaactgga
actatgtctgggaagatatttcatgataaattagtcaatcactaaaagaa
tagttctgtcattcttcagtaatgacctggaaaaagactatttctgtctg
aaacaccttgatctaatgcaagggtactgtctcagtttttatctaaaaaa
acaaaaatacaaaagcttagtctgcaccatcattatatatcaggtaacaa
agtagttctcaatgacagctaggattgtttcacagtgtaacagaagtcta
ataaaaggcccatctcttggtacacatatggcatctcaaagcattaaata
tgtgaaatatatatggctttaagttaattatattttatacatttatgaaa
taaaagcaagctgatattgcaaaggaatcaacaatttatttcagctgtcc
tttagaaattttaccacagtttcagcttgaatgaatacatactacatttt
aaaaagccaggaattttaggcaacatttttaatgtgaaggaaacaaaata
aaaaatggaatatatgcatatatgcatacatatatacacatgtcacaaaa
taacattacatatacacatatatagatatgcacatgtgcacataatacac
atatatgtatataatatctggatatatttaatagtaataggaaagaaaag
ctggagtggaggaaggct
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr16_81785939_81787004
seq2: B6Ng01-183P12.g_68_1135

seq1  GAATTCAGTGTGTTAAATAGATCGAGTCTTGAGATATTTACTTATAGATG  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCAGTGTGTTAAATAGATCGAGTCTTGAGATATTTACTTATAGATG  50

seq1  TATAAATACATTTTAGAAAACACCCAAATAATTTGATCAAACATAAAATG  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATAAATACATTTTAGAAAACACCCAAATAATTTGATCAAACATAAAATG  100

seq1  AAGCAACTCAAAAGAGTTGCATAAGTTCATTAGATGCACATACATGCAAG  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGCAACTCAAAAGAGTTGCATAAGTTCATTAGATGCACATACATGCAAG  150

seq1  TTATTCCCAGTGACTTTAAAAAATGGTCCTATCACAAAATATTTATAGTG  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTATTCCCAGTGACTTTAAAAAATGGTCCTATCACAAAATATTTATAGTG  200

seq1  AGAAAATACTGTATTAATATCTATATATTTATTTTTAGATAGTTGTGCAT  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAAAATACTGTATTAATATCTATATATTTATTTTTAGATAGTTGTGCAT  250

seq1  GTTATAAGCCATAAATATTGAGAATTTGAGACATTTAAATTATAGCTAAA  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTATAAGCCATAAATATTGAGAATTTGAGACATTTAAATTATAGCTAAA  300

seq1  ACTAAATCTTAGAAGAATAACCTATGTAGAAATAAAAATGATCTAAGCAC  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTAAATCTTAGAAGAATAACCTATGTAGAAATAAAAATGATCTAAGCAC  350

seq1  AAAGTAAATTATGGAAACTTTAAATCTTATATTCTACATCTTAAACTGGA  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAGTAAATTATGGAAACTTTAAATCTTATATTCTACATCTTAAACTGGA  400

seq1  ACTATGTCTGGGAAGATATTTCATGATAAATTAGTCAATCACTAAAAGAA  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTATGTCTGGGAAGATATTTCATGATAAATTAGTCAATCACTAAAAGAA  450

seq1  TAGTTCTGTCATTCTTCAGTAATGACCTGGAAAAAGACTATTTCTGTCTG  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAGTTCTGTCATTCTTCAGTAATGACCTGGAAAAAGACTATTTCTGTCTG  500

seq1  AAACACCTTGATCTAATGCAAGGGTACTGTCTCAGTTTTTATCTAAAAAA  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAACACCTTGATCTAATGCAAGGGTACTGTCTCAGTTTTTATCTAAAAAA  550

seq1  ACAAAAATACAAAAGCTTAGTCTGCACCATCATTATATATCAGGTAACAA  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACAAAAATACAAAAGCTTAGTCTGCACCATCATTATATATCAGGTAACAA  600

seq1  AGTAGTTCTCAATGACAGCTAGGATTGTTTCACAGTGTAACAGAAGTCTA  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTAGTTCTCAATGACAGCTAGGATTGTTTCACAGTGTAACAGAAGTCTA  650

seq1  ATAAAAGGCCCATCTCTTGGTACACATATGGCATCTCAAAGCATTAAATA  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATAAAAGGCCCATCTCTTGGTACACATATGGCATCTCAAAGCATTAAATA  700

seq1  TGTGAAATATATATGGCTTTAAGTTAATTATATTTTATACATTTATGAAA  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTGAAATATATATGGCTTTAAGTTAATTATATTTTATACATTTATGAAA  750

seq1  TAAAAGCAAGCTGATATTGCAAAGGAATCAACAATTTATTTCAGCTGTCC  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAAAAGCAAGCTGATATTGCAAAGGAATCAACAATTTATTTCAGCTGTCC  800

seq1  TTTAGAAATTTTACCACAGTTTCAGCTTGAATGAATACATACTACATTTT  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTAGAAATTTTACCACAGTTTCAGCTTGAATGAATACATACTACATTTT  850

seq1  AAAAAGCCAGGAATTTTAGGCAACATTTTTAATGTGAAGGAAACAAAATT  900
      ||||||||||||||||||||||||||||||||||||||||||||||||| 
seq2  AAAAAGCCAGGAATTTTAGGCAACATTTTTAATGTGAAGGAAACAAAATA  900

seq1  AAAAATGGAATATATGCATATATGCATACATATATACACATGTTCACAAA  950
      |||||||||||||||||||||||||||||||||||||||||| |||||||
seq2  AAAAATGGAATATATGCATATATGCATACATATATACACATG-TCACAAA  949

seq1  AT-ACATTACATATACACATATATAGATATGCACATGTGCACAT-ATACA  998
      || ||||||||||||||||||||||||||||||||||||||||| |||||
seq2  ATAACATTACATATACACATATATAGATATGCACATGTGCACATAATACA  999

seq1  CATATATGTATATAATATTTGGGATATATTT-ATAGTAATAAGGAAGAGA  1047
      |||||||||||||||||| | |||||||||| ||||||||| | |||| |
seq2  CATATATGTATATAATATCT-GGATATATTTAATAGTAATAGGAAAGAAA  1048

seq1  AGTTGGAGT-GAGGAGGGCT  1066
      || |||||| ||||| ||||
seq2  AGCTGGAGTGGAGGAAGGCT  1068


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