BAC Information

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BAC

Clone NameB6Ng01-184G17
Chromosome13 (Build37)16 (Build37)
Map Location 70,860,296 - 70,861,51417,146,738 - 17,146,892
singlet/doubletsingletsinglet
Overlap genenone
Upstream gene3110006E14Rik, 4930547H16Rik, Med10, EG620143, LOC100042291, 4930520P13Rik, EG633042, BC018507, EG620473
Downstream geneAdamts16, 8030423J24Rik, LOC627230, LOC100042360
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-184G17.bB6Ng01-184G17.g
ACCGA009803GA009804
length1,236604
definitionB6Ng01-184G17.b B6Ng01-184G17.g
singlet/doubletsingletsinglet
BLAST hituniqueunique
Map location.(70,860,296 - 70,861,514)(17,146,738 - 17,146,892)
sequence
gaattccagtcacaagaactccatgggtgttctaatgactcttattacct
ctgtcagattttagaactgtcaattcatccccagctcagagccacaaagt
tcacccccatttctcccactgtagaagattcttctctgtaaaggattatc
ttcatttagacatgatgagtctgaagggtagtgaaacccaacttactgac
agcagatcctcaactgttctatgaactcacatatatcagagctggtaact
ttggtcagtggtgtgatcgggagcagcagtgctgggaagcaggtaggtca
catgggaagcctcagagagattgcgaccactaggacatcaaaagtcagca
tacaaatggattctattgtttctcttcgatattaataatttttggtatca
acttgaatgtactaagggatgcccagattggtgatatagcaatatttcta
gatgctatgatgctgtctgtggaaagattggctttgggatttttaaatgt
agtaaacaccaccatcaatagtgtgagcagcaccatccaatatattgaaa
gcccataaccctcccactccccccaaaagcagatgaaatccaaactgctt
ctcttacttcagccaggacacacattttcccttatctctggttcttaagt
ggtcagatgctaagaccaatccagtagttctaagcccttggagcatccac
tttgagttgaataatgctacaagctgccctgacccttcagcttgcagatt
atgggacagtgagcctcgaaaatctttacaaccaattctcctaataaatt
ctcttgtttatctagtaacaatctgtcagcctctatctttgtctatatat
gtacttgttatctctccatctaaatagctcggtatcatctatttatttat
taacttatctaccacctattcacctattatctatcatctatgtctacata
tcagtatctagctagcctagctattatctattcaagtatctcttatctat
atctacctatcaatatctatctcactctctctctctgttatctattctat
ctatccatcttattctatttccggctaatgcaatgttctaacatctaccc
tattagaaccctcttttctacacctcctccattttgcctatgatcctgca
gtgtattcttccccacacattaaattccaagcatccaatccatgtttcag
tttctcctggacagcgcttccactcctgagactact

gaattcctgatttgattcaaataattttaggaagaaagtttaaggagatg
gttttcgttgtttggccagaaagatgtaataccgttaaaatcaagaacag
aacgtgtctcctcctcataaaacagtaagtaaatgcttcataataagaag
tataatgaactttctccaattgcactgagaagagatagacttgggacaga
cgtgtgatcaaggaaaaatattcattctaggtcaggtccaaggatgaagc
cacaggtgtgcactatgatgaagcaaggccaagtgaaactgttgttttga
aattataatgagcctatagaatgaaacactgctttgaccttactatcagc
atccttttgtaactccccttttgtgtaacattttatttgtgagataattt
tataaagatcttttgtctaggaagctatcaaaaggctgagcgagaaaatg
tggctgctggggctctgctccatccaccaaatatgtgtgtgtgcgtgcac
gtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtacaatatgtatatatg
actgtctatatgtatgtacacacacatatatgtagataaatgaatatgta
tata
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr13_70860296_70861514
seq2: B6Ng01-184G17.b_42_1277 (reverse)

seq1  AGTAGTCTAAG--ATGGAAACGCTGTCCA-GAGAAACTGAACCAAGTGGG  47
      |||||||| ||   ||||| ||||||||| ||||||||||| ||    ||
seq2  AGTAGTCTCAGGAGTGGAAGCGCTGTCCAGGAGAAACTGAAACA---TGG  47

seq1  ATTGGATGCTTGG-ATTTA---TGTGTGGAAAGATACACTTGCA-GAT-A  91
      ||||||||||||| |||||   |||| ||||  |||||| |||| ||| |
seq2  ATTGGATGCTTGGAATTTAATGTGTGGGGAAGAATACAC-TGCAGGATCA  96

seq1  TAGGC-AAATGGA-GAGGTGTAG-AAAGAGG--TCT-ATA-GGTAGATGT  134
      ||||| ||||||| ||||||||| |||||||  ||| ||| |||||||||
seq2  TAGGCAAAATGGAGGAGGTGTAGAAAAGAGGGTTCTAATAGGGTAGATGT  146

seq1  TAG-ACA-TGCA-TAGGCGGAAATAGA--TAGATGGATAGATAG-ATAGA  178
      ||| ||| |||| ||| ||||||||||   |||||||||||||| |||||
seq2  TAGAACATTGCATTAGCCGGAAATAGAATAAGATGGATAGATAGAATAGA  196

seq1  TAAACAGAGAGAGAGAGTGAGATAGATATTGATAGGTAGATATAGATAAG  228
      | ||||||||||||||||||||||||||||||||||||||||||||||||
seq2  T-AACAGAGAGAGAGAGTGAGATAGATATTGATAGGTAGATATAGATAAG  245

seq1  AGATACTTGAATAGATAATAGCTAGGCTAGCTAGATACTGATATGTAGAC  278
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGATACTTGAATAGATAATAGCTAGGCTAGCTAGATACTGATATGTAGAC  295

seq1  ATAGATGATAGATAATAGGTGAATAGGTGGTAGATAAGTTAATAAATAAA  328
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATAGATGATAGATAATAGGTGAATAGGTGGTAGATAAGTTAATAAATAAA  345

seq1  TAGATGATACCGAGCTATTTAGATGGAGAGATAACAAGTACATATATAGA  378
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAGATGATACCGAGCTATTTAGATGGAGAGATAACAAGTACATATATAGA  395

seq1  CAAAGATAGAGGCTGACAGATTGTTACTAGATAAACAAGAGAATTTATTA  428
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAAAGATAGAGGCTGACAGATTGTTACTAGATAAACAAGAGAATTTATTA  445

seq1  GGAGAATTGGTTGTAAAGATTTTCGAGGCTCACTGTCCCATAATCTGCAA  478
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGAGAATTGGTTGTAAAGATTTTCGAGGCTCACTGTCCCATAATCTGCAA  495

seq1  GCTGAAGGGTCAGGGCAGCTTGTAGCATTATTCAACTCAAAGTGGATGCT  528
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCTGAAGGGTCAGGGCAGCTTGTAGCATTATTCAACTCAAAGTGGATGCT  545

seq1  CCAAGGGCTTAGAACTACTGGATTGGTCTTAGCATCTGACCACTTAAGAA  578
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCAAGGGCTTAGAACTACTGGATTGGTCTTAGCATCTGACCACTTAAGAA  595

seq1  CCAGAGATAAGGGAAAATGTGTGTCCTGGCTGAAGTAAGAGAAGCAGTTT  628
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCAGAGATAAGGGAAAATGTGTGTCCTGGCTGAAGTAAGAGAAGCAGTTT  645

seq1  GGATTTCATCTGCTTTTGGGGGGAGTGGGAGGGTTATGGGCTTTCAATAT  678
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGATTTCATCTGCTTTTGGGGGGAGTGGGAGGGTTATGGGCTTTCAATAT  695

seq1  ATTGGATGGTGCTGCTCACACTATTGATGGTGGTGTTTACTACATTTAAA  728
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTGGATGGTGCTGCTCACACTATTGATGGTGGTGTTTACTACATTTAAA  745

seq1  AATCCCAAAGCCAATCTTTCCACAGACAGCATCATAGCATCTAGAAATAT  778
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATCCCAAAGCCAATCTTTCCACAGACAGCATCATAGCATCTAGAAATAT  795

seq1  TGCTATATCACCAATCTGGGCATCCCTTAGTACATTCAAGTTGATACCAA  828
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGCTATATCACCAATCTGGGCATCCCTTAGTACATTCAAGTTGATACCAA  845

seq1  AAATTATTAATATCGAAGAGAAACAATAGAATCCATTTGTATGCTGACTT  878
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAATTATTAATATCGAAGAGAAACAATAGAATCCATTTGTATGCTGACTT  895

seq1  TTGATGTCCTAGTGGTCGCAATCTCTCTGAGGCTTCCCATGTGACCTACC  928
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGATGTCCTAGTGGTCGCAATCTCTCTGAGGCTTCCCATGTGACCTACC  945

seq1  TGCTTCCCAGCACTGCTGCTCCCGATCACACCACTGACCAAAGTTACCAG  978
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGCTTCCCAGCACTGCTGCTCCCGATCACACCACTGACCAAAGTTACCAG  995

seq1  CTCTGATATATGTGAGTTCATAGAACAGTTGAGGATCTGCTGTCAGTAAG  1028
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCTGATATATGTGAGTTCATAGAACAGTTGAGGATCTGCTGTCAGTAAG  1045

seq1  TTGGGTTTCACTACCCTTCAGACTCATCATGTCTAAATGAAGATAATCCT  1078
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGGGTTTCACTACCCTTCAGACTCATCATGTCTAAATGAAGATAATCCT  1095

seq1  TTACAGAGAAGAATCTTCTACAGTGGGAGAAATGGGGGTGAACTTTGTGG  1128
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTACAGAGAAGAATCTTCTACAGTGGGAGAAATGGGGGTGAACTTTGTGG  1145

seq1  CTCTGAGCTGGGGATGAATTGACAGTTCTAAAATCTGACAGAGGTAATAA  1178
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCTGAGCTGGGGATGAATTGACAGTTCTAAAATCTGACAGAGGTAATAA  1195

seq1  GAGTCATTAGAACACCCATGGAGTTCTTGTGACTGGAATTC  1219
      |||||||||||||||||||||||||||||||||||||||||
seq2  GAGTCATTAGAACACCCATGGAGTTCTTGTGACTGGAATTC  1236


seq1: chr16_17146738_17146892
seq2: B6Ng01-184G17.g_564_668 (reverse)

seq1  TATATACATAAGTATAAACACATATATGTGTGTGTGTGTATTTATGTATG  50
                                                        
seq2  --------------------------------------------------  0

seq1  TATATATATACT-ATATATACACACACACGTGTATACACGTATATACATA  99
      |||||| ||| | || |||  ||| | | |||| |  || || ||| | |
seq2  TATATACATATTCATTTATCTACATATATGTGTGTGTACATACATATAGA  50

seq1  CATATGT-ATATATACATA-AACACACACACACACACACACACACACACA  147
      ||   || |||||||||||    |||||||||||||||||||||||||||
seq2  CA---GTCATATATACATATTGTACACACACACACACACACACACACACA  97

seq1  CACACACG  155
      ||||||||
seq2  CACACACG  105


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