BAC Information

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BAC

Clone NameB6Ng01-185O04
Chromosome16 (Build37)
Map Location 42,877,771 - 43,033,921
singlet/doubletdoublet
Overlap geneBC002163
Upstream geneLsamp, Gap43
Downstream geneLOC667484, Zbtb20, LOC100043314, Drd3, Qtrtd1, 2610015P09Rik, Zdhhc23, Gramd1c
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-185O04.bB6Ng01-185O04.g
ACCGA010876GA010877
length1,167972
definitionB6Ng01-185O04.b B6Ng01-185O04.g
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(43,032,751 - 43,033,921)(42,877,771 - 42,878,743)
sequence
gaattctctgtccgtacattgtcagcagcagttatctttgcctttttaat
tacagtcattttaaggtatgaaacctagcttactacagtcttgattttaa
tttgtttttaggattattattgatgtttgacattctttcatttatttctt
ggctatttctgttcgctcccaagaaaaaagtacgcagttcctgttcccat
tgttcacgtacattaagtgccttatgctcattggatattaatccttatat
aaatctactgttttaagggttgcctctattctcattgctgttactttctc
ttttagaaactaagcaggggaaaaacccaccaactactaggttttagagg
taaatactgtactctaaatcatttacttaatcagagaagtctactttcta
ctgataagttctgggttttttttttttttgtacttcagaaaaaaaataat
aaacacacatcctatgataaaatatcctcctctttgtggattatcaatca
ctcctttgctgcagtgctctcacgtgtgttggagaataactctcttattt
caaatgctctctgcgtgagaggagctctccatgtgtaaacggaaacatga
agaaaatggaaagtcacaggaaaaagaaacacggagataaaaagtgaaga
gtgaagtaaatgtaacagaaaatagaaattattaaaaggaaatgccttac
tgattgaaaaatctgggaacagtcttccaatttaagtcattattagttac
tggtagcattctatgtgtcatgcattaaattcaatatatttattaataat
atctctaatcctaactataacagagatctcgttcttcattttcctttgag
attagtgcagagaagtaagtcacttaccctggtaacaagaagcagttgaa
ccaaagctaaaactcaatttaaactctaagtataatgctatttccagata
ggaagtacaaaaatacacaatactaaaataaacaaacgtttccacatagc
tgtcaacaagtcactctcaaatcatgtcagtctgtaatgggaagaagtcg
cctgaatctctagagtcactaagaacagtaacatatctgtaattaaatga
acatattttctataatgtaagaaacattcatctgagtacatagtcaagca
cagagggtcctttatga

gaattccattgaattccatttgcagaactttgtgtctgaggtcaaacggt
gctgaaataaacctgtgaggagaagaaattggagttttctggaagtctct
gagctgcccagagagtgaggcaatcaggcattggggctttgattcaggtc
ttagatgacagaagtacaagcatttcagctatgaagagcaggttgacagg
tatacccccaccaggctccagagcaataatgccttttcctgatgaccttc
tagtgtttattaggttagaaaaaaaagcttaaaaatgattaaattttatc
catgttctggaagctgtctttgtttgtctgcctaggtaggccagcatttt
gggattctcactataccaagatcctgagtttattgactaggtaatgaggc
aaagagtatgttttttacttgagggcaatgctgggggtgggtgtttagat
cggttagatatggtgttgactctgacacctagttaggtggcaaggctttg
ggacatatagcgtactcctgtttgcctgtatgactttgactgattgataa
aggaaaaagatagaagagcaaagccttttcaagtgagttgtttttgtgtc
atttctgcagattttcagaagacttttgagacaaactaagcttcccagat
aaaagcctagactgaataactaggccatttaaaagagcaataaaagctac
aactaaattcctgtaaatgatttacaacataaatgaattttaaattattt
cagatatggaagggaagttttattttctgaaatagtcatggcaacatcac
cagcagttctggatacttgggatggaacagtgacgcgaggggggaaattg
ttggtctctgtggagctaagtcattaggtaatggactttgtctactcctc
attgctaagaagattattatttttttaattaaacaatccagcagcttcgt
ggttacaactagattttaaaga
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr16_43032751_43033921
seq2: B6Ng01-185O04.b_41_1207 (reverse)

seq1  TCATAAAAGACCCTCTGTGCTTGACTATGGTACTCCAAGATGGATTGTTT  50
      ||||||| |||||||||||||||||||| ||||||  |||| || |||||
seq2  TCATAAAGGACCCTCTGTGCTTGACTAT-GTACTC--AGAT-GAATGTTT  46

seq1  CTTAACATTATAG-AAATATGTTCATTTTAATTCCAAGAATATGTTACTG  99
      ||| ||||||||| ||||||||||| ||||||| ||   |||||||||||
seq2  CTT-ACATTATAGAAAATATGTTCA-TTTAATTACA--GATATGTTACTG  92

seq1  -TCTTAGTTGACTCTAGAGATTCAGGCGACTTCTTCCATTAACAGACTGA  148
       |||||| |||||||||||||||||||||||||||||  | |||||||||
seq2  TTCTTAG-TGACTCTAGAGATTCAGGCGACTTCTTCCCATTACAGACTGA  141

seq1  CATGATTTGAGAGTGACTTGTTGACAGCTATGTGGGAACGTTTGTTTA-T  197
      ||||||||||||||||||||||||||||||||||| |||||||||||| |
seq2  CATGATTTGAGAGTGACTTGTTGACAGCTATGTGGAAACGTTTGTTTATT  191

seq1  TTAGTA-TGTGTA-TTTTGTACTTCCTATCTGGAAATAGCATTATACTTA  245
      |||||| |||||| ||||||||||||||||||||||||||||||||||||
seq2  TTAGTATTGTGTATTTTTGTACTTCCTATCTGGAAATAGCATTATACTTA  241

seq1  GAGTTTAAATTGAGTTTTAGCTTTGGTTCAACTGCTTCTTGTTACCAGGG  295
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGTTTAAATTGAGTTTTAGCTTTGGTTCAACTGCTTCTTGTTACCAGGG  291

seq1  TAAGTGACTTACTTCTCTGCACTAATCTCAAAGGAAAATGAAGAACGAGA  345
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAAGTGACTTACTTCTCTGCACTAATCTCAAAGGAAAATGAAGAACGAGA  341

seq1  TCTCTGTTATAGTTAGGATTAGAGATATTATTAATAAATATATTGAATTT  395
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTCTGTTATAGTTAGGATTAGAGATATTATTAATAAATATATTGAATTT  391

seq1  AATGCATGACACATAGAATGCTACCAGTAACTAATAATGACTTAAATTGG  445
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATGCATGACACATAGAATGCTACCAGTAACTAATAATGACTTAAATTGG  441

seq1  AAGACTGTTCCCAGATTTTTCAATCAGTAAGGCATTTCCTTTTAATAATT  495
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGACTGTTCCCAGATTTTTCAATCAGTAAGGCATTTCCTTTTAATAATT  491

seq1  TCTATTTTCTGTTACATTTACTTCACTCTTCACTTTTTATCTCCGTGTTT  545
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTATTTTCTGTTACATTTACTTCACTCTTCACTTTTTATCTCCGTGTTT  541

seq1  CTTTTTCCTGTGACTTTCCATTTTCTTCATGTTTCCGTTTACACATGGAG  595
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTTTTCCTGTGACTTTCCATTTTCTTCATGTTTCCGTTTACACATGGAG  591

seq1  AGCTCCTCTCACGCAGAGAGCATTTGAAATAAGAGAGTTATTCTCCAACA  645
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGCTCCTCTCACGCAGAGAGCATTTGAAATAAGAGAGTTATTCTCCAACA  641

seq1  CACGTGAGAGCACTGCAGCAAAGGAGTGATTGATAATCCACAAAGAGGAG  695
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACGTGAGAGCACTGCAGCAAAGGAGTGATTGATAATCCACAAAGAGGAG  691

seq1  GATATTTTATCATAGGATGTGTGTTTATTATTTTTTTTCTGAAGTACAAA  745
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GATATTTTATCATAGGATGTGTGTTTATTATTTTTTTTCTGAAGTACAAA  741

seq1  AAAAAAAAAAACCCAGAACTTATCAGTAGAAAGTAGACTTCTCTGATTAA  795
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAAAAAAAAACCCAGAACTTATCAGTAGAAAGTAGACTTCTCTGATTAA  791

seq1  GTAAATGATTTAGAGTACAGTATTTACCTCTAAAACCTAGTAGTTGGTGG  845
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTAAATGATTTAGAGTACAGTATTTACCTCTAAAACCTAGTAGTTGGTGG  841

seq1  GTTTTTCCCCTGCTTAGTTTCTAAAAGAGAAAGTAACAGCAATGAGAATA  895
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTTTTCCCCTGCTTAGTTTCTAAAAGAGAAAGTAACAGCAATGAGAATA  891

seq1  GAGGCAACCCTTAAAACAGTAGATTTATATAAGGATTAATATCCAATGAG  945
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGGCAACCCTTAAAACAGTAGATTTATATAAGGATTAATATCCAATGAG  941

seq1  CATAAGGCACTTAATGTACGTGAACAATGGGAACAGGAACTGCGTACTTT  995
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATAAGGCACTTAATGTACGTGAACAATGGGAACAGGAACTGCGTACTTT  991

seq1  TTTCTTGGGAGCGAACAGAAATAGCCAAGAAATAAATGAAAGAATGTCAA  1045
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTCTTGGGAGCGAACAGAAATAGCCAAGAAATAAATGAAAGAATGTCAA  1041

seq1  ACATCAATAATAATCCTAAAAACAAATTAAAATCAAGACTGTAGTAAGCT  1095
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACATCAATAATAATCCTAAAAACAAATTAAAATCAAGACTGTAGTAAGCT  1091

seq1  AGGTTTCATACCTTAAAATGACTGTAATTAAAAAGGCAAAGATAACTGCT  1145
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGTTTCATACCTTAAAATGACTGTAATTAAAAAGGCAAAGATAACTGCT  1141

seq1  GCTGACAATGTACGGACAGAGAATTC  1171
      ||||||||||||||||||||||||||
seq2  GCTGACAATGTACGGACAGAGAATTC  1167


seq1: chr16_42877771_42878743
seq2: B6Ng01-185O04.g_62_1033

seq1  GAATTCCATTGAATTCCATTTGCAGAACTTTGTGTCTGAGGTCAAACGGT  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCCATTGAATTCCATTTGCAGAACTTTGTGTCTGAGGTCAAACGGT  50

seq1  GCTGAAATAAACCTGTGAGGAGAAGAAATTGGAGTTTTCTGGAAGTCTCT  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCTGAAATAAACCTGTGAGGAGAAGAAATTGGAGTTTTCTGGAAGTCTCT  100

seq1  GAGCTGCCCAGAGAGTGAGGCAATCAGGCATTGGGGCTTTGATTCAGGTC  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGCTGCCCAGAGAGTGAGGCAATCAGGCATTGGGGCTTTGATTCAGGTC  150

seq1  TTAGATGACAGAAGTACAAGCATTTCAGCTATGAAGAGCAGGTTGACAGG  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTAGATGACAGAAGTACAAGCATTTCAGCTATGAAGAGCAGGTTGACAGG  200

seq1  TATACCCCCACCAGGCTCCAGAGCAATAATGCCTTTTCCTGATGACCTTC  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATACCCCCACCAGGCTCCAGAGCAATAATGCCTTTTCCTGATGACCTTC  250

seq1  TAGTGTTTATTAGGTTAGAAAAAAAAGCTTAAAAATGATTAAATTTTATC  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAGTGTTTATTAGGTTAGAAAAAAAAGCTTAAAAATGATTAAATTTTATC  300

seq1  CATGTTCTGGAAGCTGTCTTTGTTTGTCTGCCTAGGTAGGCCAGCATTTT  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATGTTCTGGAAGCTGTCTTTGTTTGTCTGCCTAGGTAGGCCAGCATTTT  350

seq1  GGGATTCTCACTATACCAAGATCCTGAGTTTATTGACTAGGTAATGAGGC  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGGATTCTCACTATACCAAGATCCTGAGTTTATTGACTAGGTAATGAGGC  400

seq1  AAAGAGTATGTTTTTTACTTGAGGGCAATGCTGGGGGTGGGTGTTTAGAT  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAGAGTATGTTTTTTACTTGAGGGCAATGCTGGGGGTGGGTGTTTAGAT  450

seq1  CGGTTAGATATGGTGTTGACTCTGACACCTAGTTAGGTGGCAAGGCTTTG  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CGGTTAGATATGGTGTTGACTCTGACACCTAGTTAGGTGGCAAGGCTTTG  500

seq1  GGACATATAGCGTACTCCTGTTTGCCTGTATGACTTTGACTGATTGATAA  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGACATATAGCGTACTCCTGTTTGCCTGTATGACTTTGACTGATTGATAA  550

seq1  AGGAAAAAGATAGAAGAGCAAAGCCTTTTCAAGTGAGTTGTTTTTGTGTC  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGAAAAAGATAGAAGAGCAAAGCCTTTTCAAGTGAGTTGTTTTTGTGTC  600

seq1  ATTTCTGCAGATTTTCAGAAGACTTTTGAGACAAACTAAGCTTCCCAGAT  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTTCTGCAGATTTTCAGAAGACTTTTGAGACAAACTAAGCTTCCCAGAT  650

seq1  AAAAGCCTAGACTGAATAACTAGGCCATTTAAAAGAGCAATAAAAGCTAC  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAAGCCTAGACTGAATAACTAGGCCATTTAAAAGAGCAATAAAAGCTAC  700

seq1  AACTAAATTCCTGTAAATGATTTACAACATAAATGAATTTTAAATTATTT  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACTAAATTCCTGTAAATGATTTACAACATAAATGAATTTTAAATTATTT  750

seq1  CAGATATGGAAGGGAAGTTTTATTTTCTGAAATAGTCATGGCAACATCAC  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGATATGGAAGGGAAGTTTTATTTTCTGAAATAGTCATGGCAACATCAC  800

seq1  CAGCAGTTCTGGATACTTGGGATGGAACAGTGACGCGA-GGGGGAAATTG  849
      |||||||||||||||||||||||||||||||||||||| |||||||||||
seq2  CAGCAGTTCTGGATACTTGGGATGGAACAGTGACGCGAGGGGGGAAATTG  850

seq1  TTGGTCTCTGTGGAGCTTAAGTCATTAGGTAATGGACTTTGTCTACTCCT  899
      |||||||||||||||| |||||||||||||||||||||||||||||||||
seq2  TTGGTCTCTGTGGAGC-TAAGTCATTAGGTAATGGACTTTGTCTACTCCT  899

seq1  CATTGCTAAG-AGATTATTA-TTTTTTAATTAAACAATCCAGCAGCTTTC  947
      |||||||||| ||||||||| ||||||||||||||||||||||||| |||
seq2  CATTGCTAAGAAGATTATTATTTTTTTAATTAAACAATCCAGCAGC-TTC  948

seq1  GTGTTTTACAAACTAGATTTTAAAGA  973
      |||  |||| ||||||||||||||||
seq2  GTG-GTTAC-AACTAGATTTTAAAGA  972


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