BAC Information

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BAC

Clone NameB6Ng01-187G02
Chromosome16 (Build37)
Map Location 80,881,146 - 80,882,184
singlet/doubletsinglet
Overlap genenone
Upstream geneEG383172, 1700066C05Rik, LOC621365
Downstream geneLOC100039724, Ncam2, LOC621470, LOC435484
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-187G02.bB6Ng01-187G02.g
ACCGA011975GA011976
length1,188971
definitionB6Ng01-187G02.b B6Ng01-187G02.g
singlet/doubletsinglet---
BLAST hituniqueno hit data
sequence
gaattctcacccgaggaataccgaatggcagagaagcacctgaaaaaatg
ttcaacatccttaattatcagggaaatgcaaatcaaaacaaccctgagat
tccatctcacaccagtcagaatggctaagatcaaaaattcaggtgacagc
agatgctggcgaggatgtggagaaagaggaacactcctccactgctggtg
gaattgcaagcttgtacaaccactctggaaatcagtctggcggttcctta
gaaaattggacaaagtactaccagaggatccagcaatacctcttctgggc
atatatccagaagatgtcccaaccggtatgaaggacacatgctccactat
gttcatagcagccttatttgtaatagccagaagctggaaagaacccagat
gcccctcaacagaggaatggatacagaaaatgtggtacatttacacaatg
gagtactactcagctattaaaaagaatgaatttatgaaattcctaggcaa
atggatggacctggagggcatcatactgagcgaggtaacccaatcacaaa
ggaactcacacaatatgtactcactgataagtggatactagcccaaaact
tagtatacccaagatataagatacaatttgccaaatgcatgaaactctag
aagaataaagaccatttagcccttctaacaatttatgctatgattttatt
ttctacccaaaaattcaacatcaatttaaaataaaaaaactttctattaa
agtaaagtgctatctttaaataatttctactttataattaaaaaacaaaa
agtaacactgcccccccaagaaaaaccacaaaaacaaaaacaaaaagcct
aaaaatgaccattcttaaacattcttttacattactttatgtaaagttta
ttgaagcttttgtggaatgaaaacaacgaaaaaaatggattgtaaaatgt
cgacctatgatacagcataaccaataattattctcttccaatatctcctg
caggatttatatacactgatattaatattttttcatcactccacctttgt
agattggggagctgatctcagcctcttataacatcactctacactggaga
gtcaagttacttcattgagactgaatgttaagatgctgtggagttagtta
acttaaataacaggctagaaatgttaaattggtataat
gaattcactcctagtcactcccattctcggggtgtaatagtggggtgatg
ggcaagcaacgaatcgggagctgtcacgccatatcaggtgctgaaacgtc
acgctgcgggttataaaagcagcgccattttcccggttcgggatcttcct
gagaagcaagcaataaagcttttgccgcggaagattctggtttgttgcgt
ctttcttgccggtcgagagggacgcaatatctatctatctatctatctat
ctatctatctatctatctatctatctatctatctaccaatctatctacac
acacatacccttcctagttcatttagtgttccttttaagtacatgtatgg
ctgactacttcagagtagataaatgatcttgaggacgcctgcccctgaag
cagactgattatctcactttctccagcaccctccagtttcctgttaagtc
ttcatctatggattaggccttgaaagttttattcctatctatgtgggtat
gttaattggtacaattatcatacaggtcattttaggcaattgaaatgtag
aggcactgtgaccatagcagtgcttacaaaggtcaacatctattttggac
tggcttacagtttcagagtttcagttcattatcattataacaggaagcac
aacagcctataggcagacctaattgtcaagaacagactttctctaggtag
ctagaaggaggattcatttattgttttgcaaatgaactgggatagtttga
ataaaatgcctccttgtggttcatatattcaaatatgtgggttctagtac
tagagctattttgggaaaggattctgaggtattgggcttggaggaagtat
atttcttgaggtggggactttcaactttcacagactaacccattttcagg
tcttcttctctgatgcttctttgctttgttgggtcaagattgtgaagttc
tcaactcttccttctgccagg
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr16_80881146_80882184
seq2: B6Ng01-187G02.b_214_1235

seq1  GTGGAGAAAGAGGAACACTCCTCCACTGCTGGTGGAATTGCAAGCTTGTA  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTGGAGAAAGAGGAACACTCCTCCACTGCTGGTGGAATTGCAAGCTTGTA  50

seq1  CAACCACTCTGGAAATCAGTCTGGCGGTTCCTTAGAAAATTGGACAAAGT  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAACCACTCTGGAAATCAGTCTGGCGGTTCCTTAGAAAATTGGACAAAGT  100

seq1  ACTACCAGAGGATCCAGCAATACCTCTTCTGGGCATATATCCAGAAGATG  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTACCAGAGGATCCAGCAATACCTCTTCTGGGCATATATCCAGAAGATG  150

seq1  TCCCAACCGGTATGAAGGACACATGCTCCACTATGTTCATAGCAGCCTTA  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCCAACCGGTATGAAGGACACATGCTCCACTATGTTCATAGCAGCCTTA  200

seq1  TTTGTAATAGCCAGAAGCTGGAAAGAACCCAGATGCCCCTCAACAGAGGA  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTGTAATAGCCAGAAGCTGGAAAGAACCCAGATGCCCCTCAACAGAGGA  250

seq1  ATGGATACAGAAAATGTGGTACATTTACACAATGGAGTACTACTCAGCTA  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGGATACAGAAAATGTGGTACATTTACACAATGGAGTACTACTCAGCTA  300

seq1  TTAAAAAGAATGAATTTATGAAATTCCTAGGCAAATGGATGGACCTGGAG  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTAAAAAGAATGAATTTATGAAATTCCTAGGCAAATGGATGGACCTGGAG  350

seq1  GGCATCATACTGAGCGAGGTAACCCAATCACAAAGGAACTCACACAATAT  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGCATCATACTGAGCGAGGTAACCCAATCACAAAGGAACTCACACAATAT  400

seq1  GTACTCACTGATAAGTGGATACTAGCCCAAAACTTAGTATACCCAAGATA  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTACTCACTGATAAGTGGATACTAGCCCAAAACTTAGTATACCCAAGATA  450

seq1  TAAGATACAATTTGCCAAATGCATGAAACTCTAGAAGAATAAAGACCATT  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAAGATACAATTTGCCAAATGCATGAAACTCTAGAAGAATAAAGACCATT  500

seq1  TAGCCCTTCTAACAATTTATGCTATGATTTTATTTTCTACCCAAAAATTC  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAGCCCTTCTAACAATTTATGCTATGATTTTATTTTCTACCCAAAAATTC  550

seq1  AACATCAATTTAAAATAAAAAAACTTTCTATTAAAGTAAAGTGCTATCTT  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACATCAATTTAAAATAAAAAAACTTTCTATTAAAGTAAAGTGCTATCTT  600

seq1  TAAATAATTTCTACTTTATAATTAAAAAACAAAAAGTAACACTGCCCCCC  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAAATAATTTCTACTTTATAATTAAAAAACAAAAAGTAACACTGCCCCCC  650

seq1  CAAGAAAAACCACAAAAACAAAAACAAAAAGCCTAAAAATGACCATTCTT  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAAGAAAAACCACAAAAACAAAAACAAAAAGCCTAAAAATGACCATTCTT  700

seq1  AAACATTCTTTTACATTACTTTATGTAAAGTTTATTGAAGCTTTTGTGGA  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAACATTCTTTTACATTACTTTATGTAAAGTTTATTGAAGCTTTTGTGGA  750

seq1  ATGAAAACAACGAAAAAAATGGATTGTAAAATGTCGACCTATGATACAGC  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGAAAACAACGAAAAAAATGGATTGTAAAATGTCGACCTATGATACAGC  800

seq1  AATAAACAATAATTATTCTCTTCCAATATCTCCTGCAGGATTTATATACA  850
       |||| ||||||||||||||||||||||||||||||||||||||||||||
seq2  -ATAACCAATAATTATTCTCTTCCAATATCTCCTGCAGGATTTATATACA  849

seq1  CTGATATTAATATTTTTTCATTCACT-CACCTTTGTAGAATTGGGAGCTT  899
      |||||||||||||||||||| ||||| |||||||||||| | ||||||| 
seq2  CTGATATTAATATTTTTTCA-TCACTCCACCTTTGTAGATTGGGGAGCT-  897

seq1  GAATCTTCAGCCTC-TATAACATCACTCCTTACAACCTGAGAAGTCAAGT  948
        ||| |||||||| |||||||||||||  ||||  |||   ||||||||
seq2  -GATC-TCAGCCTCTTATAACATCACTC--TACA--CTGGAGAGTCAAGT  941

seq1  TACTTTTCATTTTGAGACTGAGTGTTAAGATGCTGTTTGAGTTAGTTTTA  998
      |||  ||||  |||||||||| ||||||||||||| | |||||||||   
seq2  TAC--TTCA--TTGAGACTGAATGTTAAGATGCTG-TGGAGTTAGTT---  983

seq1  AACTTAAAATACAGCCTAAGAAAATGTTAAATTGTTATATT  1039
      ||||||||  |||| |||   ||||||||||||| |||| |
seq2  AACTTAAATAACAGGCTA--GAAATGTTAAATTGGTATAAT  1022