BAC Information

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BAC

Clone NameB6Ng01-191D02
Chromosome16 (Build37)
Map Location 87,367,136 - 87,476,372
singlet/doubletdoublet
Overlap geneN6amt1, Zfp294, ORF5, LOC100040088, Usp16
Upstream genenone
Downstream geneCct8, B130034C11Rik, LOC435486, ORF63, Bach1, LOC100039901, Grik1, EG622373
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-191D02.bB6Ng01-191D02.g
ACCGA014752GA014753
length1,1101,024
definitionB6Ng01-191D02.b B6Ng01-191D02.g
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(87,475,258 - 87,476,372)(87,367,136 - 87,368,149)
sequence
gaattcctctgtagttttgtctttttctgcatgtgaatgatggttttagg
gaaagtaaagtgagtctggaataagtcacttgaataatgacttattccat
actcagtcacttgttcagaagttgggtactcactggtgtcacccttgttg
gcctgcaacttcctatatagaccaacccaagtttaaattcagaggtttgc
taagttgtacctccccagagttgagagtacagtcacagaaaaccacaccc
agcagcttgtatcttacagcaacttaaaaggaacccaattaatatggcat
aaactgagataatcatttctgtttaatctttatgcactaaagactacaag
ggtcagcttgtcgtcagctttaaatacagaaaacagttattttaatagga
aaaaaatactcccctatatgtaatcctatcaagataatacctacaaagaa
tcctagacacagcttttaagtaaagaacagagccctttttcttttcaaat
cctaaacatgattccatctctagtaaacactggaaaacttctcaatgggc
tggctggaaatacacagatccttaaaagatgttcctcataaaatcctaca
aagacaaaattaacacaaaaggaaataaatcttgtttgctaaagtaatac
tcacctgatcatctaaaactggaagagacaaatcaaggaacgattcatgc
actaaggagaccttaaccaaccaaaggcaatataaaaggaaaaggaaaaa
aaaatgttaaatcttactattagattagtcccatccagcagagaaagaca
ttcacattaagcattacctatcagggctcctctctcaccacccaaggatg
aagggtggaaaggtggcatttagtaagcaaaggattaagagactttgaag
gggcggttaagaacattcactgctcttccagagctcctgagttcaattcc
cagcacccacatgtgctcacagccatctgtaatggatctgcccacttctg
gtgtgttctaagaaagttacagtgtactccccatacttaaaattaattaa
tcttgcaaaaaaagaatattttgaaataaaacattatgaaactttgagac
catgagttgg

gaattcatttatactctggacactgttaggattcagctcgtccaaatttt
cattgacctttcccataaagaatatatggtagagactgacaccaaccagc
taaaacttgatcacctgttataataacaaggttacataatgattctgtgt
agtcggaagtgggctagcactacaaactaggcccttgagggctggagaga
tggctcattgactgctcttccagaggtcccgagttcaattcccagcaacc
acatagtggctcacaacaatctgtaattgtatctgatgccctctttttgt
gtatctgaagatagcaacagtgtactcatatagataaataaatcttaaaa
aaaaaaaaccaaaaaactaggcccttacgtctgtcagaatcctcggacct
tcataaagttgtgtcccagatctcccaggtccaagcttgaggtaacaaac
atttgcctggcttacactgtttaatcagaggaattttttgtgtttatctt
cctactaaattgctcagtgatcatggatatcaccaaatgatttaattgaa
ttttacttttatttttcattttagaggaaatctttaaaacaatgaagaca
agaggtctgcaagggaccacagcactttgcaggcaagcaggccaagaagc
cctgtcagtcctcaggttcagcaagtcctagtgtcctgaaagccacagaa
gtaaacaagagctgccggcagctgaacaatcgctcagtaggtttcagact
gatgccattgcctggccaagaaattttattagaaatctgtcattttaaaa
aaaaaaaaaaaagtggagccaggtggtggtggcacacacctcttaattcc
agcactctggagacagagcggagaatccctgaattcaaggccagccgaaa
tgcagagtgagtttccaggacagtcaggctgcacagagaaaccctgtctc
aaaacttaaaatcatccaacccaaagtgaaaaggaaaaggcaagaaactc
gtgagggcctgatgcaatgaatgg
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr16_87475258_87476372
seq2: B6Ng01-191D02.b_51_1160 (reverse)

seq1  CCAACTCATGGTCTTCAAAGTTCTATAATTTTTTTATTTC-AAATATTCT  49
      ||||||||||||| ||||||||  |||| | ||||||||| |||||||| 
seq2  CCAACTCATGGTC-TCAAAGTTTCATAA-TGTTTTATTTCAAAATATTC-  47

seq1  TTTTTTTTCAAAGATTAATTTATTTTATGTAT-GTGAGTACACTGTAACT  98
       |||||||  |||||||||| |||||| |||| | |||||||||||||||
seq2  -TTTTTTTGCAAGATTAATTAATTTTAAGTATGGGGAGTACACTGTAACT  96

seq1  TTCTTTAGACACACCAGAAGTGGGCAGATCCCATTACAGATGGCTGTGAG  148
      |||||   ||||||||||||||||||||| ||||||||||||||||||||
seq2  TTCTTAGAACACACCAGAAGTGGGCAGAT-CCATTACAGATGGCTGTGAG  145

seq1  CCACCATGTGGGTGCTGGGAATTGAACTCAGGAGCTCTGGAAGAGCAGTG  198
      |   ||||||||||||||||||||||||||||||||||||||||||||||
seq2  C--ACATGTGGGTGCTGGGAATTGAACTCAGGAGCTCTGGAAGAGCAGTG  193

seq1  AATGTTCTTAACCGCCCCCTTCAAAGTCTCTTAATCCTTTGCTTACTAAA  248
      |||||||||||||| |||||||||||||||||||||||||||||||||||
seq2  AATGTTCTTAACCG-CCCCTTCAAAGTCTCTTAATCCTTTGCTTACTAAA  242

seq1  TGCCACC-TTCCACCCTTCATCCTTGGGTGGTGAGAGAGGAGCCCTGATA  297
      ||||||| ||||||||||||||||||||||||||||||||||||||||||
seq2  TGCCACCTTTCCACCCTTCATCCTTGGGTGGTGAGAGAGGAGCCCTGATA  292

seq1  GGTAATGCTTAATGTGAATGTCTTTCTCTGCTGGATGGGACTAATCTAAT  347
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGTAATGCTTAATGTGAATGTCTTTCTCTGCTGGATGGGACTAATCTAAT  342

seq1  AGTAAGATTTAACATTTTTTTTTCCTTTTCCTTTTATATTGCCTTTGGTT  397
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTAAGATTTAACATTTTTTTTTCCTTTTCCTTTTATATTGCCTTTGGTT  392

seq1  GGTTAAGGTCTCCTTAGTGCATGAATCGTTCCTTGATTTGTCTCTTCCAG  447
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGTTAAGGTCTCCTTAGTGCATGAATCGTTCCTTGATTTGTCTCTTCCAG  442

seq1  TTTTAGATGATCAGGTGAGTATTACTTTAGCAAACAAGATTTATTTCCTT  497
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTTAGATGATCAGGTGAGTATTACTTTAGCAAACAAGATTTATTTCCTT  492

seq1  TTGTGTTAATTTTGTCTTTGTAGGATTTTATGAGGAACATCTTTTAAGGA  547
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGTGTTAATTTTGTCTTTGTAGGATTTTATGAGGAACATCTTTTAAGGA  542

seq1  TCTGTGTATTTCCAGCCAGCCCATTGAGAAGTTTTCCAGTGTTTACTAGA  597
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTGTGTATTTCCAGCCAGCCCATTGAGAAGTTTTCCAGTGTTTACTAGA  592

seq1  GATGGAATCATGTTTAGGATTTGAAAAGAAAAAGGGCTCTGTTCTTTACT  647
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GATGGAATCATGTTTAGGATTTGAAAAGAAAAAGGGCTCTGTTCTTTACT  642

seq1  TAAAAGCTGTGTCTAGGATTCTTTGTAGGTATTATCTTGATAGGATTACA  697
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAAAAGCTGTGTCTAGGATTCTTTGTAGGTATTATCTTGATAGGATTACA  692

seq1  TATAGGGGAGTATTTTTTTCCTATTAAAATAACTGTTTTCTGTATTTAAA  747
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATAGGGGAGTATTTTTTTCCTATTAAAATAACTGTTTTCTGTATTTAAA  742

seq1  GCTGACGACAAGCTGACCCTTGTAGTCTTTAGTGCATAAAGATTAAACAG  797
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCTGACGACAAGCTGACCCTTGTAGTCTTTAGTGCATAAAGATTAAACAG  792

seq1  AAATGATTATCTCAGTTTATGCCATATTAATTGGGTTCCTTTTAAGTTGC  847
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAATGATTATCTCAGTTTATGCCATATTAATTGGGTTCCTTTTAAGTTGC  842

seq1  TGTAAGATACAAGCTGCTGGGTGTGGTTTTCTGTGACTGTACTCTCAACT  897
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTAAGATACAAGCTGCTGGGTGTGGTTTTCTGTGACTGTACTCTCAACT  892

seq1  CTGGGGAGGTACAACTTAGCAAACCTCTGAATTTAAACTTGGGTTGGTCT  947
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGGGGAGGTACAACTTAGCAAACCTCTGAATTTAAACTTGGGTTGGTCT  942

seq1  ATATAGGAAGTTGCAGGCCAACAAGGGTGACACCAGTGAGTACCCAACTT  997
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATATAGGAAGTTGCAGGCCAACAAGGGTGACACCAGTGAGTACCCAACTT  992

seq1  CTGAACAAGTGACTGAGTATGGAATAAGTCATTATTCAAGTGACTTATTC  1047
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGAACAAGTGACTGAGTATGGAATAAGTCATTATTCAAGTGACTTATTC  1042

seq1  CAGACTCACTTTACTTTCCCTAAAACCATCATTCACATGCAGAAAAAGAC  1097
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGACTCACTTTACTTTCCCTAAAACCATCATTCACATGCAGAAAAAGAC  1092

seq1  AAAACTACAGAGGAATTC  1115
      ||||||||||||||||||
seq2  AAAACTACAGAGGAATTC  1110


seq1: chr16_87367136_87368149
seq2: B6Ng01-191D02.g_67_1090

seq1  GAATTCATTTATACTCTGGACACTGTTAGGATTCAGCTCGTCCAAATTTT  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCATTTATACTCTGGACACTGTTAGGATTCAGCTCGTCCAAATTTT  50

seq1  CATTGACCTTTCCCATAAAGAATATATGGTAGAGACTGACACCAACCAGC  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATTGACCTTTCCCATAAAGAATATATGGTAGAGACTGACACCAACCAGC  100

seq1  TAAAACTTGATCACCTGTTATAATAACAAGGTTACATAATGATTCTGTGT  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAAAACTTGATCACCTGTTATAATAACAAGGTTACATAATGATTCTGTGT  150

seq1  AGTCGGAAGTGGGCTAGCACTACAAACTAGGCCCTTGAGGGCTGGAGAGA  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTCGGAAGTGGGCTAGCACTACAAACTAGGCCCTTGAGGGCTGGAGAGA  200

seq1  TGGCTCATTGACTGCTCTTCCAGAGGTCCCGAGTTCAATTCCCAGCAACC  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGCTCATTGACTGCTCTTCCAGAGGTCCCGAGTTCAATTCCCAGCAACC  250

seq1  ACATAGTGGCTCACAACAATCTGTAATTGTATCTGATGCCCTCTTTTTGT  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACATAGTGGCTCACAACAATCTGTAATTGTATCTGATGCCCTCTTTTTGT  300

seq1  GTATCTGAAGATAGCAACAGTGTACTCATATAGATAAATAAATCTTAAAA  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTATCTGAAGATAGCAACAGTGTACTCATATAGATAAATAAATCTTAAAA  350

seq1  AAAAAAAACCAAAAAACTAGGCCCTTACGTCTGTCAGAATCCTCGGACCT  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAAAAAACCAAAAAACTAGGCCCTTACGTCTGTCAGAATCCTCGGACCT  400

seq1  TCATAAAGTTGTGTCCCAGATCTCCCAGGTCCAAGCTTGAGGTAACAAAC  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCATAAAGTTGTGTCCCAGATCTCCCAGGTCCAAGCTTGAGGTAACAAAC  450

seq1  ATTTGCCTGGCTTACACTGTTTAATCAGAGGAATTTTTTGTGTTTATCTT  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTTGCCTGGCTTACACTGTTTAATCAGAGGAATTTTTTGTGTTTATCTT  500

seq1  CCTACTAAATTGCTCAGTGATCATGGATATCACCAAATGATTTAATTGAA  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTACTAAATTGCTCAGTGATCATGGATATCACCAAATGATTTAATTGAA  550

seq1  TTTTACTTTTATTTTTCATTTTAGAGGAAATCTTTAAAACAATGAAGACA  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTTACTTTTATTTTTCATTTTAGAGGAAATCTTTAAAACAATGAAGACA  600

seq1  AGAGGTCTGCAAGGGACCACAGCACTTTGCAGGCAAGCAGGCCAAGAAGC  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAGGTCTGCAAGGGACCACAGCACTTTGCAGGCAAGCAGGCCAAGAAGC  650

seq1  CCTGTCAGTCCTCAGGTTCAGCAAGTCCTAGTGTCCTGAAAGCCACAGAA  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTGTCAGTCCTCAGGTTCAGCAAGTCCTAGTGTCCTGAAAGCCACAGAA  700

seq1  GTAAACAAGAGCTGCCGGCAGCTGAACAATCGCTCAGTAGGTTTCAGACT  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTAAACAAGAGCTGCCGGCAGCTGAACAATCGCTCAGTAGGTTTCAGACT  750

seq1  GATGCCATTGCCTGGCCAAGAAATTTTATTAGAAATCTGTCA-TTTAAAA  799
      |||||||||||||||||||||||||||||||||||||||||| |||||||
seq2  GATGCCATTGCCTGGCCAAGAAATTTTATTAGAAATCTGTCATTTTAAAA  800

seq1  AAAAAAAAAAAAGTGGAGCCAGGTGGTGGTGGCACACACCTC-TAATTCC  848
      |||||||||||||||||||||||||||||||||||||||||| |||||||
seq2  AAAAAAAAAAAAGTGGAGCCAGGTGGTGGTGGCACACACCTCTTAATTCC  850

seq1  AGCACTCTGGAGACAGAGGCGGAGAATCCCTGAATTCAAGGCCAGCCGAA  898
      ||||||||||||||||| ||||||||||||||||||||||||||||||||
seq2  AGCACTCTGGAGACAGA-GCGGAGAATCCCTGAATTCAAGGCCAGCCGAA  899

seq1  ATGCAGAGTGAG-TTCCAGGACAGTCAGGGCTGCACAGAGAAACCCTGTC  947
      |||||||||||| |||||||||||||| ||||||||||||||||||||||
seq2  ATGCAGAGTGAGTTTCCAGGACAGTCA-GGCTGCACAGAGAAACCCTGTC  948

seq1  TCAAAAACCTAAAACCAACCAAACCAAAGTGAAAA-GAAAAGGCAAGAAA  996
      || ||||| ||||| || |||| |||||||||||| ||||||||||||||
seq2  TC-AAAACTTAAAATCATCCAACCCAAAGTGAAAAGGAAAAGGCAAGAAA  997

seq1  CCCGTGAGGGC---------TGAATGG  1014
      | |||||||||         |||||||
seq2  CTCGTGAGGGCCTGATGCAATGAATGG  1024


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