BAC Information

Click to search

BAC

Clone NameB6Ng01-191K01
Chromosome16 (Build37)
Map Location 76,982,331 - 76,982,777
singlet/doubletsinglet
Overlap genenone
Upstream gene4930578N18Rik, LOC100039457, Nrip1, LOC100039316, 1700063K16Rik, LOC665120
Downstream geneUsp25, 2810055G20Rik
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-191K01.bB6Ng01-191K01.g
ACCGA015071GA015072
length4431,180
definitionB6Ng01-191K01.b B6Ng01-191K01.g
singlet/doubletsinglet---
BLAST hituniqueno hit data
sequence
aaagaatgggaatatatatacatatatatgtatttatatatatacatgta
cgtatatatacatgtatagtgtatatatatatgtatttatatatatacat
gtacgtatatatacatgtatagtgtatatatatataactggtattatttt
atatataaaaattggttatatatatattaactggtattattgtttgctgt
gccatgagtgccagaaacttcaaattgcttgaataatttgtttctgtttt
ccctagaacttcccaaagcatgcttctttagggagttggctcctcccagc
tgttatatagttcagtgtagtacttgaaatagtgataggtgtgatatggt
agggaggggaatattttgtaacattctgattaatcctcttgtatagatgg
tgtttttagttgggtttctattgctatttaaaataataccatc

gaattctcacctgaggaataccgaatggcagagaagcacctgaaaaaatg
ttcaacatccttaatcatcagggaaatgcaaatcaaaacaaccctgagat
tccacctcacaccagtgagaatggctaagatcaaaaattcaggtgacagc
agatgctggcgaggatgtggagaaagaggaacactcctccattgttggtg
ggattgcaggcttgtacaaccactctggaaatcagtctggcggttcctca
gaaaattggacatagtactaccggaggatccagcaatacctctcctgggc
atatatccagaagaagccccaactggtaagaaggacacatgctccactat
gttcatagcagccttatttataatagccagaaactggaaagaacccagat
gcccctcaacagaggaatggatacagaaaatgtggtacatctacacaatg
gagtactactcagctattaaaaagaatgaatttatgaaattcctagccaa
atagatggacctggagagcatcatcctgagtgaggtaacacaatcacaaa
ggaactcacacaatatgtactcactgataagtggatactagcccaaaacc
taggatacccacgatataagatacaatttcctaaacacatgaaactcaag
aaaaatgaagactgaagtgtggacactatgcccctccttagaagtgggaa
caaaacacccatggaaggagttacagaaacaaagtatggagctgagatga
aaggatggaccatgtagagactgccatatccagggatccaccccataatc
agcttccaaatgctgacaccattgcatacactagcaagattttactgaaa
ggacccagatgtagctgtctcttgtgagactatgccggggcctagcaaac
acagaagtggatgctcacagtcagctaatggatggatcacaggctcccaa
tggagagctagagaaagtaccaagagctaaagggatcttcaccctatagg
tggacaacattatgaactaccagtaccctgagctcttgacctctagctgc
aatatgtatcaaaagatgtctagtcgccactcactggaagagagtccaat
gaaccgccagactttgggtgccagtacaggacgtcaagggcaatgggggg
agattgcattgggctatggagaacactact
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr16_76982331_76982777
seq2: B6Ng01-191K01.b_41_488 (reverse)

seq1  ATGGTATTATTTTTTATAGCAATAGAAACCCAACT-AAGACACCATCTAA  49
      |||||||||||||  |||||||||||||||||||| || |||||||||| 
seq2  ATGGTATTATTTTAAATAGCAATAGAAACCCAACTAAAAACACCATCTAT  50

seq1  ACAAGAGGATTAATCAGAATGTTACAAAATATTCCCCTCCCTACCATATC  99
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACAAGAGGATTAATCAGAATGTTACAAAATATTCCCCTCCCTACCATATC  100

seq1  ACACCTATCACTATTTCAAGTACTACACTGAACTATATAACAGCTGGGAG  149
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACACCTATCACTATTTCAAGTACTACACTGAACTATATAACAGCTGGGAG  150

seq1  GAGCCAACTCCCTAAAGAAGCATGCTTTGGGAAGTTCTAGGGAAAACAGA  199
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGCCAACTCCCTAAAGAAGCATGCTTTGGGAAGTTCTAGGGAAAACAGA  200

seq1  AACAAATTATTCAAGCAATTTGAAGTTTCTGGCACTCATGGCACAGCAAA  249
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACAAATTATTCAAGCAATTTGAAGTTTCTGGCACTCATGGCACAGCAAA  250

seq1  CAATAATACCAGTTAATATATATATAACCAATTTTTATATATAAAATAAT  299
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAATAATACCAGTTAATATATATATAACCAATTTTTATATATAAAATAAT  300

seq1  ACCAGTTATATATATATACACTATACATGTATATATACGTACATGTATAT  349
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACCAGTTATATATATATACACTATACATGTATATATACGTACATGTATAT  350

seq1  ATATAAATACATATATATATACACTATACATGTATATATACGTACATGTA  399
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATATAAATACATATATATATACACTATACATGTATATATACGTACATGTA  400

seq1  TATATATAAATACATATATATGTATATATATTCCCATTCTTTGAATTC  447
      ||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATATATAAATACATATATATGTATATATATTCCCATTCTTTGAATTC  448


| Home | SequenceCutter | Blast | Download |