BAC Information

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BAC

Clone NameB6Ng01-193B07
Chromosome16 (Build37)
Map Location 76,105,054 - 76,106,238
singlet/doubletsinglet
Overlap genenone
Upstream geneD930038D03Rik, Rbm11, Stch, LOC546667, Samsn1
Downstream gene4930578N18Rik, LOC100039457, Nrip1, LOC100039316, 1700063K16Rik, LOC665120, Usp25
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-193B07.bB6Ng01-193B07.g
ACCGA016153GA016154
length9811,168
definitionB6Ng01-193B07.b B6Ng01-193B07.g
singlet/doublet---singlet
BLAST hitno hit dataunique
sequence
gaattctttgtttagctctgagccccatttttaatggggttatttgattt
tctggagtccaccttcttgagttctttatatatattggatattagtcccc
tatctacagattcaatgcaatccccatcaaaattccaactcaattcttca
atgaattaggaagggcaatctgcaaattcatctggaataacaaaaaacct
aggatagcaaaaactcttcccagggatagaagaacctctagtggaatcac
catgcctgacctaaagctgtactacagagcaattgtgataaaaactgcat
ggtactggtatagcgacagacaagtagaccaatggaatagaattgaagac
ccagacatgaacccacacacctatggtcacttgatctttgacaagggagc
aaaaaccatccagtggaaaaaagggagcattttcaacaaatgatgctgcc
acaactggcggttatcatgtagaagaatgcgaattgatccattcctctct
ccttgtactaaggtcaaatctaagtgggtcaaggaactccacataaaacc
agagacactgaaacttatagaggagaaagtagtgaaaagcctcgaagata
tgggtacaggggtaaaattcctgaatagaacagcaatggcttgtgctgta
agatcgagaattgacaaatgggacctcataaaattgcaaagtttctgcaa
ggcaaaagacaccctcaataagacaaaaaggccaccaacagattgggaaa
ggatctttacctgtggatttcctatatgagtcctgggtgcttaactctga
atctcatccctgcatatgaagcattttattgcttgagcctccccataccc
tgaagctaattcttattcaataataaatattcaaagatttgacaatggta
tacacacacacacacacacacacacacacacacacacacactcacacaca
cacacacagtgaaattagaacatatataagc

gaattcaattcccagcatgcatggcgggcagctcacaacctcctgggaca
actctaggggacctgatgccctcttgtgtcctcagctggcacacacacag
ccatgcacacatacacctgcagacacgcatgcgcaaaaacgaaaataata
aaagcaagaattttaaaacctcaatctattttgaggcagcattaaatttg
tcaatttagaatactagacgtgatcagggtccaaacagtaaatcctataa
gcaacactatgtagaaagacaataaaaagcaattttatacttcttataaa
cattttgtagatacacaagacctttatgtggtctctgaaaagatcacatt
ttaaaggttttataaaccttctttattgggtagggctcagaaccacaaaa
cagggctcaaacctttaagctcttctcttttactcttctctcaaaaacca
ttcaaatttattactagattctgattgggaaagggctaggccttgactct
tgaccgtctttagcaccatggcctctagaacaactgttttataattttca
ctaacaggcattgaatgacacagccatccacatctggaggagaaggtcgt
gcagaaatgttggcttgagttgatctgacaacacagcacccccagctgat
ggtacggaccagttagtgttctaggcctggagatcccacagaagactgcc
tctggcagtgagctgattggtttgtaagaaaatctggacagataggctaa
taaagaaggccctgtgagggagcagcgggaaatgaaggaagggagcaggg
gaacattggcagaatgtgtcagaggatggtaggattaaatattatcagaa
tcagtggcaggaagatggtataggaagcacttgatgctcagacttcatag
cctgaattctgtcataagaaatgttagagcctacatagaagatagatttg
ctgctatatatctgtagtccaggacccttatagtgagatgttggcagaag
acagatgaattgctcagagcttgcaagccagccatgtataacatgtttca
aagacaagaaataacagaaacagccttacaagatcaagtgaggctgagtt
caggaagtgtctctgaacctccacaaatgacactgtgttaggcattcgac
caaccatgtatccataca
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr16_76105054_76106238
seq2: B6Ng01-193B07.g_63_1230

seq1  GAATTCAATTCCCAGCATGCATGGCGGGCAGCTCACAACCTCCTGGGACA  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCAATTCCCAGCATGCATGGCGGGCAGCTCACAACCTCCTGGGACA  50

seq1  ACTCTAGGGGACCTGATGCCCTCTTGTGTCCTCAGCTGGCACACACACAG  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTCTAGGGGACCTGATGCCCTCTTGTGTCCTCAGCTGGCACACACACAG  100

seq1  CCATGCACACATACACCTGCAGACACGCATGCGCAAAAACGAAAATAATA  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCATGCACACATACACCTGCAGACACGCATGCGCAAAAACGAAAATAATA  150

seq1  AAAGCAAGAATTTTAAAACCTCAATCTATTTTGAGGCAGCATTAAATTTG  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAGCAAGAATTTTAAAACCTCAATCTATTTTGAGGCAGCATTAAATTTG  200

seq1  TCAATTTAGAATACTAGACGTGATCAGGGTCCAAACAGTAAATCCTATAA  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCAATTTAGAATACTAGACGTGATCAGGGTCCAAACAGTAAATCCTATAA  250

seq1  GCAACACTATGTAGAAAGACAATAAAAAGCAATTTTATACTTCTTATAAA  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCAACACTATGTAGAAAGACAATAAAAAGCAATTTTATACTTCTTATAAA  300

seq1  CATTTTGTAGATACACAAGACCTTTATGTGGTCTCTGAAAAGATCACATT  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATTTTGTAGATACACAAGACCTTTATGTGGTCTCTGAAAAGATCACATT  350

seq1  TTAAAGGTTTTATAAACCTTCTTTATTGGGTAGGGCTCAGAACCACAAAA  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTAAAGGTTTTATAAACCTTCTTTATTGGGTAGGGCTCAGAACCACAAAA  400

seq1  CAGGGCTCAAACCTTTAAGCTCTTCTCTTTTACTCTTCTCTCAAAAACCA  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGGGCTCAAACCTTTAAGCTCTTCTCTTTTACTCTTCTCTCAAAAACCA  450

seq1  TTCAAATTTATTACTAGATTCTGATTGGGAAAGGGCTAGGCCTTGACTCT  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCAAATTTATTACTAGATTCTGATTGGGAAAGGGCTAGGCCTTGACTCT  500

seq1  TGACCGTCTTTAGCACCATGGCCTCTAGAACAACTGTTTTATAATTTTCA  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGACCGTCTTTAGCACCATGGCCTCTAGAACAACTGTTTTATAATTTTCA  550

seq1  CTAACAGGCATTGAATGACACAGCCATCCACATCTGGAGGAGAAGGTCGT  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTAACAGGCATTGAATGACACAGCCATCCACATCTGGAGGAGAAGGTCGT  600

seq1  GCAGAAATGTTGGCTTGAGTTGATCTGACAACACAGCACCCCCAGCTGAT  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCAGAAATGTTGGCTTGAGTTGATCTGACAACACAGCACCCCCAGCTGAT  650

seq1  GGTACGGACCAGTTAGTGTTCTAGGCCTGGAGATCCCACAGAAGACTGCC  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGTACGGACCAGTTAGTGTTCTAGGCCTGGAGATCCCACAGAAGACTGCC  700

seq1  TCTGGCAGTGAGCTGATTGGTTTGTAAGAAAATCTGGACAGATAGGCTAA  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTGGCAGTGAGCTGATTGGTTTGTAAGAAAATCTGGACAGATAGGCTAA  750

seq1  TAAAGAAGGCCCTGTGAGGGAGCAGCGGGAAATGAAGGAAGGGAGCAGGG  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAAAGAAGGCCCTGTGAGGGAGCAGCGGGAAATGAAGGAAGGGAGCAGGG  800

seq1  GAACATTGGCAGAAGGTGTCAGAGGATGGTAGGATTAAATATTATCAGAA  850
      |||||||||||||| |||||||||||||||||||||||||||||||||||
seq2  GAACATTGGCAGAATGTGTCAGAGGATGGTAGGATTAAATATTATCAGAA  850

seq1  TCAGTGGCAGGAAGATGGTATAGGAAGCACTTGATGCTCAGACTTCATAG  900
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCAGTGGCAGGAAGATGGTATAGGAAGCACTTGATGCTCAGACTTCATAG  900

seq1  CCTGAATTCTGTCAT-AGAAATGTTAGAGCCTACATAGAAGATAGATTTG  949
      ||||||||||||||| ||||||||||||||||||||||||||||||||||
seq2  CCTGAATTCTGTCATAAGAAATGTTAGAGCCTACATAGAAGATAGATTTG  950

seq1  CTGCTATATATCTGTAGTCCAAGAACCCTTATAGTGAGATGGTTGGCAG-  998
      |||||||||||||||||||| || |||||||||||||||| |||||||| 
seq2  CTGCTATATATCTGTAGTCC-AGGACCCTTATAGTGAGAT-GTTGGCAGA  998

seq1  AGACAGATGAATTGCTCAGAAGCTTGCAAGCCAGCCAATGTATAACATGT  1048
      ||||||||||||||||||| |||||||||||||||| |||||||||||||
seq2  AGACAGATGAATTGCTCAG-AGCTTGCAAGCCAGCC-ATGTATAACATGT  1046

seq1  TTCAAAGACAAGAAATAACAAGGAAAACAAGCCTTTACAAGATCCAAAGT  1098
      ||||||||||||||||||||  ||||   |||| ||||||||||  ||||
seq2  TTCAAAGACAAGAAATAACA--GAAA--CAGCC-TTACAAGATC--AAGT  1089

seq1  GAGGGCTGAGTCCAGGAAGTTGTCCTCTG-ACCTCCACAAATG-CACTGT  1146
      || |||||||| ||||||| ||| ||||| ||||||||||||| ||||||
seq2  GA-GGCTGAGTTCAGGAAG-TGT-CTCTGAACCTCCACAAATGACACTGT  1136

seq1  GGTTTATAGGCATTCCAGACCAACACATGTATACATACA  1185
      |     |||||||||  ||||||| ||||||| ||||||
seq2  G----TTAGGCATTC--GACCAAC-CATGTATCCATACA  1168


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