BAC Information

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BAC

Clone NameB6Ng01-194B22
Chromosome16 (Build37)
Map Location 34,678,265 - 34,864,263
singlet/doubletdoublet
Overlap geneRopn1, Ccdc14, Mylk
Upstream gene4632417D23Rik, Heg1, Muc13, Itgb5, Umps, Kalrn, LOC100043670
Downstream genePtplb, Adcy5, Sec22a, Pdia5, Sema5b, EG546663, Dirc2, Hspbap1, Parp14
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-194B22.bB6Ng01-194B22.g
ACCGA016901GA016902
length1,1261,090
definitionB6Ng01-194B22.b B6Ng01-194B22.g
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(34,863,154 - 34,864,263)(34,678,265 - 34,679,365)
sequence
gaattcctccaagtgtggcctgttgacacccgggggtggctgaacttcag
ctattcaggctgtggaccagaccttgcaatcaacacaggtgtgtcaacaa
gattccccagggaggcacgggtgcttacattcgactaatccaacctgtaa
ctctgctgagagagactcttcgtcatatggaggggatacttatcatgttt
atgttgattatacactgagatgatcgaattctggattaaataaaattctg
agttaaataaaacattttgttaaaattaatctcacctaatgtgatggttt
gaatggttggccacagggagtggcactattaggagtgaggccttgttgga
ggaggtgtgtcacttcgtaggtgggctttgagactcctatgctcagtctc
ctcctgatgtggaagagtcctctcctggctgcccccagatcgatatgtag
aactcttgtcttctccagcactatgtctgcctggatgctgccatgcttcc
tgctatgatgataaaggactaaatctctgaatctataagccagcaccaat
taaatgtttttttctttatagaagttgccttgatcacggtgtctcttcat
agcaatgaaaccctaatgaagacacctaactttaaaaatgtggctctagc
aaacctaaggtcacatgtacagctcatgttacgtcactactggatagtga
ccctggagaacagcctgcagcccctgtactagggaggaagctccctcagg
attttgctctgccctaaacttcactaacttagaggtgcttagagcatggc
tgcttccccggtgtggggcttgggtacctgtgtgggtccttgtcccgagg
cacctgttcttacgcttcttggctctaattgccaaactagaaagttgggg
caagaaagcctttctttctcacggacttccctctgtaaggtattctaagg
aatgtagttgcccgcttcaggaaaccaacttggcacccactttcctgatg
ggccatgggcttggctgattcatgcaccactctgtgtgtcgccctctgcc
tttaaagaaaggaagtctcaggaagtcactgtctcaatcttgtgttaata
gctacactagagctaaaactcaatca
gaattccaggccaccctggtctacagagtaagttccaggacagccagggc
tacacagagaaaccctgtctcgaaaaaacaaataaacaaaaaacaaaaac
aaatacaaaaaaaaggtttctttgggataggaggagtgaaattaacttgg
tgtgatacacacatatatgaatatataatgtatattttaagttgattgtt
aaccaaactaattccagatatctgtttttccaaacagaattggtcctgat
ggcttaatcaaggtgaatgactttactcaaaaccctagggttcggctgga
ataaaagcacaattttggcaattttaaaggaagatacagaggtggctgta
cttcagaatagctgaacaccatgcaccatctaaagtcaattttcttttac
gactggtacaactaataaacaattagccaggagcatgtggaattcgtgtg
taaaacagttgggacaagacacttgcacgtggcgcaaaggtggccagcaa
agcttggctacagtacacacacgtggagtcaaaaccaggctggatttcaa
atgtggaatgcgggctggcaggtgacgaggcttggtgattgcggggtgtg
gtttacaggaggatcacggccctcgggctttcactagtccgctgctcctt
ttgtccataccgtgttcatccttatttattatcgacttttattgaggtat
aaggttgccagatataagtcaaactgaatttgactctcagataaataaca
aaaattctcacggttgcctagttgatcttattaaactgggcatcctaggt
ggaaactggggggcttccaggcattcatagctaaatcatatctgagttct
tcccttagaaagctccaggctaacacagggtatgaatgtaagttgcttta
agaaaggacgaataaggatggtcggaaattaatatttcaaaagagccatt
tcatagaattctgtgaaacatatgcatgtgatatatttcttcaattgaca
tcccctcctatgaaacagtcctctgaccactctaaggagtttcttcatcg
aagaaatagaaactgataagcttgcattatttagagtatg
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr16_34863154_34864263
seq2: B6Ng01-194B22.b_44_1169 (reverse)

seq1  TGGTTGAGTTTTAGCTC---TGTTGCTTTT---ACAAGTGTGAGCACATG  44
      || ||||||||||||||   ||| ||| ||   |||||  |||| |||  
seq2  TGATTGAGTTTTAGCTCTAGTGTAGCTATTAACACAAGATTGAG-ACAGT  49

seq1  GCCTTCCTGAGACTTCCTTTCCTTTAAGGCAGAGGGCGACACACAGAGTG  94
      | ||||||||||||||||||| || |||||||||||||||||||||||||
seq2  GACTTCCTGAGACTTCCTTTCTTTAAAGGCAGAGGGCGACACACAGAGTG  99

seq1  GTGCATGGATCAGCCCAGCCCCTGG-CCATCAGG-AAGT-GGTGCCCAG-  140
      ||||||| ||||||| ||||| ||| |||||||| |||| |||||| || 
seq2  GTGCATGAATCAGCCAAGCCCATGGCCCATCAGGAAAGTGGGTGCCAAGT  149

seq1  TGGTTTTCTTGAGC-GGCAACTAACATCCTTAGAATA-CTTACAGAGGGA  188
      |||||| ||  ||| ||||||||   ||||||||||| ||||||||||||
seq2  TGGTTTCCTGAAGCGGGCAACTACATTCCTTAGAATACCTTACAGAGGGA  199

seq1  AGTCCGTGAGAAAG-AAGGCTTTCTTG-CCCAAC-TTCTAGTTTGGCAAT  235
      |||||||||||||| |||||||||||| |||||| |||||||||||||||
seq2  AGTCCGTGAGAAAGAAAGGCTTTCTTGCCCCAACTTTCTAGTTTGGCAAT  249

seq1  TAGAGCCAAGAAGCGTAAGAACAGGTGCCTCGGGAC-AGGA-CCACACAG  283
      |||||||||||||||||||||||||||||||||||| |||| ||||||||
seq2  TAGAGCCAAGAAGCGTAAGAACAGGTGCCTCGGGACAAGGACCCACACAG  299

seq1  GTACCCAAGCCCCACACCGGGGAAGCAGCCATGCTCTAAGCACCTCTAAG  333
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTACCCAAGCCCCACACCGGGGAAGCAGCCATGCTCTAAGCACCTCTAAG  349

seq1  TTAGTGAAGTTTAGGGCAGAGCAAAATCCTGAGGGAGCTTCCTCCCTAGT  383
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTAGTGAAGTTTAGGGCAGAGCAAAATCCTGAGGGAGCTTCCTCCCTAGT  399

seq1  ACAGGGGCTGCAGGCTGTTCTCCAGGGTCACTATCCAGTAGTGACGTAAC  433
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACAGGGGCTGCAGGCTGTTCTCCAGGGTCACTATCCAGTAGTGACGTAAC  449

seq1  ATGAGCTGTACATGTGACCTTAGGTTTGCTAGAGCCACATTTTTAAAGTT  483
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGAGCTGTACATGTGACCTTAGGTTTGCTAGAGCCACATTTTTAAAGTT  499

seq1  AGGTGTCTTCATTAGGGTTTCATTGCTATGAAGAGACACCGTGATCAAGG  533
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGTGTCTTCATTAGGGTTTCATTGCTATGAAGAGACACCGTGATCAAGG  549

seq1  CAACTTCTATAAAGAAAAAAACATTTAATTGGTGCTGGCTTATAGATTCA  583
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAACTTCTATAAAGAAAAAAACATTTAATTGGTGCTGGCTTATAGATTCA  599

seq1  GAGATTTAGTCCTTTATCATCATAGCAGGAAGCATGGCAGCATCCAGGCA  633
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGATTTAGTCCTTTATCATCATAGCAGGAAGCATGGCAGCATCCAGGCA  649

seq1  GACATAGTGCTGGAGAAGACAAGAGTTCTACATATCGATCTGGGGGCAGC  683
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GACATAGTGCTGGAGAAGACAAGAGTTCTACATATCGATCTGGGGGCAGC  699

seq1  CAGGAGAGGACTCTTCCACATCAGGAGGAGACTGAGCATAGGAGTCTCAA  733
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGGAGAGGACTCTTCCACATCAGGAGGAGACTGAGCATAGGAGTCTCAA  749

seq1  AGCCCACCTACGAAGTGACACACCTCCTCCAACAAGGCCTCACTCCTAAT  783
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGCCCACCTACGAAGTGACACACCTCCTCCAACAAGGCCTCACTCCTAAT  799

seq1  AGTGCCACTCCCTGTGGCCAACCATTCAAACCATCACATTAGGTGAGATT  833
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTGCCACTCCCTGTGGCCAACCATTCAAACCATCACATTAGGTGAGATT  849

seq1  AATTTTAACAAAATGTTTTATTTAACTCAGAATTTTATTTAATCCAGAAT  883
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATTTTAACAAAATGTTTTATTTAACTCAGAATTTTATTTAATCCAGAAT  899

seq1  TCGATCATCTCAGTGTATAATCAACATAAACATGATAAGTATCCCCTCCA  933
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCGATCATCTCAGTGTATAATCAACATAAACATGATAAGTATCCCCTCCA  949

seq1  TATGACGAAGAGTCTCTCTCAGCAGAGTTACAGGTTGGATTAGTCGAATG  983
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATGACGAAGAGTCTCTCTCAGCAGAGTTACAGGTTGGATTAGTCGAATG  999

seq1  TAAGCACCCGTGCCTCCCTGGGGAATCTTGTTGACACACCTGTGTTGATT  1033
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAAGCACCCGTGCCTCCCTGGGGAATCTTGTTGACACACCTGTGTTGATT  1049

seq1  GCAAGGTCTGGTCCACAGCCTGAATAGCTGAAGTTCAGCCACCCCCGGGT  1083
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCAAGGTCTGGTCCACAGCCTGAATAGCTGAAGTTCAGCCACCCCCGGGT  1099

seq1  GTCAACAGGCCACACTTGGAGGAATTC  1110
      |||||||||||||||||||||||||||
seq2  GTCAACAGGCCACACTTGGAGGAATTC  1126

seq1: chr16_34678265_34679365
seq2: B6Ng01-194B22.g_65_1154

seq1  GAATTCCAGGCCACCCTGGTCTACAGAGTAAGTTCCAGGACAGCCAGGGC  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCCAGGCCACCCTGGTCTACAGAGTAAGTTCCAGGACAGCCAGGGC  50

seq1  TACACAGAGAAACCCTGTCTCGAAAAAACAAATAAACAAAAAACAAAAAC  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TACACAGAGAAACCCTGTCTCGAAAAAACAAATAAACAAAAAACAAAAAC  100

seq1  AAATACAAAAAAAAGGTTTCTTTGGGATAGGAGGAGTGAAATTAACTTGG  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAATACAAAAAAAAGGTTTCTTTGGGATAGGAGGAGTGAAATTAACTTGG  150

seq1  TGTGATACACACATATATGAATATATAATGTATATTTTAAGTTGATTGTT  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTGATACACACATATATGAATATATAATGTATATTTTAAGTTGATTGTT  200

seq1  AACCAAACTAATTCCAGATATCTGTTTTTCCAAACAGAATTGGTCCTGAT  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACCAAACTAATTCCAGATATCTGTTTTTCCAAACAGAATTGGTCCTGAT  250

seq1  GGCTTAATCAAGGTGAATGACTTTACTCAAAACCCTAGGGTTCGGCTGGA  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGCTTAATCAAGGTGAATGACTTTACTCAAAACCCTAGGGTTCGGCTGGA  300

seq1  ATAAAAGCACAATTTTGGCAATTTTAAAGGAAGATACAGAGGTGGCTGTA  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATAAAAGCACAATTTTGGCAATTTTAAAGGAAGATACAGAGGTGGCTGTA  350

seq1  CTTCAGAATAGCTGAACACCATGCACCATCTAAAGTCAATTTTCTTTTAC  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTCAGAATAGCTGAACACCATGCACCATCTAAAGTCAATTTTCTTTTAC  400

seq1  GACTGGTACAACTAATAAACAATTAGCCAGGAGCATGTGGAATTCGTGTG  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GACTGGTACAACTAATAAACAATTAGCCAGGAGCATGTGGAATTCGTGTG  450

seq1  TAAAACAGTTGGGACAAGACACTTGCACGTGGCGCAAAGGTGGCCAGCAA  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAAAACAGTTGGGACAAGACACTTGCACGTGGCGCAAAGGTGGCCAGCAA  500

seq1  AGCTTGGCTACAGTACACACACGTGGAGTCAAAACCAGGCTGGATTTCAA  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGCTTGGCTACAGTACACACACGTGGAGTCAAAACCAGGCTGGATTTCAA  550

seq1  ATGTGGAATGCGGGCTGGCAGGTGACGAGGCTTGGTGATTGCGGGGTGTG  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGTGGAATGCGGGCTGGCAGGTGACGAGGCTTGGTGATTGCGGGGTGTG  600

seq1  GTTTACAGGAGGATCACGGCCCTCGGGCTTTCACTAGTCCGCTGCTCCTT  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTTACAGGAGGATCACGGCCCTCGGGCTTTCACTAGTCCGCTGCTCCTT  650

seq1  TTGTCCATACCGTGTTCATCCTTATTTATTATCGACTTTTATTGAGGTAT  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGTCCATACCGTGTTCATCCTTATTTATTATCGACTTTTATTGAGGTAT  700

seq1  AAGGTTGCCAGATATAAGTCAAACTGAATTTGACTCTCAGATAAATAACA  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGGTTGCCAGATATAAGTCAAACTGAATTTGACTCTCAGATAAATAACA  750

seq1  AAAATTCTCACGGTTGCCTAGTTGATCTTATTAAACTGGGCATCCTAGGT  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAATTCTCACGGTTGCCTAGTTGATCTTATTAAACTGGGCATCCTAGGT  800

seq1  GGAAACTGGGGGGCTTCCAGGCATTCATAGCTAAATCATATCTGAGTTCT  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGAAACTGGGGGGCTTCCAGGCATTCATAGCTAAATCATATCTGAGTTCT  850

seq1  TCCCTTAGAAAGCTCCAGGCTAACACCAGGGTATGAATGTAAGTTGCTTT  900
      ||||||||||||||||||||||||| ||||||||||||||||||||||||
seq2  TCCCTTAGAAAGCTCCAGGCTAACA-CAGGGTATGAATGTAAGTTGCTTT  899

seq1  AAG-AAGGACGAAT-AGGATGGTTCGGAAATTAATATTTCAAAAGAGCCA  948
      ||| |||||||||| ||||||| |||||||||||||||||||||||||||
seq2  AAGAAAGGACGAATAAGGATGG-TCGGAAATTAATATTTCAAAAGAGCCA  948

seq1  TTTCAATAGATTCTTGTGAAACATTATGCATGTGATATATTCCTTCAATG  998
      |||| ||||| |  ||||||||| ||||||||||||||||| ||||||| 
seq2  TTTC-ATAGAATTCTGTGAAACA-TATGCATGTGATATATTTCTTCAATT  996

seq1  AACATCCCCTCCCTATAGAGAGCAAGTCCTCCTGACACACTCTTAAGGGA  1048
       ||||||||| |||||   ||   |||||| ||||| ||||||  | |||
seq2  GACATCCCCT-CCTAT---GAAACAGTCCT-CTGAC-CACTCT--AAGGA  1038

seq1  GTTTCTTCATCGAAGGAAATAGAAAATGAATAGGCTGCAATTATTAGAGT  1098
      |||||||||||||| |||||||||| |||  ||  |||| |  |||||||
seq2  GTTTCTTCATCGAA-GAAATAGAAACTGATAAGCTTGCATTATTTAGAGT  1087

seq1  ATG  1101
      |||
seq2  ATG  1090