BAC Information

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BAC

Clone NameB6Ng01-197C23
Chromosome16 (Build37)
Map Location 83,315,664 - 83,447,418
singlet/doubletdoublet
Overlap geneEG545172
Upstream geneEG665260
Downstream geneLOC100039572, EG621729, LOC640489, LOC665664
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-197C23.bB6Ng01-197C23.g
ACCGA019117GA019118
length1,1271,154
definitionB6Ng01-197C23.b B6Ng01-197C23.g
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(83,446,284 - 83,447,418)(83,315,664 - 83,316,820)
sequence
gaattctttgcccttttcagctttaaaggtttatctgatatctatctgta
aataaaaattaactccgattaatcatgattttaacactcagggaagcaaa
gaattattttctggaggatctccacattcaccaatagggaaaacacaccc
atgaaagagaaaacaagacaattttgttgacctgaagtatttatgaacag
cagtaggggaatgaaagtcccactggtatgaaaataaaaaagcagccagt
catgaattatttgttttgtaacttcaagggggaaacactgtaactagttt
tttagaagaggaaataacaaaagaccttttgtgtcgcttttagaaatgcc
ttttccctttcaccctcaaagaaaagatggatttacctatttttttttca
actgactgtttaaagtttaccttgtgtatttcaacattacagtctaggct
agatatttttaaacattcaactgcatgatatttgatttatcttatcaaaa
atagaataactagaatatatgtatagtacatgatcacttaataagttaat
agtctagaagaagttgctttaaaaagaattaaatatacattgactctaat
caaagaatgcaggaagtttctaggacaagagaacatttgtagagtaaatt
tttcttgccagtagacaaatgatttaaaatacttgctgatcatcaggacc
acactgagttgcaaaatctagaaagtaaagttgtaaatgcaagttctgat
gtgctactaaactattaagcaattaactaatataattgttacaaaaaagc
tttatgtccatacagggagtagtctgataggaaaaaaaaaaaggattttt
ctataaactatgaagcaaaaaataaaaatatttatgaattttatcttttc
tttaattctaaatctttaaatgttaatgaattatataagctctaaagaga
atattacttttaatttaatcttggagaattcaacacaatattttgaaacc
agacctttattttttggtctctacatttatttgtgtttacataaattggc
tgaaaatacagttcatgatatgttattataaattctatggataaattaga
attgaagtcataaagttaaagctattg

gaattcaaagaatgaagccataatgatgtcatttaactctttcagacaat
tcccgaatcgaggagagccttcggcctcaggttttaagtcctaagaacaa
aaagttcatcgacctcctttcttctctgctacagatttgtgttgttctat
gactgagcatacatttgtgtttgtatgtgtgtgtgtgtgtgtgtaatcat
taacataattttgatatttatgttttgttaacaagtttcctgtcaaggta
tatatacctttatgtattttattggaatttcaaaatattgagaaataaat
tagtgtaacatgtaagaaaaatatatatatatggatatctatatgtacaa
gtgtatattttcttcctgtaagtgctaaataaaaacatcataatgttata
aattaaatttatagacaaaaaaacaataaaatgtcctcactatttaagat
aggcagttactgggcttaatatctatggtcagaaccccaaaagataaaag
tatatttgttcagattctcataggaatgagagatgggcaattttccgtgg
catctcaaccagttgtcatctgactttttaaagcaatgtcaggtgactgt
ttgtccaggatgcgctgagtactgtcagtgatgtggaaacgaatatggcc
tgaggttcagcctgcacggggactgcctgaggtgagtggacagctgcgag
tggagaaaatcctactctacatttagctaaaattaggctctgtggagttt
ccacttttctttcccgctttaaaccacagggccatcaacagccaatctga
ggcctctcacacatgaaagctcttgggctatttgagaggagctttcgact
tcccctggagccttctcatctgcagattcaatatctgcaattcctgtaaa
ggaggcttcatctgtcatgctgtcaattcccttctcgatgctgggctcca
gctctgaatgtcatcctctttatcaatatctctctaaacgtcagtgatat
aactgacacaccgagattctacccaggacaggcagagctgtcactgtcct
gacttgagcctcacatcactgtcttaattctgcatgtctatcaaaataac
cgatgaaattgaccttttctggcaggtggttcacaatggactctatgcgt
tagc
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr16_83446284_83447418
seq2: B6Ng01-197C23.b_46_1172 (reverse)

seq1  CAATAAGCTTTAAACCTTTTATGACTCTCATTTCTAAATTTTATCCATTA  50
      |||| ||||||||    ||||||||| ||| ||||||  |||||||| ||
seq2  CAAT-AGCTTTAA---CTTTATGACT-TCAATTCTAA--TTTATCCA-TA  42

seq1  GAATTTATAATAACATTATCATGAACTGTATTTTCAGCCAATTTATGTAA  100
      ||||||||||||||| ||||||||||||||||||||||||||||||||||
seq2  GAATTTATAATAACA-TATCATGAACTGTATTTTCAGCCAATTTATGTAA  91

seq1  ACACAAATAAATGTAGAGACC-AAAAATAAAGGTCTGGTTTCAAAATATT  149
      ||||||||||||||||||||| ||||||||||||||||||||||||||||
seq2  ACACAAATAAATGTAGAGACCAAAAAATAAAGGTCTGGTTTCAAAATATT  141

seq1  GTGTTGAATTCTCCAAGATTAAATTAAAAGTAATATTCTCTTTAGAGCTT  199
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTGTTGAATTCTCCAAGATTAAATTAAAAGTAATATTCTCTTTAGAGCTT  191

seq1  ATATAATTCATTAACATTTAAAGATTTAGAATTAAAGAAAAGATAAAATT  249
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATATAATTCATTAACATTTAAAGATTTAGAATTAAAGAAAAGATAAAATT  241

seq1  CATAAATATTTTTATTTTTTGCTTCATAGTTTATAGAAAAATCCTTTTTT  299
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATAAATATTTTTATTTTTTGCTTCATAGTTTATAGAAAAATCCTTTTTT  291

seq1  TTTTTCCTATCAGACTACTCCCTGTATGGACATAAAGCTTTTTTGTAACA  349
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTTTCCTATCAGACTACTCCCTGTATGGACATAAAGCTTTTTTGTAACA  341

seq1  ATTATATTAGTTAATTGCTTAATAGTTTAGTAGCACATCAGAACTTGCAT  399
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTATATTAGTTAATTGCTTAATAGTTTAGTAGCACATCAGAACTTGCAT  391

seq1  TTACAACTTTACTTTCTAGATTTTGCAACTCAGTGTGGTCCTGATGATCA  449
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTACAACTTTACTTTCTAGATTTTGCAACTCAGTGTGGTCCTGATGATCA  441

seq1  GCAAGTATTTTAAATCATTTGTCTACTGGCAAGAAAAATTTACTCTACAA  499
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCAAGTATTTTAAATCATTTGTCTACTGGCAAGAAAAATTTACTCTACAA  491

seq1  ATGTTCTCTTGTCCTAGAAACTTCCTGCATTCTTTGATTAGAGTCAATGT  549
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGTTCTCTTGTCCTAGAAACTTCCTGCATTCTTTGATTAGAGTCAATGT  541

seq1  ATATTTAATTCTTTTTAAAGCAACTTCTTCTAGACTATTAACTTATTAAG  599
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATATTTAATTCTTTTTAAAGCAACTTCTTCTAGACTATTAACTTATTAAG  591

seq1  TGATCATGTACTATACATATATTCTAGTTATTCTATTTTTGATAAGATAA  649
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGATCATGTACTATACATATATTCTAGTTATTCTATTTTTGATAAGATAA  641

seq1  ATCAAATATCATGCAGTTGAATGTTTAAAAATATCTAGCCTAGACTGTAA  699
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATCAAATATCATGCAGTTGAATGTTTAAAAATATCTAGCCTAGACTGTAA  691

seq1  TGTTGAAATACACAAGGTAAACTTTAAACAGTCAGTTGAAAAAAAAATAG  749
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTTGAAATACACAAGGTAAACTTTAAACAGTCAGTTGAAAAAAAAATAG  741

seq1  GTAAATCCATCTTTTCTTTGAGGGTGAAAGGGAAAAGGCATTTCTAAAAG  799
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTAAATCCATCTTTTCTTTGAGGGTGAAAGGGAAAAGGCATTTCTAAAAG  791

seq1  CGACACAAAAGGTCTTTTGTTATTTCCTCTTCTAAAAAACTAGTTACAGT  849
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CGACACAAAAGGTCTTTTGTTATTTCCTCTTCTAAAAAACTAGTTACAGT  841

seq1  GTTTCCCCCTTGAAGTTACAAAACAAATAATTCATGACTGGCTGCTTTTT  899
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTTCCCCCTTGAAGTTACAAAACAAATAATTCATGACTGGCTGCTTTTT  891

seq1  TATTTTCATACCAGTGGGACTTTCATTCCCCTACTGCTGTTCATAAATAC  949
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATTTTCATACCAGTGGGACTTTCATTCCCCTACTGCTGTTCATAAATAC  941

seq1  TTCAGGTCAACAAAATTGTCTTGTTTTCTCTTTCATGGGTGTGTTTTCCC  999
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCAGGTCAACAAAATTGTCTTGTTTTCTCTTTCATGGGTGTGTTTTCCC  991

seq1  TATTGGTGAATGTGGAGATCCTCCAGAAAATAATTCTTTGCTTCCCTGAG  1049
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATTGGTGAATGTGGAGATCCTCCAGAAAATAATTCTTTGCTTCCCTGAG  1041

seq1  TGTTAAAATCATGATTAATCGGAGTTAATTTTTATTTACAGATAGATATC  1099
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTTAAAATCATGATTAATCGGAGTTAATTTTTATTTACAGATAGATATC  1091

seq1  AGATAAACCTTTAAAGCTGAAAAGGGCAAAGAATTC  1135
      ||||||||||||||||||||||||||||||||||||
seq2  AGATAAACCTTTAAAGCTGAAAAGGGCAAAGAATTC  1127


seq1: chr16_83315664_83316820
seq2: B6Ng01-197C23.g_63_1216

seq1  GAATTCAAAGAATGAAGCCATAATGATGTCATTTAACTCTTTCAGACAAT  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCAAAGAATGAAGCCATAATGATGTCATTTAACTCTTTCAGACAAT  50

seq1  TCCCGAATCGAGGAGAGCCTTCGGCCTCAGGTTTTAAGTCCTAAGAACAA  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCCGAATCGAGGAGAGCCTTCGGCCTCAGGTTTTAAGTCCTAAGAACAA  100

seq1  AAAGTTCATCGACCTCCTTTCTTCTCTGCTACAGATTTGTGTTGTTCTAT  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAGTTCATCGACCTCCTTTCTTCTCTGCTACAGATTTGTGTTGTTCTAT  150

seq1  GACTGAGCATACATTTGTGTTTGTATGTGTGTGTGTGTGTGTGTAATCAT  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GACTGAGCATACATTTGTGTTTGTATGTGTGTGTGTGTGTGTGTAATCAT  200

seq1  TAACATAATTTTGATATTTATGTTTTGTTAACAAGTTTCCTGTCAAGGTA  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAACATAATTTTGATATTTATGTTTTGTTAACAAGTTTCCTGTCAAGGTA  250

seq1  TATATACCTTTATGTATTTTATTGGAATTTCAAAATATTGAGAAATAAAT  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATATACCTTTATGTATTTTATTGGAATTTCAAAATATTGAGAAATAAAT  300

seq1  TAGTGTAACATGTAAGAAAAATATATATATATGGATATCTATATGTACAA  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAGTGTAACATGTAAGAAAAATATATATATATGGATATCTATATGTACAA  350

seq1  GTGTATATTTTCTTCCTGTAAGTGCTAAATAAAAACATCATAATGTTATA  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTGTATATTTTCTTCCTGTAAGTGCTAAATAAAAACATCATAATGTTATA  400

seq1  AATTAAATTTATAGACAAAAAAACAATAAAATGTCCTCACTATTTAAGAT  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATTAAATTTATAGACAAAAAAACAATAAAATGTCCTCACTATTTAAGAT  450

seq1  AGGCAGTTACTGGGCTTAATATCTATGGTCAGAACCCCAAAAGATAAAAG  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGCAGTTACTGGGCTTAATATCTATGGTCAGAACCCCAAAAGATAAAAG  500

seq1  TATATTTGTTCAGATTCTCATAGGAATGAGAGATGGGCAATTTTCCGTGG  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATATTTGTTCAGATTCTCATAGGAATGAGAGATGGGCAATTTTCCGTGG  550

seq1  CATCTCAACCAGTTGTCATCTGACTTTTTAAAGCAATGTCAGGTGACTGT  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATCTCAACCAGTTGTCATCTGACTTTTTAAAGCAATGTCAGGTGACTGT  600

seq1  TTGTCCAGGATGCGCTGAGTACTGTCAGTGATGTGGAAACGAATATGGCC  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGTCCAGGATGCGCTGAGTACTGTCAGTGATGTGGAAACGAATATGGCC  650

seq1  TGAGGTTCAGCCTGCACGGGGACTGCCTGAGGTGAGTGGACAGCTGCGAG  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGAGGTTCAGCCTGCACGGGGACTGCCTGAGGTGAGTGGACAGCTGCGAG  700

seq1  TGGAGAAAATCCTACTCTACATTTAGCTAAAATTAGGCTCTGTGGAGTTT  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGAGAAAATCCTACTCTACATTTAGCTAAAATTAGGCTCTGTGGAGTTT  750

seq1  CCACTTTTCTTTCCCGCTTTAAACCACAGGGCCATCAACAGCCAATCTGA  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCACTTTTCTTTCCCGCTTTAAACCACAGGGCCATCAACAGCCAATCTGA  800

seq1  GGCCTCTCACACATGAAAGCTCTTGGGCTATTTGAGAGGAGCTTTCGACT  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGCCTCTCACACATGAAAGCTCTTGGGCTATTTGAGAGGAGCTTTCGACT  850

seq1  TCCCCTGGAGCCTTCTCATCTGCAGATTCAATATCTGCAATTCCTGT-AA  899
      ||||||||||||||||||||||||||||||||||||||||||||||| ||
seq2  TCCCCTGGAGCCTTCTCATCTGCAGATTCAATATCTGCAATTCCTGTAAA  900

seq1  GGAGGCTTCATCTGTCATGCTGTCAATTCCCTTCTCGATGCTGGGCTCCA  949
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGAGGCTTCATCTGTCATGCTGTCAATTCCCTTCTCGATGCTGGGCTCCA  950

seq1  GCTCTGAATGTCATCCTCTTTATCAATATCTCTCTAAACGTCAGTGATTA  999
      ||||||||||||||||||||||||||||||||||||||||||||||| ||
seq2  GCTCTGAATGTCATCCTCTTTATCAATATCTCTCTAAACGTCAGTGA-TA  999

seq1  TAACTGAACACACCGAGATTCTACCCAAGGACAGGCAGAGCTGTCACTGT  1049
      |||||| ||||||||||||||||||| |||||||||||||||||||||||
seq2  TAACTG-ACACACCGAGATTCTACCC-AGGACAGGCAGAGCTGTCACTGT  1047

seq1  CCTGACTTTGAG-CTCACATCACTGTTCTTATTCTGCATGTCTATCAATA  1098
      |||||| ||||| |||||||||||||  | |||||||||||||||||| |
seq2  CCTGAC-TTGAGCCTCACATCACTGTCTTAATTCTGCATGTCTATCAAAA  1096

seq1  TAACCCGATGAAAATGACTTTTCTTGGCAGTGTGGTGCACAAT-GACTC-  1146
      ||| ||||||||| |||| |||  |||||| ||||| |||||| ||||| 
seq2  TAA-CCGATGAAATTGACCTTTTCTGGCAG-GTGGTTCACAATGGACTCT  1144

seq1  ATGCCGTTAGC  1157
      ||| |||||||
seq2  ATG-CGTTAGC  1154


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