BAC Information

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BAC

Clone NameB6Ng01-201B16
Chromosome16 (Build37)
Map Location 44,157,800 - 44,158,867
singlet/doubletsinglet
Overlap geneNat13
Upstream geneLOC667484, Zbtb20, LOC100043314, Drd3, Qtrtd1, 2610015P09Rik, Zdhhc23, Gramd1c, Atp6v1a
Downstream geneGm608, Sidt1, Ccdc52, Wdr52, Boc, LOC100043731, BC027231, Gtpbp8, Cd200r1, LOC271374, F630003A18Rik, Cd200r4, LOC546665, Cd200r2, Cd200r3, EG433021, Ccdc80, Slc35a5
LinkOpen Mouse BAC browser

no map image available.



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-201B16.bB6Ng01-201B16.g
ACCGA021972GA021973
length1,071662
definitionB6Ng01-201B16.b B6Ng01-201B16.g
singlet/doubletsinglet---
BLAST hituniqueno hit data
sequence
gaattctttgtgctaaaaaggggccttttctattagttttagacgtgtta
agttgcacagtgaggacaaatttggggaaataatgtatagatgcactcta
attctgtgtcaggacttagtaaagatagcaagtagatgtcaatttctagg
ttgatttataaggttactcatttattatttgttttattaataggaactaa
aatgttaaatcatgtcctaaacatctgtgagaaggatggcacttttgaca
atatctatctgtaagtaactaatgttcatcaagtgtctgataaattaatt
atcagtataaatccctatctgacagaaactgggatctactcactcattgt
attatttagttgaagaccccttgaaggtctgctagtctcttgataacact
aggggttgtgaaggggaggctggagaggcttcgtctgctaagagcattgg
ccgttcttccactgttcttccagagggccccaatttcattaccagcatcc
acatggtgtcttaaaatcatttgtagctccatttccagagatctgtcacc
ttcctttggtatataagtggtacacaggcatgtatgcaaacaaaaatgcc
tatacccataaaaaaaattttagaaaagaataaaatacattcatttaaaa
tgttataaatccatataaaaaggcatgctatttacagatgacctatgcct
atcttcccagtctttaaactgccctaatttacatgtctacaacaaataaa
atgctatagaagtttttattatgctgtactgtttaggaaatggtgtagaa
tagtacatatgttccattcagaatgactatttttaaattcagggttggtg
aattaaatttaaattcaagtttggtgggaaactgataatgtaggtgaact
acttttggtataatttgggttataattatatataaggaacctgagataaa
aaccaaaatcacattcagaattttgagaccattaatgccattaatagttg
atatattttattcagggtaacttgattatttactatagagtagagtttta
ttaaagtcaggagtagcttag

gaattccatgcctagaatcacaccacttaaagcggaggcaggaagatcag
gagttcaaggttgtgctcagctacaaagcaaatttgaggccagtctggaa
tacaccaaatcctgtttcaaaaccatgcacatgcaaaagaaatttgcata
tttctttataataagagtaacaaattttaccagccatctctgagataatc
tcctattgcatagggagcaaggatctctctatgtcagcatggcaaggctg
agagatagctcagcagtaagaatactactgctcttccagagggtcagagt
ttggttcccagccctaacatggtggcttacaaccacctgtaacttcagtt
cagagactctgacaccttcttctggcctctgcaggcacccacagacacat
acatacatacatacatacatacatacatacatacatacatacacacacac
acacacacacacatacacacatttacattaaaataaatcttttttaaaaa
ttccaacatggaggcaggaggggcatccaaggttccacctcctgctgtgg
ccctattgacagttgatggctgctacagtagggaaagtcacttttcttca
aggggtgaccaccagcaggttggccatgccctagtggaggaggaggagga
ggaggaggagga
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr16_44157800_44158867
seq2: B6Ng01-201B16.b_40_1110

seq1  GAATTCTTTGTGCTAAAAAGGGGCCTTTTCTATTAGTTTTAGACGTGTTA  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCTTTGTGCTAAAAAGGGGCCTTTTCTATTAGTTTTAGACGTGTTA  50

seq1  AGTTGCACAGTGAGGACAAATTTGGGGAAATAATGTATAGATGCACTCTA  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTTGCACAGTGAGGACAAATTTGGGGAAATAATGTATAGATGCACTCTA  100

seq1  ATTCTGTGTCAGGACTTAGTAAAGATAGCAAGTAGATGTCAATTTCTAGG  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTCTGTGTCAGGACTTAGTAAAGATAGCAAGTAGATGTCAATTTCTAGG  150

seq1  TTGATTTATAAGGTTACTCATTTATTATTTGTTTTATTAATAGGAACTAA  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGATTTATAAGGTTACTCATTTATTATTTGTTTTATTAATAGGAACTAA  200

seq1  AATGTTAAATCATGTCCTAAACATCTGTGAGAAGGATGGCACTTTTGACA  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATGTTAAATCATGTCCTAAACATCTGTGAGAAGGATGGCACTTTTGACA  250

seq1  ATATCTATCTGTAAGTAACTAATGTTCATCAAGTGTCTGATAAATTAATT  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATATCTATCTGTAAGTAACTAATGTTCATCAAGTGTCTGATAAATTAATT  300

seq1  ATCAGTATAAATCCCTATCTGACAGAAACTGGGATCTACTCACTCATTGT  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATCAGTATAAATCCCTATCTGACAGAAACTGGGATCTACTCACTCATTGT  350

seq1  ATTATTTAGTTGAAGACCCCTTGAAGGTCTGCTAGTCTCTTGATAACACT  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTATTTAGTTGAAGACCCCTTGAAGGTCTGCTAGTCTCTTGATAACACT  400

seq1  AGGGGTTGTGAAGGGGAGGCTGGAGAGGCTTCGTCTGCTAAGAGCATTGG  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGGGTTGTGAAGGGGAGGCTGGAGAGGCTTCGTCTGCTAAGAGCATTGG  450

seq1  CCGTTCTTCCACTGTTCTTCCAGAGGGCCCCAATTTCATTACCAGCATCC  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCGTTCTTCCACTGTTCTTCCAGAGGGCCCCAATTTCATTACCAGCATCC  500

seq1  ACATGGTGTCTTAAAATCATTTGTAGCTCCATTTCCAGAGATCTGTCACC  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACATGGTGTCTTAAAATCATTTGTAGCTCCATTTCCAGAGATCTGTCACC  550

seq1  TTCCTTTGGTATATAAGTGGTACACAGGCATGTATGCAAACAAAAATGCC  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCCTTTGGTATATAAGTGGTACACAGGCATGTATGCAAACAAAAATGCC  600

seq1  TATACCCATAAAAAAAATTTTAGAAAAGAATAAAATACATTCATTTAAAA  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATACCCATAAAAAAAATTTTAGAAAAGAATAAAATACATTCATTTAAAA  650

seq1  TGTTATAAATCCATATAAAAAGGCATGCTATTTACAGATGACCTATGCCT  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTTATAAATCCATATAAAAAGGCATGCTATTTACAGATGACCTATGCCT  700

seq1  ATCTTCCCAGTCTTTAAACTGCCCTAATTTACATGTCTACAACAAATAAA  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATCTTCCCAGTCTTTAAACTGCCCTAATTTACATGTCTACAACAAATAAA  750

seq1  ATGCTATAGAAGTTTTTATTATGCTGTACTGTTTAGGAAATGGTGTAGAA  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGCTATAGAAGTTTTTATTATGCTGTACTGTTTAGGAAATGGTGTAGAA  800

seq1  TAGTACATATGTTCCATTCAGAATGACTATTTTTAAATTCAGGGTTGGTG  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAGTACATATGTTCCATTCAGAATGACTATTTTTAAATTCAGGGTTGGTG  850

seq1  AATTAAATTTAAATTCAAG-TTGGTGGGAAACTGATAATGTAGGTGAACT  899
      ||||||||||||||||||| ||||||||||||||||||||||||||||||
seq2  AATTAAATTTAAATTCAAGTTTGGTGGGAAACTGATAATGTAGGTGAACT  900

seq1  ACTTTTGGTATAATTT-GGTTATAATTATATATAAGGAACCTGAGATAAA  948
      |||||||||||||||| |||||||||||||||||||||||||||||||||
seq2  ACTTTTGGTATAATTTGGGTTATAATTATATATAAGGAACCTGAGATAAA  950

seq1  AACCAAAATCACATTCAGAATTTTGAGACCATTAATGCCATTAATAGTTG  998
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACCAAAATCACATTCAGAATTTTGAGACCATTAATGCCATTAATAGTTG  1000

seq1  ATATATTTTATTCAAGGTAACTTGATTATTTACTATAGAGTAGAG-TTTA  1047
      |||||||||||||| |||||||||||||||||||||||||||||| ||||
seq2  ATATATTTTATTCAGGGTAACTTGATTATTTACTATAGAGTAGAGTTTTA  1050

seq1  ATAAAGTCAGAAGTAGCTTAG  1068
       ||||||||| ||||||||||
seq2  TTAAAGTCAGGAGTAGCTTAG  1071


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