BAC Information

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BAC

Clone NameB6Ng01-202D03
Chromosome16 (Build37)
Map Location 69,384,187 - 69,509,907
singlet/doubletdoublet
Overlap genenone
Upstream geneEG626609
Downstream geneSpeer2, EG664930, Gbe1
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-202D03.bB6Ng01-202D03.g
ACCGA022758GA022759
length1,014901
definitionB6Ng01-202D03.b B6Ng01-202D03.g
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(69,384,187 - 69,385,175)(69,509,008 - 69,509,907)
sequence
gaattcttgaacctttgaaaaagctggtctttgattttgttttcgttcag
atcttttcctctgctctgtcctttgcctttgttttcttctgaatccaatg
ttgtgttagttctagttttatttaattattttattttactttattttcat
cactcaaaagcttttctttttctgtctaatgagagacagaaagggagtag
atcctgataagaaaggatttgaagaggagatggtagcaggatatatgatg
taagaaaaagtctatttttaataaaaagtaagaagtaaaataaaatctga
taaaaagaaattgtttccgtactatcagcttatcttcaagccaatattct
taatgttgtatttacagattcaatgctctcttctggtagacaagcgctaa
gtaagactttctatattaggaagccatacaaatacaactgaggacttgtg
tgaaataacattatattcttcttcaatgtaaagtactccaaaacaaaaaa
aaatactaaatattatttaaaagatgatatgacagtatatataagtaacc
ctaaaaattccaccagagaactcctaaaactgttaaacagcttcggtgaa
gtagaaggatataaaattaactcaaacaagtcaatggcctttctctacac
aaagaataaacagggtgagaaagaaattagggaaacaacacccttctcaa
tagtcacaaataatttaaaatatcttggcgtgactctaactaaggaagtg
aaagatctgtatgacaagaacttcaagtctctgaagaaagaaattaaaaa
gatctcagaagatggaaagatctcccatgctcatggattggcaggatcaa
cattgtaaaaatggctatcttgccaaaagcaatctacagattcaatgcaa
tccccatcaaaattccaactcaattcttcaacgaaattagaaagagcaat
ctgcaaattcatctgaaataacaaaaaaccgaggatagcaaaactcttct
caaggaataaaaga

gaattctttgctacatatgtatctctggcctttattccctcctggatatt
tcatacaaattctgtggtcttacagttagtattttaatatcaaacaagta
tcttaatatttttaatagttattatgtagctccataaagtttttcagtta
atagttttatttagtagaaaagtaaggtcatgatgtgcttattacatata
attaagatcagaacattctctggtgatttaagtactaaatatataaaaat
ttaaacagagaagtgtaagaaacataaatgaaagaattactaaaattgag
gttaagttttaaaaaattccaaatctggaagaaattgttgttggaaaata
ttaaagtttagctctgaaatatatgactaaagtgaagagtaatatatatt
taaattacagagtaaaatgacaatgagagagagtaatggcgcatgtgaaa
agtaaattattaagaattaaaaatattgagttgataaattttctgaataa
acaccattacaaacaatatggatcttttaatatgttgatattgtatgtag
taaacagaggtattgagcacatacagccacacacccatacacacacacat
acacaaacacacatacacaaagtagttgtacaaaatattctgtgatttat
tgtttttaatgctattatgacagaattcagaaggaacaacctggaagaat
attttatttgaggttatggtttgcaaaatattatgactccattggtgcta
gaactaagctgaagaaccacataggttgaaagtatccagtgggttaaaag
taaaaaaaaaaaaaaaaaatctgaaggtgtactggaagaggaggaagaag
atagaatgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtg
t
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr16_69384187_69385175
seq2: B6Ng01-202D03.b_45_1034

seq1  GAATTCTTGAACCTTTGAAAAAGCTGGTCTTTGATTTTGTTTTCGTTCAG  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCTTGAACCTTTGAAAAAGCTGGTCTTTGATTTTGTTTTCGTTCAG  50

seq1  ATCTTTTCCTCTGCTCTGTCCTTTGCCTTTGTTTTCTTCTGAATCCAATG  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATCTTTTCCTCTGCTCTGTCCTTTGCCTTTGTTTTCTTCTGAATCCAATG  100

seq1  TTGTGTTAGTTCTAGTTTTATTTAATTATTTTATTTTACTTTATTTTCAT  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGTGTTAGTTCTAGTTTTATTTAATTATTTTATTTTACTTTATTTTCAT  150

seq1  CACTCAAAAGCTTTTCTTTTTCTGTCTAATGAGAGACAGAAAGGGAGTAG  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACTCAAAAGCTTTTCTTTTTCTGTCTAATGAGAGACAGAAAGGGAGTAG  200

seq1  ATCCTGATAAGAAAGGATTTGAAGAGGAGATGGTAGCAGGATATATGATG  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATCCTGATAAGAAAGGATTTGAAGAGGAGATGGTAGCAGGATATATGATG  250

seq1  TAAGAAAAAGTCTATTTTTAATAAAAAGTAAGAAGTAAAATAAAATCTGA  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAAGAAAAAGTCTATTTTTAATAAAAAGTAAGAAGTAAAATAAAATCTGA  300

seq1  TAAAAAGAAATTGTTTCCGTACTATCAGCTTATCTTCAAGCCAATATTCT  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAAAAAGAAATTGTTTCCGTACTATCAGCTTATCTTCAAGCCAATATTCT  350

seq1  TAATGTTGTATTTACAGATTCAATGCTCTCTTCTGGTAGACAAGCGCTAA  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAATGTTGTATTTACAGATTCAATGCTCTCTTCTGGTAGACAAGCGCTAA  400

seq1  GTAAGACTTTCTATATTAGGAAGCCATACAAATACAACTGAGGACTTGTG  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTAAGACTTTCTATATTAGGAAGCCATACAAATACAACTGAGGACTTGTG  450

seq1  TGAAATAACATTATATTCTTCTTCAATGTAAAGTACTCCAAAACAAAAAA  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGAAATAACATTATATTCTTCTTCAATGTAAAGTACTCCAAAACAAAAAA  500

seq1  AAATACTAAATATTATTTAAAAGATGATATGACAGTATATATAAGTAACC  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAATACTAAATATTATTTAAAAGATGATATGACAGTATATATAAGTAACC  550

seq1  CTAAAAATTCCACCAGAGAACTCCTAAAACTGTTAAACAGCTTCGGTGAA  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTAAAAATTCCACCAGAGAACTCCTAAAACTGTTAAACAGCTTCGGTGAA  600

seq1  GTAGAAGGATATAAAATTAACTCAAACAAGTCAATGGCCTTTCTCTACAC  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTAGAAGGATATAAAATTAACTCAAACAAGTCAATGGCCTTTCTCTACAC  650

seq1  AAAGAATAAACAGGGTGAGAAAGAAATTAGGGAAACAACACCCTTCTCAA  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAGAATAAACAGGGTGAGAAAGAAATTAGGGAAACAACACCCTTCTCAA  700

seq1  TAGTCACAAATAATTTAAAATATCTTGGCGTGACTCTAACTAAGGAAGTG  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAGTCACAAATAATTTAAAATATCTTGGCGTGACTCTAACTAAGGAAGTG  750

seq1  AAAGATCTGTATGACAAGAACTTCAAGTCTCTGAAGAAAGAAATTAAAAA  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAGATCTGTATGACAAGAACTTCAAGTCTCTGAAGAAAGAAATTAAAAA  800

seq1  GATCTCAGAAGATGGAAAGATCTCCCATGCTCATGGATTGGCAGGATCAA  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GATCTCAGAAGATGGAAAGATCTCCCATGCTCATGGATTGGCAGGATCAA  850

seq1  CATTGTAAAAATGGCTATCTTGCCAAAAGCAATCTACAGATTCAATGCAA  900
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATTGTAAAAATGGCTATCTTGCCAAAAGCAATCTACAGATTCAATGCAA  900

seq1  TCCCCATCAAAATTCCAACTCAATTCTTCAACG-AATTAGAAAGAGCAAT  949
      ||||||||||||||||||||||||||||||||| ||||||||||||||||
seq2  TCCCCATCAAAATTCCAACTCAATTCTTCAACGAAATTAGAAAGAGCAAT  950

seq1  CTGCAAATTCATCTGAAATAACAAAAAACCGAGGATAGCA  989
      ||||||||||||||||||||||||||||||||||||||||
seq2  CTGCAAATTCATCTGAAATAACAAAAAACCGAGGATAGCA  990


seq1: chr16_69509008_69509907
seq2: B6Ng01-202D03.g_64_964 (reverse)

seq1  ACACACACACACACACACACACACACACACACACACACACACACATTCTA  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACACACACACACACACACACACACACACACACACACACACACACATTCTA  50

seq1  TCTTCTTCCTCCTCTTCCAGTACACCTTCAGA--TTTTTTTTTTTTTTTT  98
      ||||||||||||||||||||||||||||||||  ||||||||||||||||
seq2  TCTTCTTCCTCCTCTTCCAGTACACCTTCAGATTTTTTTTTTTTTTTTTT  100

seq1  ACTTTTAACCCACTGGATACTTTCAACCTATGTGGTTCTTCAGCTTAGTT  148
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTTTTAACCCACTGGATACTTTCAACCTATGTGGTTCTTCAGCTTAGTT  150

seq1  CTAGCACCAATGGAGTCATAATATTTTGCAAACCATAACCTCAAATAAAA  198
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTAGCACCAATGGAGTCATAATATTTTGCAAACCATAACCTCAAATAAAA  200

seq1  TATTCTTCCAGGTTGTTCCTTCTGAATTTCTGTCATAATAGCATTAAAAA  248
      |||||||||||||||||||||||||| |||||||||||||||||||||||
seq2  TATTCTTCCAGGTTGTTCCTTCTGAA-TTCTGTCATAATAGCATTAAAAA  249

seq1  CAATAAATCACAGAATATTTTGTACAACTACTTTGTGTATGTGTGTTTGT  298
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAATAAATCACAGAATATTTTGTACAACTACTTTGTGTATGTGTGTTTGT  299

seq1  GTATGTGTGTGTGTATGGGTGTGTGGCTGTATGTGCTCAATACCTCTGTT  348
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTATGTGTGTGTGTATGGGTGTGTGGCTGTATGTGCTCAATACCTCTGTT  349

seq1  TACTACATACAATATCAACATATTAAAAGATCCATATTGTTTGTAATGGT  398
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TACTACATACAATATCAACATATTAAAAGATCCATATTGTTTGTAATGGT  399

seq1  GTTTATTCAGAAAATTTATCAACTCAATATTTTTAATTCTTAATAATTTA  448
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTTATTCAGAAAATTTATCAACTCAATATTTTTAATTCTTAATAATTTA  449

seq1  CTTTTCACATGCGCCATTACTCTCTCTCATTGTCATTTTACTCTGTAATT  498
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTTTCACATGCGCCATTACTCTCTCTCATTGTCATTTTACTCTGTAATT  499

seq1  TAAATATATATTACTCTTCACTTTAGTCATATATTTCAGAGCTAAACTTT  548
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAAATATATATTACTCTTCACTTTAGTCATATATTTCAGAGCTAAACTTT  549

seq1  AATATTTTCCAACAACAATTTCTTCCAGATTTGGAATTTTTTAAAACTTA  598
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATATTTTCCAACAACAATTTCTTCCAGATTTGGAATTTTTTAAAACTTA  599

seq1  ACCTCAATTTTAGTAATTCTTTCATTTATGTTTCTTACACTTCTCTGTTT  648
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACCTCAATTTTAGTAATTCTTTCATTTATGTTTCTTACACTTCTCTGTTT  649

seq1  AAATTTTTATATATTTAGTACTTAAATCACCAGAGAATGTTCTGATCTTA  698
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAATTTTTATATATTTAGTACTTAAATCACCAGAGAATGTTCTGATCTTA  699

seq1  ATTATATGTAATAAGCACATCATGACCTTACTTTTCTACTAAATAAAACT  748
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTATATGTAATAAGCACATCATGACCTTACTTTTCTACTAAATAAAACT  749

seq1  ATTAACTGAAAAACTTTATGGAGCTACATAATAACTATTAAAAATATTAA  798
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTAACTGAAAAACTTTATGGAGCTACATAATAACTATTAAAAATATTAA  799

seq1  GATACTTGTTTGATATTAAAATACTAACTGTAAGACCACAGAATTTGTAT  848
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GATACTTGTTTGATATTAAAATACTAACTGTAAGACCACAGAATTTGTAT  849

seq1  GAAATATCCAGGAGGGAATAAAGGCCAGAGATACATATGTAGCAAAGAAT  898
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAAATATCCAGGAGGGAATAAAGGCCAGAGATACATATGTAGCAAAGAAT  899

seq1  TC  900
      ||
seq2  TC  901


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