BAC Information

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BAC

Clone NameB6Ng01-202O10
Chromosome16 (Build37)
Map Location 75,575,394 - 75,576,574
singlet/doubletsinglet
Overlap genenone
Upstream geneLOC665042, D930038D03Rik
Downstream geneRbm11, Stch, LOC546667, Samsn1, 4930578N18Rik, LOC100039457, Nrip1, LOC100039316
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-202O10.bB6Ng01-202O10.g
ACCGA023269GA023270
length1,1771,203
definitionB6Ng01-202O10.b B6Ng01-202O10.g
singlet/doubletsinglet---
BLAST hituniqueno hit data
sequence
gaattcattttcatacaaatgaaacatgaggagcacctttgtaccaaaca
gtaatgtacactcaccccgaaaacccctacccactccccaaggcttatat
agctgttcataccccaataaaagtagctgtttcattgaaaatccatctga
gaagtccttttctgcccacactgagccaagagcctagaaacccgccaccc
tgcccaacaggtaagctttgtttcttccattttgagtaggtatgcaatgg
tgactggataccctgcaggcaaaagcagaactgagccagcaataaaatac
tgctaggaagttttatatatgtgtgtgcagtgtgtatatattaaacacat
taaagttatttttatagtatttgaattaaaatgagaaattatattattac
taaagatattaataatcacaagattttgtataatggcacaaagtataaaa
tacctttatctatctgttattacttgtctatcatctacctctgtattcat
ttattcacctacccatcctagaagaataaaggccagaaaaatgaaataac
taaaattgttgaatagcagtggtcactgtaagcagtaaaataatggctgc
tttatgtttagatttttgtagtttttccagaattgtgaattgttgaataa
gcatgagcataaaatatttttatgggtgcattgctttgtgctacatcttg
agcatcaatttagtaatactattttggaaacaaacttttcagtatttgtc
aaatatgtataaaagcattagtaaatacctaagcgatttaaaatttaaaa
attgaaaataaagggaaaataaaaacaagaagtaagaaatattattttaa
tattgtacataatatgcaatacttatgatcattctaactatgaaagtata
gatgcactattgctatacttacttacaggaaagaagctagctatggagct
ataatacctgcatagtattttcaggtcggtggagatgtaattaaagagct
ttgtaatactattagagaaaacaagaaattaagacagatagacccatggt
ggcttatcacttgcgatgctagcaaatttttattgaatcatacatccact
tcataatgccagggtctggacaagtgtgaactatccagataaatcaactc
tctgtataagacttgaatagactttac
gaattcaaggcccatacctaaacatgataaaagcaatctacagcaaacca
ggagccaacatcaaagtaaatggagagaagctggaatcaatcccactaaa
atcagggactagacaaggctgcccactttctccctaccttttcaacatag
tacttgaagtattagccagagcaattcgacaacaaaaggagatcaagggg
atacaaattggaaaggaggaagtcaaaatatcactttttgcagatgatat
gatagtatatataagtgaccctaaaaattccaccagagaactcctaaacc
tgataaacagcttcggtgaagtagctggatataaaattaactcaaacaag
tcaatggcctttctctacacaaagaataaacaggctgagaaagaaattag
ggaaacaacacccttctcaatagtcacaaataatataaaatatctcggag
tgactctaactaaggaagtgaaagatctgtatgataaaaacttcaagtct
ctgaagaaagaaattaaagaagatctcagaagatggaaagatctcccatg
ctcatggattggcaggatcaacattgtaaaaatggctatcttgccaaaag
caatctacagattcaatgcaatccccatcaaatttccaactcaattcttc
aacgaattagaaggagcaatttgcaaattcatctggaataacaaaaaacc
taggatagcaaaaactcttctcaaggataaaagaacttctggtggaatca
ccatgcctgacctaaagctttactacagagcaattgtggtaaaaactgca
tggtactggtatagagacagacaagtagaccaatggaatagaattgaaga
cccagaaatgaacccacatacctatggtcacttgatcttcgacaagggag
ctaaaaccatccagtggaagaaagacagcattttcaacaattggtgctgg
cacaactggttgttatcatgtagaagaatgcgaatcgatccatacttatc
tcttgtactaagtcaaatctaaatggaatcaaagaactcacaataaaacc
agaagaacaactgaaacttatagaagagaaagtgggggtaaaagcccttg
aaagatatggcacaaggaaaaattcctgaacagaacaggcattggccttg
gtctgtaaagaattcggagaattgaacaaaaatggggaacactaatgtgg
tac
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr16_75575394_75576574
seq2: B6Ng01-202O10.b_46_1222

seq1  GAATTCATTTTCATACAAATGAAACATGAGGAGCACCTTTGTACCAAACA  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCATTTTCATACAAATGAAACATGAGGAGCACCTTTGTACCAAACA  50

seq1  GTAATGTACACTCACCCCGAAAACCCCTACCCACTCCCCAAGGCTTATAT  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTAATGTACACTCACCCCGAAAACCCCTACCCACTCCCCAAGGCTTATAT  100

seq1  AGCTGTTCATACCCCAATAAAAGTAGCTGTTTCATTGAAAATCCATCTGA  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGCTGTTCATACCCCAATAAAAGTAGCTGTTTCATTGAAAATCCATCTGA  150

seq1  GAAGTCCTTTTCTGCCCACACTGAGCCAAGAGCCTAGAAACCCGCCACCC  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAAGTCCTTTTCTGCCCACACTGAGCCAAGAGCCTAGAAACCCGCCACCC  200

seq1  TGCCCAACAGGTAAGCTTTGTTTCTTCCATTTTGAGTAGGTATGCAATGG  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGCCCAACAGGTAAGCTTTGTTTCTTCCATTTTGAGTAGGTATGCAATGG  250

seq1  TGACTGGATACCCTGCAGGCAAAAGCAGAACTGAGCCAGCAATAAAATAC  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGACTGGATACCCTGCAGGCAAAAGCAGAACTGAGCCAGCAATAAAATAC  300

seq1  TGCTAGGAAGTTTTATATATGTGTGTGCAGTGTGTATATATTAAACACAT  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGCTAGGAAGTTTTATATATGTGTGTGCAGTGTGTATATATTAAACACAT  350

seq1  TAAAGTTATTTTTATAGTATTTGAATTAAAATGAGAAATTATATTATTAC  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAAAGTTATTTTTATAGTATTTGAATTAAAATGAGAAATTATATTATTAC  400

seq1  TAAAGATATTAATAATCACAAGATTTTGTATAATGGCACAAAGTATAAAA  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAAAGATATTAATAATCACAAGATTTTGTATAATGGCACAAAGTATAAAA  450

seq1  TACCTTTATCTATCTGTTATTACTTGTCTATCATCTACCTCTGTATTCAT  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TACCTTTATCTATCTGTTATTACTTGTCTATCATCTACCTCTGTATTCAT  500

seq1  TTATTCACCTACCCATCCTAGAAGAATAAAGGCCAGAAAAATGAAATAAC  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTATTCACCTACCCATCCTAGAAGAATAAAGGCCAGAAAAATGAAATAAC  550

seq1  TAAAATTGTTGAATAGCAGTGGTCACTGTAAGCAGTAAAATAATGGCTGC  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAAAATTGTTGAATAGCAGTGGTCACTGTAAGCAGTAAAATAATGGCTGC  600

seq1  TTTATGTTTAGATTTTTGTAGTTTTTCCAGAATTGTGAATTGTTGAATAA  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTATGTTTAGATTTTTGTAGTTTTTCCAGAATTGTGAATTGTTGAATAA  650

seq1  GCATGAGCATAAAATATTTTTATGGGTGCATTGCTTTGTGCTACATCTTG  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCATGAGCATAAAATATTTTTATGGGTGCATTGCTTTGTGCTACATCTTG  700

seq1  AGCATCAATTTAGTAATACTATTTTGGAAACAAACTTTTCAGTATTTGTC  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGCATCAATTTAGTAATACTATTTTGGAAACAAACTTTTCAGTATTTGTC  750

seq1  AAATATGTATAAAAGCATTAGTAAATACCTAAGCGATTTAAAATTTAAAA  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAATATGTATAAAAGCATTAGTAAATACCTAAGCGATTTAAAATTTAAAA  800

seq1  ATTGAAAATAAAGGGAAAATAAAAACAAGAAGTAAGAAATATTATTTTAA  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTGAAAATAAAGGGAAAATAAAAACAAGAAGTAAGAAATATTATTTTAA  850

seq1  TATTGTACATAATATGCAATACTTATGATCATTCTAACTATGAAAGTATA  900
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATTGTACATAATATGCAATACTTATGATCATTCTAACTATGAAAGTATA  900

seq1  GATGCACTATTGCTATACTTACTTACAGGAAAGAAGCTAGCTATGGAGCT  950
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GATGCACTATTGCTATACTTACTTACAGGAAAGAAGCTAGCTATGGAGCT  950

seq1  ATAATACCTGCATAGTATTTTCAGGTCGGTGGAGATGTAATTAAAAGAGC  1000
      |||||||||||||||||||||||||||||||||||||||||| |||||||
seq2  ATAATACCTGCATAGTATTTTCAGGTCGGTGGAGATGTAATT-AAAGAGC  999

seq1  TTTGTAATAACTATTAGAGAAAAACAAAGAAATAAAGAACAGATAGACCC  1050
      |||||||| ||||||||||||||   ||||||| ||| ||||||||||||
seq2  TTTGTAAT-ACTATTAGAGAAAA--CAAGAAATTAAG-ACAGATAGACCC  1045

seq1  ATGGTGGC-TATCAACTTGCGATGCTAAGCAAATTTT--ATGAATCATAC  1097
      |||||||| |||| |||||||||||| ||||||||||   ||||||||||
seq2  ATGGTGGCTTATC-ACTTGCGATGCT-AGCAAATTTTTATTGAATCATAC  1093

seq1  ATCCACCTCAT-ATGCCA-GGTCTGGACAAGTGTGGACTATTCAGATAAT  1145
      |||||| |||| |||||| |||||||||||||||| ||||| ||||||| 
seq2  ATCCACTTCATAATGCCAGGGTCTGGACAAGTGTGAACTATCCAGATAAA  1143

seq1  TCAAACTCCTTTGTTATAAGACTTG-ATAGACTTTAC  1181
      || |||| || || ||||||||||| |||||||||||
seq2  TC-AACT-CTCTG-TATAAGACTTGAATAGACTTTAC  1177