BAC Information

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BAC

Clone NameB6Ng01-203E01
Chromosome16 (Build37)
Map Location 8,148,076 - 8,149,199
singlet/doubletsinglet
Overlap genenone
Upstream geneA2bp1
Downstream gene4930511J11Rik, BC024814, Abat, LOC665207, Tmem186, Pmm2, Carhsp1, EG436336, Usp7, LOC665231, 1810013L24Rik, LOC100043106
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-203E01.bB6Ng01-203E01.g
ACCGA023519GA023520
length1,1581,187
definitionB6Ng01-203E01.b B6Ng01-203E01.g
singlet/doubletsinglet---
BLAST hituniqueno hit data
sequence
cgtggtcggaatccctattagggggggagggacccggggaatttcagctg
aagacttccactagacacatggaacctttttaaagagttgtgaagggcat
tgtgagcacccaggagtcagaggatctgggatctaggtacatccatgtgg
taaagtaatatggacaaaacttcaacagtatctaccacataggaagttaa
acagatctgctgtccgctgtcttgttccagtcaatgctattaaaaagaag
agcaatcgttcaattatttatttattttatttatttatttattggctaat
gcttctacagtatgagcttggatcagcaagtttaacttccttttgctcca
tgcaacccaggctataggatctactttgaagaggtcttactcatattatt
ggccatctagtgctcaatatcagtgagatttttaccagagctgaggtctg
gagttcctgccattatgggtctctctgtatagtctgagtttctttaaagc
attttgtcttagttccaaagcacaaagcccttgccattcatgaccttgga
actttaatagcactccttgggctactgtccactcataaaaattgtgtaga
gatcaagtcaagagactgcctctcaacagaggaggacagcaatccttgag
aagctgatgggttagaaaacgttcctgtagccctttgaggcagatgccat
ttgggaatctccaccagctttctgtgatcttgtcttagtggcgtgtgttt
gtggcactcacattggaatgtagaacttcccccattaggctcatgttttg
ggtacttgtccctccaactggtggcactatttgaggacactatggaggtc
ttgaagatggagcctgtctggtagaagcagagggttaaggatgggctttt
ggaggttccagcccactctctttcctgcacctcacactactatcaccaca
agtggagcatgctcaccctgtagtacctgctattatgcactaaagtactc
tgaaactgtgagccaaaataatcttaatgcccacaactagtttctgcaaa
gtatgttgccacatcagtgaaaaagtaataatattcttcttaaagactac
aaagaatctgaaagaggccagaggcaggtccctatgaacactatagtctg
agaaagaa
gaattctcacctgaggaataccgaatggctgagatgcacttaaaaatgtt
caacatccttagtcatcagggaaatgcaaatcaaaacaaccctgcatttc
tacctcacaccagtcagaatggctaatatcaaaaactcacatgacagcag
atggagaatcctgatgaggatgtggagaaagaggaacactcctccattgt
tggtgggattgcaagctggtacaaccactctggaaatcagtttggcggtt
cctcagaaaattggacatagtactaccggaaggtccagcaatacctctcc
tgggcatatacccagaagatgctcccacaggtaataaggacacatgctct
actttgttcatagcagccttatttataatagccagaagctggaaagaacc
cagacatccctcaacagagcaatggatacagaaaatatgatacatttaca
caatggagtactacttagctattaaaaacaatgaatttatgaaattctta
ggcaattggatgtatctggaggatatcatccttaatgaggtaacccaatc
acaaaagaacagacatgatatgcacttactgataagtggatattagctca
gaagcttggaatacccaagatacaatttgcaaaacacatgaaactgaaga
agaaggaagaccaaagtgtcaatccttcttagaatggggaacaaaatacc
catggaaggagttacagagacaaagtgtggcgcagaaactgaaggaatga
ccatccagagacttctcacctggggatctataccataaacaacaccaaat
tagacagtattgtggatgccaacaagagcttggtgacaggagcctgatat
agctgtctcctgaaaggctctgccagcgcctgacaaatacaaaggtggat
gctctcagccaaccattggactgagcacagggtccctaatggaggaaata
gagaaagaatgaaggaactgaggctgtttgcctttccaggagaggaacac
aatatgaaccgacagtaccctcagagctcccaggaactataccactacaa
agagtactcatgaaatgactatgctcagctgcatatgttagcagaggata
ggctgtagttaatatggaggaaaggtccttggctttggcagtctctatgc
tcactggtaaggaatgtaagggcccatgaaaccggta
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr16_8148076_8149199
seq2: B6Ng01-203E01.b_39_1158

seq1  GAATTCCAGCTGAAGACTTCCACTAGACACATGGAA-GTTTTTAAAGAGT  49
      ||||| ||||||||||||||||||||||||||||||  ||||||||||||
seq2  GAATTTCAGCTGAAGACTTCCACTAGACACATGGAACCTTTTTAAAGAGT  50

seq1  TGTGAAGGGCATTGTGAGCACCCAGGAGTCAGAGGATCTGGGATCTAGGT  99
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTGAAGGGCATTGTGAGCACCCAGGAGTCAGAGGATCTGGGATCTAGGT  100

seq1  ACATCCATGTGGTAAAGTAATATGGACAAAACTTCAACAGTATCTACCAC  149
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACATCCATGTGGTAAAGTAATATGGACAAAACTTCAACAGTATCTACCAC  150

seq1  ATAGGAAGTTAAACAGATCTGCTGTCCGCTGTCTTGTTCCAGTCAATGCT  199
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATAGGAAGTTAAACAGATCTGCTGTCCGCTGTCTTGTTCCAGTCAATGCT  200

seq1  ATTAAAAAGAAGAGCAATCGTTCAATTATTTATTTATTTTATTTATTTAT  249
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTAAAAAGAAGAGCAATCGTTCAATTATTTATTTATTTTATTTATTTAT  250

seq1  TTATTGGCTAATGCTTCTACAGTATGAGCTTGGATCAGCAAGTTTAACTT  299
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTATTGGCTAATGCTTCTACAGTATGAGCTTGGATCAGCAAGTTTAACTT  300

seq1  CCTTTTGCTCCATGCAACCCAGGCTATAGGATCTACTTTGAAGAGGTCTT  349
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTTTTGCTCCATGCAACCCAGGCTATAGGATCTACTTTGAAGAGGTCTT  350

seq1  ACTCATATTATTGGCCATCTAGTGCTCAATATCAGTGAGATTTTTACCAG  399
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTCATATTATTGGCCATCTAGTGCTCAATATCAGTGAGATTTTTACCAG  400

seq1  AGCTGAGGTCTGGAGTTCCTGCCATTATGGGTCTCTCTGTATAGTCTGAG  449
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGCTGAGGTCTGGAGTTCCTGCCATTATGGGTCTCTCTGTATAGTCTGAG  450

seq1  TTTCTTTAAAGCATTTTGTCTTAGTTCCAAAGCACAAAGCCCTTGCCATT  499
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTCTTTAAAGCATTTTGTCTTAGTTCCAAAGCACAAAGCCCTTGCCATT  500

seq1  CATGACCTTGGAACTTTAATAGCACTCCTTGGGCTACTGTCCACTCATAA  549
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATGACCTTGGAACTTTAATAGCACTCCTTGGGCTACTGTCCACTCATAA  550

seq1  AAATTGTGTAGAGATCAAGTCAAGAGACTGCCTCTCAACAGAGGAGGACA  599
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAATTGTGTAGAGATCAAGTCAAGAGACTGCCTCTCAACAGAGGAGGACA  600

seq1  GCAATCCTTGAGAAGCTGATGGGTTAGAAAACGTTCCTGTAGCCCTTTGA  649
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCAATCCTTGAGAAGCTGATGGGTTAGAAAACGTTCCTGTAGCCCTTTGA  650

seq1  GGCAGATGCCATTTGGGAATCTCCACCAGCTTTCTGTGATCTTGTCTTAG  699
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGCAGATGCCATTTGGGAATCTCCACCAGCTTTCTGTGATCTTGTCTTAG  700

seq1  TGGCGTGTGTTTGTGGCACTCACATTGGAATGTAGAACTTCCCCCATTAG  749
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGCGTGTGTTTGTGGCACTCACATTGGAATGTAGAACTTCCCCCATTAG  750

seq1  GCTCATGTTTTGGGTACTTGTCCCTCCAACTGGTGGCACTATTTGAGGAC  799
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCTCATGTTTTGGGTACTTGTCCCTCCAACTGGTGGCACTATTTGAGGAC  800

seq1  ACTATGGAGGTCTTGAAGATGGAGCCTGTCTGGTAGAAGCAGAGGGTTAA  849
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTATGGAGGTCTTGAAGATGGAGCCTGTCTGGTAGAAGCAGAGGGTTAA  850

seq1  GGATGGGCTTTTGGAGGTTCCAGCCCACTCTCTTTCCTGCACCTCACACT  899
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGATGGGCTTTTGGAGGTTCCAGCCCACTCTCTTTCCTGCACCTCACACT  900

seq1  ACTATCACCACAAGTGGAGCATGCTCACCCTGTAGTACCTGCTATTATGC  949
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTATCACCACAAGTGGAGCATGCTCACCCTGTAGTACCTGCTATTATGC  950

seq1  ACTAAAGTACTCTGAAACTGTGAGCCAAAATAAATCTTAATGCCCACAAC  999
      ||||||||||||||||||||||||||||||| ||||||||||||||||||
seq2  ACTAAAGTACTCTGAAACTGTGAGCCAAAAT-AATCTTAATGCCCACAAC  999

seq1  TAGTTTCTGCAAAGTATGTTGCCACATCAGTGAAAAAAGTTAATATATTC  1049
      |||||||||||||||||||||||||||||||| ||||||| |  ||||||
seq2  TAGTTTCTGCAAAGTATGTTGCCACATCAGTG-AAAAAGTAATAATATTC  1048

seq1  -TCTTAAAGGAACTACAAAGAAATCTGAAAGAGGCCAGAGGGCAGTTCCC  1098
       ||||||||  ||||||||| |||||||||||||||||| ||||| ||||
seq2  TTCTTAAAG--ACTACAAAG-AATCTGAAAGAGGCCAGA-GGCAGGTCCC  1094

seq1  TATAGACACTATAGTCTGAGAGAGAA  1124
      |||  |||||||||||||||| ||||
seq2  TATGAACACTATAGTCTGAGAAAGAA  1120