BAC Information

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BAC

Clone NameB6Ng01-212I03
Chromosome16 (Build37)
Map Location 62,549,503 - 62,695,782
singlet/doubletdoublet
Overlap genenone
Upstream genenone
Downstream geneLOC100043806, Nsun3, Arl13b, Stx19, Pros1, Epha3
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-212I03.bB6Ng01-212I03.g
ACCGA030284GA030285
length1,1211,010
definitionB6Ng01-212I03.b B6Ng01-212I03.g
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(62,694,668 - 62,695,782)(62,549,503 - 62,550,363)
sequence
gaattctgtcaactcaggttcatatttttagttaaaagtttgaaacacga
aggctgaggagatggctaattgggttaaagcactcctgaggaagcctgga
gttcaaactcccagtacctatgtaaaataatctggttaatgtgtagttct
gtaattctggcattctgggacacagagacacagtggccaattcactgaga
catactggctgccagcttagctacaggcttagtgagagaccctgcctcaa
gggtataaggcagagtccgtagaagatagacaaccaaagtcctcttctat
aagtgagtttgtgtatatactacactcaaacaaacacaagtaaataagca
aatacattcaaagaaaatagaggtttcaaactatgggtttagaagcctac
acacagactaagtcagtgggaacctaagaagatctgggatgtacaacttc
tgcaggggtgtgtatctgatgcagtgtgtgtatctggggctggggatgtg
tagcttctgtaggggtatgtggctgatgaaagggtgtgtagctgatacag
gggtgagtgtagctgctgttaggtggtgtgccctgtgaatatgatcattg
gagtctacaaataatgtagagaagattcataagtgtgtttgacatttcta
ctgtccaggacctgttcattgctatgtttttcccaaccaacatcagggtg
tagatcagctgaattaacaaagcctcagttctcagggaagatgatatctt
ggtgttctgaagaggagcagaactatagagcaaggccagttgctatatac
ttcatccccttcttgatgcacatttgctcaaatttgtctaacagagattt
ggataactgaataagcactaagatcatcaaaactgatatcaatctttgac
cccatagtttcactttgaacagtacgaaagaaagaatttaaattacaggg
acatctagtacagattatttgtaagtgtaagaattgaagaaatgcttttc
aattcaactgattttcctacagcatttttctctgaaaccaggtttggaag
aaacaaagaacaaaaacggttgtcctgctcctcatgccactatcaatcca
cggggaaggatggaaataatg

gaattccccacaaggaataatagaaagaacacatcaaaccgtaaaagccc
aactcctaaaacaaaaggcaaccacctatccccctaatgtataatgaatg
atggctctgattaccctaaacatttaacatctacaaaaaaactccaaaca
tcctcctatatccctctattggcacacagcaaaattagcacacacacaca
cacacacacacacacacacacacacacacaccccatcctaatatgatagg
gaaaccctttggatggaaattggaagggaccagaccccctccttacaacc
aggagaaaagaccacacctcaccaccgaccaagaagatggcctgccatct
ggcagatcaaggacagaactttctgtttctccacaggggggaaaaagggg
gagtctaaggaataataataacattaaataagatttaaaatgaatcagaa
taggacaaagtaaacaacagaataaaaaaagccaaacaattgcactgtat
tttctctttctaatgagagggaggaagaaagagtggattttgggaggtgg
agagatgagaggagctggggaggagaaacctaatcatgatatcgtgcatg
aaaaagatttattttcaattaaaaaaaggaataaaaaaagaaaaccctag
taccatttgaatgaatttgtcattgccctgaatgttacccatcaacttga
gagaaaccatgaagtgattgtgacagcgatgggggatgctcctatttgtc
tcagtttcagtaccactgtccattctgccaagctgaagaccataatctgc
agccttggccaccttgaaagggtcacactaacatgtccctggtaggaatc
cagtttcaactgcctagaaacattagtttttaaaatatttgctttggctg
cgccagtgagggtggctcagaggaataagtgcttgagaacctgggttcga
tcccaaaaccccctgagaggagagtgaagaaaccacctggctgtaagttg
tctctctgac
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr16_62694668_62695782
seq2: B6Ng01-212I03.b_41_1161 (reverse)

seq1  CATTATTT-CATCCTTCCCCGTGGATTG-TAGTTGCATGA-GAGCAGGAC  47
      |||||||| ||||||||||||||||||| |||| |||||| |||||||||
seq2  CATTATTTCCATCCTTCCCCGTGGATTGATAGTGGCATGAGGAGCAGGAC  50

seq1  AAC--GTTTTGTTCTTTGTTTCCTCCAAACCTTGTTTCAGAG-AAAATGC  94
      |||   |||||||||||||||| ||||||||| ||||||||| |||||||
seq2  AACCGTTTTTGTTCTTTGTTTCTTCCAAACCTGGTTTCAGAGAAAAATGC  100

seq1  TGTAGGAAAATCAGTTGAATTGAAAAGCATTTCTTCAATTCTTACACTTA  144
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTAGGAAAATCAGTTGAATTGAAAAGCATTTCTTCAATTCTTACACTTA  150

seq1  CAAATAATCTGTACTAGATGTCCCTGTAATTTAAATTCTTTCTTTCGTAC  194
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAAATAATCTGTACTAGATGTCCCTGTAATTTAAATTCTTTCTTTCGTAC  200

seq1  TGTTCAAAGTGAAACTATGGGGTCAAAGATTGATATCAGTTTTGATGATC  244
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTTCAAAGTGAAACTATGGGGTCAAAGATTGATATCAGTTTTGATGATC  250

seq1  TTAGTGCTTATTCAGTTATCCAAATCTCTGTTAGACAAATTTGAGCAAAT  294
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTAGTGCTTATTCAGTTATCCAAATCTCTGTTAGACAAATTTGAGCAAAT  300

seq1  GTGCATCAAGAAGGGGATGAAGTATATAGCAACTGGCCTTGCTCTATAGT  344
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTGCATCAAGAAGGGGATGAAGTATATAGCAACTGGCCTTGCTCTATAGT  350

seq1  TCTGCTCCTCTTCAGAACACCAAGATATCATCTTCCCTGAGAACTGAGGC  394
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTGCTCCTCTTCAGAACACCAAGATATCATCTTCCCTGAGAACTGAGGC  400

seq1  TTTGTTAATTCAGCTGATCTACACCCTGATGTTGGTTGGGAAAAACATAG  444
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTGTTAATTCAGCTGATCTACACCCTGATGTTGGTTGGGAAAAACATAG  450

seq1  CAATGAACAGGTCCTGGACAGTAGAAATGTCAAACACACTTATGAATCTT  494
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAATGAACAGGTCCTGGACAGTAGAAATGTCAAACACACTTATGAATCTT  500

seq1  CTCTACATTATTTGTAGACTCCAATGATCATATTCACAGGGCACACCACC  544
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCTACATTATTTGTAGACTCCAATGATCATATTCACAGGGCACACCACC  550

seq1  TAACAGCAGCTACACTCACCCCTGTATCAGCTACACACCCTTTCATCAGC  594
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAACAGCAGCTACACTCACCCCTGTATCAGCTACACACCCTTTCATCAGC  600

seq1  CACATACCCCTACAGAAGCTACACATCCCCAGCCCCAGATACACACACTG  644
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACATACCCCTACAGAAGCTACACATCCCCAGCCCCAGATACACACACTG  650

seq1  CATCAGATACACACCCCTGCAGAAGTTGTACATCCCAGATCTTCTTAGGT  694
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATCAGATACACACCCCTGCAGAAGTTGTACATCCCAGATCTTCTTAGGT  700

seq1  TCCCACTGACTTAGTCTGTGTGTAGGCTTCTAAACCCATAGTTTGAAACC  744
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCCACTGACTTAGTCTGTGTGTAGGCTTCTAAACCCATAGTTTGAAACC  750

seq1  TCTATTTTCTTTGAATGTATTTGCTTATTTACTTGTGTTTGTTTGAGTGT  794
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTATTTTCTTTGAATGTATTTGCTTATTTACTTGTGTTTGTTTGAGTGT  800

seq1  AGTATATACACAAACTCACTTATAGAAGAGGACTTTGGTTGTCTATCTTC  844
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTATATACACAAACTCACTTATAGAAGAGGACTTTGGTTGTCTATCTTC  850

seq1  TACGGACTCTGCCTTATACCCTTGAGGCAGGGTCTCTCACTAAGCCTGTA  894
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TACGGACTCTGCCTTATACCCTTGAGGCAGGGTCTCTCACTAAGCCTGTA  900

seq1  GCTAAGCTGGCAGCCAGTATGTCTCAGTGAATTGGCCACTGTGTCTCTGT  944
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCTAAGCTGGCAGCCAGTATGTCTCAGTGAATTGGCCACTGTGTCTCTGT  950

seq1  GTCCCAGAATGCCAGAATTACAGAACTACACATTAACCAGATTATTTTAC  994
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTCCCAGAATGCCAGAATTACAGAACTACACATTAACCAGATTATTTTAC  1000

seq1  ATAGGTACTGGGAGTTTGAACTCCAGGCTTCCTCAGGAGTGCTTTAACCC  1044
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATAGGTACTGGGAGTTTGAACTCCAGGCTTCCTCAGGAGTGCTTTAACCC  1050

seq1  AATTAGCCATCTCCTCAGCCTTCGTGTTTCAAACTTTTAACTAAAAATAT  1094
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATTAGCCATCTCCTCAGCCTTCGTGTTTCAAACTTTTAACTAAAAATAT  1100

seq1  GAACCTGAGTTGACAGAATTC  1115
      |||||||||||||||||||||
seq2  GAACCTGAGTTGACAGAATTC  1121


seq1: chr16_62549503_62550363
seq2: B6Ng01-212I03.g_203_1074

seq1  AAACTCCAAACATCCTCCTATATCCCTCTATTGGCACACAGCAAAATTAG  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAACTCCAAACATCCTCCTATATCCCTCTATTGGCACACAGCAAAATTAG  50

seq1  CACACACACACACACACACACACACACACACACACACACACACCCCATCC  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACACACACACACACACACACACACACACACACACACACACACCCCATCC  100

seq1  TAATATGATAGGGAAACCCTTTGGATGGAAATTGGAAGGGACCAGACCCC  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAATATGATAGGGAAACCCTTTGGATGGAAATTGGAAGGGACCAGACCCC  150

seq1  CTCCTTACAACCAGGAGAAAAGACCACACCTCACCACCGACCAAGAAGAT  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCCTTACAACCAGGAGAAAAGACCACACCTCACCACCGACCAAGAAGAT  200

seq1  GGCCTGCCATCTGGCAGATCAAGGACAGAACTTTCTGTTTCTCCACAGGG  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGCCTGCCATCTGGCAGATCAAGGACAGAACTTTCTGTTTCTCCACAGGG  250

seq1  GGGAAAAAGGGGGAGTCTAAGGAATAATAATAACATTAAATAAGATTTAA  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGGAAAAAGGGGGAGTCTAAGGAATAATAATAACATTAAATAAGATTTAA  300

seq1  AATGAATCAGAATAGGACAAAGTAAACAACAGAATAAAAAAAGCCAAACA  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATGAATCAGAATAGGACAAAGTAAACAACAGAATAAAAAAAGCCAAACA  350

seq1  ATTGCACTGTATTTTCTCTTTCTAATGAGAGGGAGGAAGAAAGAGTGGAT  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTGCACTGTATTTTCTCTTTCTAATGAGAGGGAGGAAGAAAGAGTGGAT  400

seq1  TTTGGGAGGTGGAGAGATGAGAGGAGCTGGGGAGGAGAAACCTAATCATG  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTGGGAGGTGGAGAGATGAGAGGAGCTGGGGAGGAGAAACCTAATCATG  450

seq1  ATATCGTGCATGAAAAAGATTTATTTTCAATTAAAAAAAGGAAT--AAAA  498
      ||||||||||||||||||||||||||||||||||||||||||||  ||||
seq2  ATATCGTGCATGAAAAAGATTTATTTTCAATTAAAAAAAGGAATAAAAAA  500

seq1  AGAAAACCCTAGTACCA-TTGAATGAATTTGTCATTGCCCTGAATGTTAC  547
      ||||||||||||||||| ||||||||||||||||||||||||||||||||
seq2  AGAAAACCCTAGTACCATTTGAATGAATTTGTCATTGCCCTGAATGTTAC  550

seq1  CCATCAACTTGAGAG-AACCATGAAGTGATTGTGACAGCGAT-GGGGATG  595
      ||||||||||||||| |||||||||||||||||||||||||| |||||||
seq2  CCATCAACTTGAGAGAAACCATGAAGTGATTGTGACAGCGATGGGGGATG  600

seq1  CTCCTATTTGTCTCAGTTTCAGTACCACTGTCCATTCTGCCAAGCTGAAG  645
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCCTATTTGTCTCAGTTTCAGTACCACTGTCCATTCTGCCAAGCTGAAG  650

seq1  ACCATAATCTGCAGCC-TGGCCACCTAGAAA-GGTCACACTAACATGT-C  692
      |||||||||||||||| ||||||||| |||| |||||||||||||||| |
seq2  ACCATAATCTGCAGCCTTGGCCACCTTGAAAGGGTCACACTAACATGTCC  700

seq1  CTGGCAGGAAGTCAGCTTCAACTGCCTAGAAACATTAG-TTTTAAAATA-  740
      |||| |||||  ||| |||||||||||||||||||||| |||||||||| 
seq2  CTGGTAGGAATCCAGTTTCAACTGCCTAGAAACATTAGTTTTTAAAATAT  750

seq1  TTGCTTTGGCTGCAGCCAGTGA-GGTGGCTCAGGAGGAATAAGTGCTTGA  789
      ||||||||||||| |||||||| ||||||||| |||||||||||||||||
seq2  TTGCTTTGGCTGC-GCCAGTGAGGGTGGCTCA-GAGGAATAAGTGCTTGA  798

seq1  GAACCTGGGTTCGATACCCAGAACACCCCTGAGAGGAGAGTGA--GAACC  837
      ||||||||||||||| |||| ||| ||||||||||||||||||   ||||
seq2  GAACCTGGGTTCGAT-CCCAAAAC-CCCCTGAGAGGAGAGTGAAGAAACC  846

seq1  ACCT-GCTGTAAGTTGT-TCTCTGAC  861
      |||| |||||||||||| ||||||||
seq2  ACCTGGCTGTAAGTTGTCTCTCTGAC  872


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