BAC Information

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BAC

Clone NameB6Ng01-212J24
Chromosome16 (Build37)
Map Location 41,358,712 - 41,359,825
singlet/doubletsinglet
Overlap genenone
Upstream genenone
Downstream geneEG667450, Lsamp, Gap43
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-212J24.bB6Ng01-212J24.g
ACCGA030374GA030375
length1,1921,117
definitionB6Ng01-212J24.b B6Ng01-212J24.g
singlet/doublet---singlet
BLAST hitno hit dataunique
sequence
gaattcatcttcggccaggagggaggtccaaacaccagatatctgtgcac
cttccctgtaaaaggagagcttgcctgcagagagtgctctgaccattgaa
actcagaggagagagctagtctcccatgtctgctgatagagactaacaga
atcaccagaggaacaatctctaaccagagacaactataacaactaactcc
agagattaccagatggcaaaaggtaaacataagagtcttactaacagaaa
ccaagaccactcaccatcatcagaacccagcactcccacttcgcctagtc
cagggcacccggacacacccgaaaatctagacccgtatttaaaagcatat
ctcatgataatggtagaggacatcaagaaggcctttaataactcacttaa
agaaatacagaagaacactgctaaacaggtagaagaccttaaagaggaag
cacaaaaatcccttaaagaattgcaggaaaacacaaccaaacagatgatg
gaattgaataaaaccatccaagaaataaaaagggaagtagatacaataaa
gaaaacccaaagtgaggcaacactggagatagaaaccctagaaaagaaat
ctggaaccatagatgcaagcatcagcaacagaatacaagagatgaaagag
agaatctcagatgcagaagattccatagagaacatcggcataacaatcaa
agaaaatggaaaatgcaaagagatcctaactcaaaacattcaggaaatcc
aggacacaatgagaagaccaaacctacggataataggagtagatgagaat
gaagattttcaactcaaaggaccagcaaatatcttcaacaaaattataga
agaaaacttcccaaacctaaagaaagagatgcccatgaacatacaagaag
cctacagaactccaaatagagtagaccagaaaaaaaaatttcctcccgac
acataataatcagaacaacagatgcacaaaaataaagatagatattaaaa
gcagtaagggaaaaaaggtcaagtaacataataaaaggcagccctatcag
actacacagatttttcaccagagactatgaaggccaggagagcttgcata
gattgttatagagaccttaagagaaccacaatgctttccaggctactata
ctagtcaacttcaataacgtaattgggaaatgaaagtattta
gaattctgggaagggaaagtgcactatctcattaaagaaatacatggttc
ctttctctttggtatgcatgatttcaaggtggctgagggcttctcttaac
caggagattaaccagctcagttgaattaactctttcatgttttgggtaga
gtgctagttctccacctaggcttttccttaatggccttccagacagagcc
tgaatagaggctccaataactgaagtaggactagaagaaccaaaaatgat
tcagaggtacatgcagggaattaaacccttcattatgcagtctagttgat
gctttctgccaatcggaaagcaagacctccagcacaattagaatttgttc
tgaagactccagacctagagataatattccttttatattagacctttgtg
ttaaagtaacaataagccatgcttaaggcctgaatgcaaatggctttcgg
tactgcctcattcctttcctggacataaagatagtgtcccttctggcttc
cttgagaattagacttccaccttatggactttaattggttccccctggag
agccatcctgcagtctcatttaagttccatggcaaccctttgaagagaat
ggcttcaaaatttgctcaaaccctgtacctacatgttgtaagacagtgaa
gtgtggccttaattctgatgctcacaaccctttctcttttttgacatctt
ttccccaaaagcgtctctttccttgtgtttattctggtgcttaattctgt
attttaaaaaggcttttagtacactccaactttcttcatactgagtagtc
cagaagttgctcttttctctacctaagctaagcacccagttttatctgaa
gcacggtcaatacagcggaagaaactccaggctgttgtacagtaatgtgg
aactgtgtctccatccccgttgcctttgatattgccatgttgtagctaaa
gaaattatcatattcctctagttacagtagttgttattgtttgaaatgag
aaatggataggacccctactccacttctcataagcttaccaaccctggca
atctggggccatagcacaggtgatggcttgcctgctgcgtgctaacatct
ttgtttatcacaacact
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr16_41358712_41359825
seq2: B6Ng01-212J24.g_65_1181

seq1  GAATTCTGGGAAGGGAAAGTGCACTATCTCATTAAAGAAATACATGGTTC  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCTGGGAAGGGAAAGTGCACTATCTCATTAAAGAAATACATGGTTC  50

seq1  CTTTCTCTTTGGTATGCATGATTTCAAGGTGGCTGAGGGCTTCTCTTAAC  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTTCTCTTTGGTATGCATGATTTCAAGGTGGCTGAGGGCTTCTCTTAAC  100

seq1  CAGGAGATTAACCAGCTCAGTTGAATTAACTCTTTCATGTTTTGGGTAGA  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGGAGATTAACCAGCTCAGTTGAATTAACTCTTTCATGTTTTGGGTAGA  150

seq1  GTGCTAGTTCTCCACCTAGGCTTTTCCTTAATGGCCTTCCAGACAGAGCC  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTGCTAGTTCTCCACCTAGGCTTTTCCTTAATGGCCTTCCAGACAGAGCC  200

seq1  TGAATAGAGGCTCCAATAACTGAAGTAGGACTAGAAGAACCAAAAATGAT  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGAATAGAGGCTCCAATAACTGAAGTAGGACTAGAAGAACCAAAAATGAT  250

seq1  TCAGAGGTACATGCAGGGAATTAAACCCTTCATTATGCAGTCTAGTTGAT  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCAGAGGTACATGCAGGGAATTAAACCCTTCATTATGCAGTCTAGTTGAT  300

seq1  GCTTTCTGCCAATCGGAAAGCAAGACCTCCAGCACAATTAGAATTTGTTC  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCTTTCTGCCAATCGGAAAGCAAGACCTCCAGCACAATTAGAATTTGTTC  350

seq1  TGAAGACTCCAGACCTAGAGATAATATTCCTTTTATATTAGACCTTTGTG  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGAAGACTCCAGACCTAGAGATAATATTCCTTTTATATTAGACCTTTGTG  400

seq1  TTAAAGTAACAATAAGCCATGCTTAAGGCCTGAATGCAAATGGCTTTCGG  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTAAAGTAACAATAAGCCATGCTTAAGGCCTGAATGCAAATGGCTTTCGG  450

seq1  TACTGCCTCATTCCTTTCCTGGACATAAAGATAGTGTCCCTTCTGGCTTC  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TACTGCCTCATTCCTTTCCTGGACATAAAGATAGTGTCCCTTCTGGCTTC  500

seq1  CTTGAGAATTAGACTTCCACCTTATGGACTTTAATTGGTTCCCCCTGGAG  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTGAGAATTAGACTTCCACCTTATGGACTTTAATTGGTTCCCCCTGGAG  550

seq1  AGCCATCCTGCAGTCTCATTTAAGTTCCATGGCAACCCTTTGAAGAGAAT  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGCCATCCTGCAGTCTCATTTAAGTTCCATGGCAACCCTTTGAAGAGAAT  600

seq1  GGCTTCAAAATTTGCTCAAACCCTGTACCTACATGTTGTAAGACAGTGAA  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGCTTCAAAATTTGCTCAAACCCTGTACCTACATGTTGTAAGACAGTGAA  650

seq1  GTGTGGCCTTAATTCTGATGCTCACAACCCTTTCTCTTTTTTGACATCTT  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTGTGGCCTTAATTCTGATGCTCACAACCCTTTCTCTTTTTTGACATCTT  700

seq1  TTCCCCAAAAGCGTCTCTTTCCTTGTGTTTATTCTGGTGCTTAATTCTGT  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCCCCAAAAGCGTCTCTTTCCTTGTGTTTATTCTGGTGCTTAATTCTGT  750

seq1  ATTTTAAAAAGGCTTTTAGTACACTCCAACTTTCTTCATACTGAGTAGTC  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTTTAAAAAGGCTTTTAGTACACTCCAACTTTCTTCATACTGAGTAGTC  800

seq1  CAGAAGTTGCTCTTTTCTCTACCTAAGCTAAGCACCCAGTTTTATCTGAA  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGAAGTTGCTCTTTTCTCTACCTAAGCTAAGCACCCAGTTTTATCTGAA  850

seq1  GCACGGTCAATACAGCGGAAGAAACTCCAGGCTGTTGTACAGTAATGTGG  900
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCACGGTCAATACAGCGGAAGAAACTCCAGGCTGTTGTACAGTAATGTGG  900

seq1  AACTGTGTCTCCATCCCCGTTGCCTTTGATATTGCCATGTTGTAGCTAAA  950
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACTGTGTCTCCATCCCCGTTGCCTTTGATATTGCCATGTTGTAGCTAAA  950

seq1  GAAATTATCATATT-CTCTAGTTACAGTAG-TGTTATTGTTTGAAATGAG  998
      |||||||||||||| ||||||||||||||| |||||||||||||||||||
seq2  GAAATTATCATATTCCTCTAGTTACAGTAGTTGTTATTGTTTGAAATGAG  1000

seq1  AAATGGATAGGA-CCCTACTCCAC-TCTCATTAGCTTACCAACCCTGCAA  1046
      |||||||||||| ||||||||||| |||||| |||||||||||||||  |
seq2  AAATGGATAGGACCCCTACTCCACTTCTCATAAGCTTACCAACCCTGGCA  1050

seq1  ATCTGGGGCATAAGCACAGGTTGTATGGC-TGCCTGCTGCGTGCCTACAT  1095
      |||||||||   |||||||||   ||||| ||||||||||||||  ||||
seq2  ATCTGGGGCCATAGCACAGGT--GATGGCTTGCCTGCTGCGTGCTAACAT  1098

seq1  CTTTGTTTATCACAACACT  1114
      |||||||||||||||||||
seq2  CTTTGTTTATCACAACACT  1117