BAC Information

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BAC

Clone NameB6Ng01-213L05
Chromosome16 (Build37)
Map Location 41,752,074 - 41,881,080
singlet/doubletdoublet
Overlap geneLsamp
Upstream geneEG667450
Downstream geneGap43
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-213L05.bB6Ng01-213L05.g
ACCGA031150GA031151
length1,1761,143
definitionB6Ng01-213L05.b B6Ng01-213L05.g
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(41,879,905 - 41,881,080)(41,752,074 - 41,753,222)
sequence
gaattcacatctggaaccctagattcctccagcaaggccacacctcctaa
gctttcccatacaggatcaccaacttgcaaccaaacattcaagtgctagt
aactatggggtacttcccattcaaaagactacagtgtaaaagtatcctca
tgaatgcttttgtgactagatagctcagacaatgtttcccccagtctcct
tccagtccatcatgttctataaatggcaaacccaaaatatatctttcctt
caggaaagctagaatggaagacagccgttggttagtgctgtgggttgtgt
tcagcacagatctgcaggcccagctggggaacctcttgggttatattagg
cttaacccatgtgttgtatgtcttgggaagtccatgttgcatgaataaag
cctacaccttcccagaaagcaagtgttaggtataccatcaccaaagtagc
aagggtctccaatcctttcggtttgaactacagattctccattcagcccc
atacagtttagaggatacaaagcaacatttccaatcttgcttttgttctg
attctccctgcaattctctgttctccattaaaaaaatattcctttcacca
agaatgagaaaaatcaaacttccctaggttatatctttgaaagactaaaa
ttagtcttgggatctgcctctgatgtgcacttaaaatcttcatgcgctat
gcaattaaaaacaattccacagctatttgggggaagattctgttaccttg
tgagtcattacaaaataaatatcaaaaatatgctaagttctaaaaggaaa
aataatgaggtctataccatataggctttactctttatctcattccagca
gtaaggagagagaaaagtgcttacaataaattatgaggcactttggatga
gcattctgatgtatgaggcatggctgtacagtcagaagactgttcttcat
aagtctcacttgaaacccagctccttactttatagtcttatcatatccag
cattatgcaaatgctgccattggagcagaccacattatatatgagtcatc
attgcattacatgcatttagatatattcagatcaattgttgccaagacat
gacattaatagaatcagcatgcatgccatttacagagtttaggccaatag
aaaataaggtattgcaaataattgac

gaattctttggcaaacatggtcttccacatgtgaatcatatttttttttc
ttttttcttttttcttctctctctctctttctgtcttttttattggatat
tttccttgtttacatttcaaatgttatcccctttcctggtcctccctgga
aattctctccccacctctgctccccctgcctctatgaggttgttccccca
cccttatccccactcctgcctcccttccctagcattcccctaccctggag
cactgagccttcacaagaccaagagtctctcctcccattgatgcctgaca
aagctgacctctgcttcatatgtggctggagccatggatccctccatgtg
tactctatttcattggtggcttagttcctgtgagctctggggtgtctggt
tggttgatattgttgttcttcccatggggttgcaaatgccttcataaagg
gaaactttatgtccaaacaagaacactcttgtagaaataaaatatgccaa
agagattttatctaacagaaatatttatgttctgaccaatgagcctaact
acaaattataaagatattcttaagaatactgtgttattgccgggcgtggt
ggcccacgcctttaatcccagcactagggaggcagaggcaggaggatttc
tgagttcgaggccagcctggtctacaaagtgagttccaggacagccagga
ctatacagagaaaccctgtctagaaaatcaaaatcaaaaaaaaaaaaaaa
aaagaaaaaaacaaaacaagaacaaaaacaaaaacaaaaaacatactgtg
ttatcacttctaatacataccatacataaagtttggggaaaaatgatttc
taattggcaattgctttgtcgggatttatctttgggtggttcaacttagt
gatatccacttgtcaaatattctacagccctttaatggtattaaataatc
agggattttcagctgttagctggtgtggtatttttttttaatgatctgaa
attgatttttttccctaggtacatatgacttcagatccctctatttcctg
accaggcaatttatctacatctctttcagggacttgaagaaggcagggtc
tctactcattgtccttggaaatccttaattggttgactagact
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr16_41879905_41881080
seq2: B6Ng01-213L05.b_43_1218 (reverse)

seq1  GTCATTTATTTGC-ATA-CTTATTTTCTATGTGC--TAACTCTGT-AATG  45
      |||| |||||||| ||| ||||||||||||  ||   |||||||| ||||
seq2  GTCAATTATTTGCAATACCTTATTTTCTATTGGCCTAAACTCTGTAAATG  50

seq1  GCATGCATGCTGTATCTATTAATTGTCATGTCTTGGCACAATTTGATCTG  95
      ||||||||||||  |||||||| |||||||||||||||  | ||||||||
seq2  GCATGCATGCTGATTCTATTAA-TGTCATGTCTTGGCAACAATTGATCTG  99

seq1  AATTATATCTAAATGCATGTAATGCAATGATGACTCATATTATAATGTGG  145
      || |||||||||||||||||||||||||||||||||||| ||||||||||
seq2  AA-TATATCTAAATGCATGTAATGCAATGATGACTCATA-TATAATGTGG  147

seq1  TTCTGCTCCAATGGCAGCATTTGCATAATGCTGGATATGATAAGACTATA  195
       |||||||||||||||||||||||||||||||||||||||||||||||||
seq2  -TCTGCTCCAATGGCAGCATTTGCATAATGCTGGATATGATAAGACTATA  196

seq1  AAGTAAGGAGCTGGGTTTTCAAGTGAGACTTATGAAGAACAGTCTTCTGA  245
      ||||||||||||||| ||||||||||||||||||||||||||||||||||
seq2  AAGTAAGGAGCTGGG-TTTCAAGTGAGACTTATGAAGAACAGTCTTCTGA  245

seq1  CTGTACAGCCATGCCTCATACATCAGAATGCTCATCCAAAGTGCCTCATA  295
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGTACAGCCATGCCTCATACATCAGAATGCTCATCCAAAGTGCCTCATA  295

seq1  ATTTATTGTAAGCACTTTTCTCTCTCCTTACTGCTGGAATGAGATAAAGA  345
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTTATTGTAAGCACTTTTCTCTCTCCTTACTGCTGGAATGAGATAAAGA  345

seq1  GTAAAGCCTATATGGTATAGACCTCATTATTTTTCCTTTTAGAACTTAGC  395
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTAAAGCCTATATGGTATAGACCTCATTATTTTTCCTTTTAGAACTTAGC  395

seq1  ATATTTTTGATATTTATTTTGTAATGACTCACAAGGTAACAGAATCTTCC  445
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATATTTTTGATATTTATTTTGTAATGACTCACAAGGTAACAGAATCTTCC  445

seq1  CCCAAATAGCTGTGGAATTGTTTTTAATTGCATAGCGCATGAAGATTTTA  495
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCCAAATAGCTGTGGAATTGTTTTTAATTGCATAGCGCATGAAGATTTTA  495

seq1  AGTGCACATCAGAGGCAGATCCCAAGACTAATTTTAGTCTTTCAAAGATA  545
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTGCACATCAGAGGCAGATCCCAAGACTAATTTTAGTCTTTCAAAGATA  545

seq1  TAACCTAGGGAAGTTTGATTTTTCTCATTCTTGGTGAAAGGAATATTTTT  595
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAACCTAGGGAAGTTTGATTTTTCTCATTCTTGGTGAAAGGAATATTTTT  595

seq1  TTAATGGAGAACAGAGAATTGCAGGGAGAATCAGAACAAAAGCAAGATTG  645
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTAATGGAGAACAGAGAATTGCAGGGAGAATCAGAACAAAAGCAAGATTG  645

seq1  GAAATGTTGCTTTGTATCCTCTAAACTGTATGGGGCTGAATGGAGAATCT  695
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAAATGTTGCTTTGTATCCTCTAAACTGTATGGGGCTGAATGGAGAATCT  695

seq1  GTAGTTCAAACCGAAAGGATTGGAGACCCTTGCTACTTTGGTGATGGTAT  745
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTAGTTCAAACCGAAAGGATTGGAGACCCTTGCTACTTTGGTGATGGTAT  745

seq1  ACCTAACACTTGCTTTCTGGGAAGGTGTAGGCTTTATTCATGCAACATGG  795
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACCTAACACTTGCTTTCTGGGAAGGTGTAGGCTTTATTCATGCAACATGG  795

seq1  ACTTCCCAAGACATACAACACATGGGTTAAGCCTAATATAACCCAAGAGG  845
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTTCCCAAGACATACAACACATGGGTTAAGCCTAATATAACCCAAGAGG  845

seq1  TTCCCCAGCTGGGCCTGCAGATCTGTGCTGAACACAACCCACAGCACTAA  895
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCCCCAGCTGGGCCTGCAGATCTGTGCTGAACACAACCCACAGCACTAA  895

seq1  CCAACGGCTGTCTTCCATTCTAGCTTTCCTGAAGGAAAGATATATTTTGG  945
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCAACGGCTGTCTTCCATTCTAGCTTTCCTGAAGGAAAGATATATTTTGG  945

seq1  GTTTGCCATTTATAGAACATGATGGACTGGAAGGAGACTGGGGGAAACAT  995
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTTGCCATTTATAGAACATGATGGACTGGAAGGAGACTGGGGGAAACAT  995

seq1  TGTCTGAGCTATCTAGTCACAAAAGCATTCATGAGGATACTTTTACACTG  1045
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTCTGAGCTATCTAGTCACAAAAGCATTCATGAGGATACTTTTACACTG  1045

seq1  TAGTCTTTTGAATGGGAAGTACCCCATAGTTACTAGCACTTGAATGTTTG  1095
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAGTCTTTTGAATGGGAAGTACCCCATAGTTACTAGCACTTGAATGTTTG  1095

seq1  GTTGCAAGTTGGTGATCCTGTATGGGAAAGCTTAGGAGGTGTGGCCTTGC  1145
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTGCAAGTTGGTGATCCTGTATGGGAAAGCTTAGGAGGTGTGGCCTTGC  1145

seq1  TGGAGGAATCTAGGGTTCCAGATGTGAATTC  1176
      |||||||||||||||||||||||||||||||
seq2  TGGAGGAATCTAGGGTTCCAGATGTGAATTC  1176


seq1: chr16_41752074_41753222
seq2: B6Ng01-213L05.g_66_1208

seq1  GAATTCTTTGGCAAACA-GGTCTTCCACATGTGAATCATATTTTTTTTTC  49
      ||||||||||||||||| ||||||||||||||||||||||||||||||||
seq2  GAATTCTTTGGCAAACATGGTCTTCCACATGTGAATCATATTTTTTTTTC  50

seq1  TTTTTTCTTTTTTCTTCTCTCTCTCTCTTTCTGTCTTTTTTATTGGATAT  99
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTTTTCTTTTTTCTTCTCTCTCTCTCTTTCTGTCTTTTTTATTGGATAT  100

seq1  TTTCCTTGTTTACATTTCAAATGTTATCCCCTTTCCTGGTCCTCCCTGGA  149
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTCCTTGTTTACATTTCAAATGTTATCCCCTTTCCTGGTCCTCCCTGGA  150

seq1  AATTCTCTCCCCACCTCTGCTCCCCCTGCCTCTATGAGGTTGTTCCCCCA  199
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATTCTCTCCCCACCTCTGCTCCCCCTGCCTCTATGAGGTTGTTCCCCCA  200

seq1  CCCTTATCCCCACTCCTGCCTCCCTTCCCTAGCATTCCCCTACCCTGGAG  249
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCCTTATCCCCACTCCTGCCTCCCTTCCCTAGCATTCCCCTACCCTGGAG  250

seq1  CACTGAGCCTTCACAAGACCAAGAGTCTCTCCTCCCATTGATGCCTGACA  299
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACTGAGCCTTCACAAGACCAAGAGTCTCTCCTCCCATTGATGCCTGACA  300

seq1  AAGCTGACCTCTGCTTCATATGTGGCTGGAGCCATGGATCCCTCCATGTG  349
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGCTGACCTCTGCTTCATATGTGGCTGGAGCCATGGATCCCTCCATGTG  350

seq1  TACTCTATTTCATTGGTGGCTTAGTTCCTGTGAGCTCTGGGGTGTCTGGT  399
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TACTCTATTTCATTGGTGGCTTAGTTCCTGTGAGCTCTGGGGTGTCTGGT  400

seq1  TGGTTGATATTGTTGTTCTTCCCATGGGGTTGCAAATGCCTTCATAAAGG  449
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGTTGATATTGTTGTTCTTCCCATGGGGTTGCAAATGCCTTCATAAAGG  450

seq1  GAAACTTTATGTCCAAACAAGAACACTCTTGTAGAAATAAAATATGCCAA  499
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAAACTTTATGTCCAAACAAGAACACTCTTGTAGAAATAAAATATGCCAA  500

seq1  AGAGATTTTATCTAACAGAAATATTTATGTTCTGACCAATGAGCCTAACT  549
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAGATTTTATCTAACAGAAATATTTATGTTCTGACCAATGAGCCTAACT  550

seq1  ACAAATTATAAAGATATTCTTAAGAATACTGTGTTATTGCCGGGCGTGGT  599
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACAAATTATAAAGATATTCTTAAGAATACTGTGTTATTGCCGGGCGTGGT  600

seq1  GGCCCACGCCTTTAATCCCAGCACTAGGGAGGCAGAGGCAGGAGGATTTC  649
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGCCCACGCCTTTAATCCCAGCACTAGGGAGGCAGAGGCAGGAGGATTTC  650

seq1  TGAGTTCGAGGCCAGCCTGGTCTACAAAGTGAGTTCCAGGACAGCCAGGA  699
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGAGTTCGAGGCCAGCCTGGTCTACAAAGTGAGTTCCAGGACAGCCAGGA  700

seq1  CTATACAGAGAAACCCTGTCTAGAAAATCAAAATCAAAAAAAAAAAAAAA  749
      ||||||||||||||||||||||||||||||||||| ||||||||||||||
seq2  CTATACAGAGAAACCCTGTCTAGAAAATCAAAATC-AAAAAAAAAAAAAA  749

seq1  AAAAGAAAAAAACAAAAACAAGAACAAAAACAAAAACAAAAAACAATACT  799
      ||||||||||||| |||||||||||||||||||||||||||||| |||||
seq2  AAAAGAAAAAAAC-AAAACAAGAACAAAAACAAAAACAAAAAAC-ATACT  797

seq1  GTGTTATCACTTCTAATACATACCATACATAAAGTTT-GGGAAAAATGAT  848
      ||||||||||||||||||||||||||||||||||||| ||||||||||||
seq2  GTGTTATCACTTCTAATACATACCATACATAAAGTTTGGGGAAAAATGAT  847

seq1  TTCTAATTGGCAATTGC-TTGTCGGAATTTATCTTT-GGTGGTTCAACTT  896
      ||||||||||||||||| ||||||| |||||||||| |||||||||||||
seq2  TTCTAATTGGCAATTGCTTTGTCGGGATTTATCTTTGGGTGGTTCAACTT  897

seq1  AGTGATATCCACTTGTCAAAATATCTACAGCC--TTAAATGTATTAAATA  944
      ||||||||||||||||||||   |||||||||  ||||  ||||||||||
seq2  AGTGATATCCACTTGTCAAATATTCTACAGCCCTTTAATGGTATTAAATA  947

seq1  ATCAGGAATTTTCAGCTGTTAGCT-GTGTGGTATTTTTTTTTAAATGATC  993
      |||||| ||||||||||||||||| ||||||||||||||||| |||||||
seq2  ATCAGGGATTTTCAGCTGTTAGCTGGTGTGGTATTTTTTTTT-AATGATC  996

seq1  TGAATTTGATTTTTTTTCCCTAGGTACATTATGACTTCTAGATCCCCTCT  1043
      |||| |||| |||||||||||||||||| ||||||||| |||| ||||||
seq2  TGAAATTGA-TTTTTTTCCCTAGGTACA-TATGACTTC-AGAT-CCCTCT  1042

seq1  ATTTTCTCTAAACAAGCAAATTTATCTTACATTCCTCTTTCAGGGACTTG  1093
      |||| ||    || ||  |||||||| |||||  ||||||||||||||||
seq2  ATTTCCT---GACCAGGCAATTTATC-TACAT--CTCTTTCAGGGACTTG  1086

seq1  AAAGAAAGGCAAGGGCTTCTACTCATTGTTCTTTGAATATCTTAATTGG-  1142
      ||   ||||| ||||  |||||||||||| ||| |||   ||||||||| 
seq2  AA--GAAGGC-AGGGTCTCTACTCATTGTCCTTGGAAATCCTTAATTGGT  1133

seq1  ---GTAGACT  1149
          ||||||
seq2  TGACTAGACT  1143


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