BAC Information

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BAC

Clone NameB6Ng01-216P06
Chromosome16 (Build37)
Map Location 89,915,092 - 89,916,274
singlet/doubletsinglet
Overlap geneTiam1
Upstream geneLOC100040191, AY026312, Krtap16-10, EG621595, LOC100040167, 1110032D16Rik, LOC100040201, Krtap6-1, LOC100040214, Krtap16-8, 1110025L11Rik, LOC100040249, LOC100040267, EG622794, LOC100040281, ENSMUSG00000044227, EG665661, LOC100040288, EG622935, EG622981, EG622998, EG623011, EG623026, LOC100040346, EG623049, LOC100040415, EG640636, LOC640652, LOC640654, LOC100040425, LOC100040374, LOC640656, LOC100040445, LOC100040456, Krtap21-1, Krtap6-2, 5430433J05Rik
Downstream geneLOC100040496, LOC640694, LOC100040440, Sod1, Sfrs15, LOC545175, Hunk, 2610039C10Rik, Mrap, 4921511H13Rik, 4931408A02Rik, LOC665863
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-216P06.bB6Ng01-216P06.g
ACCGA033503GA033504
length1,1701,207
definitionB6Ng01-216P06.b B6Ng01-216P06.g
singlet/doubletsinglet---
BLAST hituniqueno hit data
sequence
gaattctttccccatgaggctccaaaaaaaaaaaaaattttttttttttg
agacccacttgcctttgcctcctgagtgctggtaccagcacacctggttc
agtctccatcttttagaagaagatccaagactggaatttatagactagga
tgtatcataagatggatcaacataggtatattcaaagggcttgaagtccc
gggtccctgtctggactcctagtacaaaacacacttccactcacagtcat
tttcaaatataaggcatctttccaaatgacctcaatacttcacttgaaga
tcacttcaggttgtttgctaactacacaattaagacttcaagttttagca
gacgaagcacaatcatttcatgatttcaagaacaaacgaacaatttccgc
tttaggagctctgaaactgaatgcatcttaatagcacaatggtatatttg
gctttaattggcagatacttttctcccttcccagtgtggcatcaagcaat
ggtgcatcttacaaacaatgaacggagtgcgtataaatagattttataat
agttatatttggactggctaaaacctgtctaaaaactgtcaatgttttca
gctcaagtagaattatccaggtaaaagctataccattccgtagagctcag
ccaaggcttgctgagcagatgatgtatgcccgaggtgagggacgagacca
ttttctcggggtgcccataacccggaaagaagggtgaccactaacttgcc
cacaagcaatggctgcttgctctgtattagcgaatgagggaatagatcag
ctctgcaagtcagctgttggacctggtctttaaagggaagcaacatctag
cttaagaggatgagaagaaatggccagggatgggatctactgtaccaaag
aggaagggaaaattaaataaataaaagatttctagaattaaaacatacta
ctttgaacctgttatagtatcgaaaacaaaaactaaaaatgcttttttaa
agagaaaaaatttgaaattatctcttctgtgatatcagttcatgcttcta
taataaacacttattgctgataatctgtaacagtggaaatgttatccctc
caaggtcctggaattctaagtctcaattcagaaagcggggcgaactggct
tcaggtaagggctgcttctc
gaattctcctctgaggaaacagactgggaggaagaagcagcccattacca
gccagctaattggtcaagaaaaaagccaaaagcggctggcgaaggccagt
ttgctgattggcctcagggcagtcggcttcaaggtccgccctatgcggag
tccccgccctgcgtagtgcgtcagcaatgcgcagagaggcagtgcgcaga
gaggcagtgcgcagactcattcattcccagagaggaacaaaggaaaatac
aacaggcatttccagtctttgaaggagccgagggtgggcgtgtccacgct
ccggtagaatacttacaaattaaagaaattgccgagtcggtccgtaaata
tggaaccaatgctaattttaccttggtgaagttagacaggctcgctggca
tggcactaactcctgctgactggcaaacggttgtaaaagccgctctccct
agtatgggcaaatacatggaatggagagcgctttggcacgaagctgcaca
agcgcaggcccgagcaaacgcagctgctttgactccagagcagagagatt
ggacttttgacttgttaacgggtcagggagcttattctgctgatcagaca
aactaccattggggagcttatgcccagatttcttccacggctattagggc
ctggaaagcgctctctcgagcaggtgaaaccactggtcagttaacaaaga
taatccagggacctcaggaatccttctcagattttgtggccagaatgaca
gagggcagcagagcgtatttttggagagtcagagcaagctgcgcctctaa
tagaacagctaatctatgagcaagccacaaaggagtgccgagcggccata
gccccaagaagaacaaaggcttacaagactggctcagggtctgtcagaga
gcttgggggacctctcagcaatgcaaggtttagcggctgccatccttcaa
tcccaaaccgcttccatgagcagaaatgatcaaaggacatgtttaactgc
ggaaagcctggcatttagaaaagatggcagagctccagaataaacaggga
ggactcctcactctttgctctaagtgtgcaggttatcatagagctgaaca
gtgctcgctcgtggaggaattaaaaggcaaagtcctcccactgaaggtca
aatcactgtatgtgcccaaaaactggactatctggcccctcgggtcctca
gaggatc
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr16_89915092_89916274
seq2: B6Ng01-216P06.b_46_1215

seq1  GAATTCTTTCCCCATGAGGCTCCAAAAAAAAAAAAAATTTTTTTTTTTTG  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCTTTCCCCATGAGGCTCCAAAAAAAAAAAAAATTTTTTTTTTTTG  50

seq1  AGACCCACTTGCCTTTGCCTCCTGAGTGCTGGTACCAGCACACCTGGTTC  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGACCCACTTGCCTTTGCCTCCTGAGTGCTGGTACCAGCACACCTGGTTC  100

seq1  AGTCTCCATCTTTTAGAAGAAGATCCAAGACTGGAATTTATAGACTAGGA  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTCTCCATCTTTTAGAAGAAGATCCAAGACTGGAATTTATAGACTAGGA  150

seq1  TGTATCATAAGATGGATCAACATAGGTATATTCAAAGGGCTTGAAGTCCC  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTATCATAAGATGGATCAACATAGGTATATTCAAAGGGCTTGAAGTCCC  200

seq1  GGGTCCCTGTCTGGACTCCTAGTACAAAACACACTTCCACTCACAGTCAT  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGGTCCCTGTCTGGACTCCTAGTACAAAACACACTTCCACTCACAGTCAT  250

seq1  TTTCAAATATAAGGCATCTTTCCAAATGACCTCAATACTTCACTTGAAGA  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTCAAATATAAGGCATCTTTCCAAATGACCTCAATACTTCACTTGAAGA  300

seq1  TCACTTCAGGTTGTTTGCTAACTACACAATTAAGACTTCAAGTTTTAGCA  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCACTTCAGGTTGTTTGCTAACTACACAATTAAGACTTCAAGTTTTAGCA  350

seq1  GACGAAGCACAATCATTTCATGATTTCAAGAACAAACGAACAATTTCCGC  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GACGAAGCACAATCATTTCATGATTTCAAGAACAAACGAACAATTTCCGC  400

seq1  TTTAGGAGCTCTGAAACTGAATGCATCTTAATAGCACAATGGTATATTTG  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTAGGAGCTCTGAAACTGAATGCATCTTAATAGCACAATGGTATATTTG  450

seq1  GCTTTAATTGGCAGATACTTTTCTCCCTTCCCAGTGTGGCATCAAGCAAT  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCTTTAATTGGCAGATACTTTTCTCCCTTCCCAGTGTGGCATCAAGCAAT  500

seq1  GGTGCATCTTACAAACAATGAACGGAGTGCGTATAAATAGATTTTATAAT  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGTGCATCTTACAAACAATGAACGGAGTGCGTATAAATAGATTTTATAAT  550

seq1  AGTTATATTTGGACTGGCTAAAACCTGTCTAAAAACTGTCAATGTTTTCA  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTTATATTTGGACTGGCTAAAACCTGTCTAAAAACTGTCAATGTTTTCA  600

seq1  GCTCAAGTAGAATTATCCAGGTAAAAGCTATACCATTCCGTAGAGCTCAG  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCTCAAGTAGAATTATCCAGGTAAAAGCTATACCATTCCGTAGAGCTCAG  650

seq1  CCAAGGCTTGCTGAGCAGATGATGTATGCCCGAGGTGAGGGACGAGACCA  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCAAGGCTTGCTGAGCAGATGATGTATGCCCGAGGTGAGGGACGAGACCA  700

seq1  TTTTCTCGGGGTGCCCATAACCCGGAAAGAAGGGTGACCACTAACTTGCC  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTTCTCGGGGTGCCCATAACCCGGAAAGAAGGGTGACCACTAACTTGCC  750

seq1  CACAAGCAATGGCTGCTTGCTCTGTATTAGCGAATGAGGGGAATAGATCA  800
      ||||||||||||||||||||||||||||||||||||| ||||||||||||
seq2  CACAAGCAATGGCTGCTTGCTCTGTATTAGCGAATGA-GGGAATAGATCA  799

seq1  GCTCTGCAAGTCAGCTGTTGGACCTGGTCTTTAAAGGGAAGCAACATCTA  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCTCTGCAAGTCAGCTGTTGGACCTGGTCTTTAAAGGGAAGCAACATCTA  849

seq1  GCTTAAGAGGATGAGAAGAAATGGCCAGGGATGGGATCTAACTGTACCAA  900
      ||||||||||||||||||||||||||||||||||||||| ||||||||||
seq2  GCTTAAGAGGATGAGAAGAAATGGCCAGGGATGGGATCT-ACTGTACCAA  898

seq1  AGAGGAAGGGAAAAATAAATAAATAAAAGATTTCTAAGAATTAAAACATA  950
      |||||||||||||| |||||||||||||||||||| ||||||||||||||
seq2  AGAGGAAGGGAAAATTAAATAAATAAAAGATTTCT-AGAATTAAAACATA  947

seq1  CTAC-TTGAACCTGTTATAGTATCGAAAACAAAAACTAAAAAATGCTTTT  999
      |||| |||||||||||||||||||||||||||||||| ||||||||||||
seq2  CTACTTTGAACCTGTTATAGTATCGAAAACAAAAACT-AAAAATGCTTTT  996

seq1  TTAAAGAGAAAAAAATTGAAATTATCTCCTTCTGTGAATTAATCAGTTCA  1049
      |||||||||||||| |||||||||||| |||||||||    |||||||||
seq2  TTAAAGAGAAAAAATTTGAAATTATCT-CTTCTGTGA---TATCAGTTCA  1042

seq1  TGCTTCTATAATAAAACACCTTATGCTGGATAATCTGTAAACAGTGGAAA  1099
      |||||||||||| |||||| |  |||| |||||||||| |||||||||||
seq2  TGCTTCTATAAT-AAACACTTATTGCT-GATAATCTGT-AACAGTGGAAA  1089

seq1  TG-TATCCCT-CACAGTCCTGG-ATTCTAAAAAGTCTCAAATCAAGAGAG  1146
      || ||||||| ||  ||||||| |||||   ||||||||| || ||| ||
seq2  TGTTATCCCTCCAAGGTCCTGGAATTCT---AAGTCTCAATTC-AGAAAG  1135

seq1  CCGGCAGATCTGGCTTCCAGGGAAAGGGCTGCTTCTC  1183
      | ||  || ||||||||   || ||||||||||||||
seq2  CGGGGCGAACTGGCTTC--AGGTAAGGGCTGCTTCTC  1170