BAC Information

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BAC

Clone NameB6Ng01-219G05
Chromosome16 (Build37)
Map Location 58,147,414 - 58,296,417
singlet/doubletdoublet
Overlap geneLOC100043477
Upstream geneTomm70a, Nit2, Tbc1d23, Tmem30c, 2610528E23Rik, 4631422O05Rik, Col8a1, LOC435480, LOC629342
Downstream geneDcbld2, St3gal6, LOC100043480, Gm813, E330017A01Rik, Cpox, LOC100043790, Gpr15, Cldnd1, Olfr172, Olfr173, Olfr174, Olfr178, Olfr180, Olfr1563-ps1, Olfr181, Olfr182-ps1, Olfr183, Olfr185-ps1, Olfr186, Olfr187, Olfr188-ps1, Olfr189-ps1, Olfr190, Olfr191, Olfr192, Olfr193, Olfr1540-ps1, Olfr194, Olfr195, Olfr196, Olfr197, Olfr198, Olfr199, Olfr200-ps1, Olfr201, Olfr202
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-219G05.bB6Ng01-219G05.g
ACCGA035240GA035241
length1,154296
definitionB6Ng01-219G05.b B6Ng01-219G05.g
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(58,147,414 - 58,148,597)(58,296,122 - 58,296,417)
sequence
gaattccttgctactctagtgagatttacttacatattgatcactctcat
tgaatagtgaagctgatatcttgctaataattgaaaggaagaaaagattt
gtagtaaactttatagaaggttactggctacgagcaagttgttccacata
aatgagattacactaaaatgcataaatgagtagacagtaaaaagttgaat
atgtttgaaaatagtgaacaaaacacatttagctgaaatagttgccaaaa
atagtttgtgtccaatgaaaaaaccataatatagctgaaagatttatgaa
taagatatacttgaaaatgtcataataattacttcacattagaccacgcc
taataattaacagtcaatctttaaacaactacgtcatctaggattatgta
catcaacttggtgttgtgaagttcaagtctgtgtctgagcaaagggaccc
tttagctgtcttctgtgtcagaggtgacactgtccataccactgcatttt
attctaatactttttctttcttctatgattttgttttgtttaaagaatgc
gttttgaaatgtctgtccccagcttgctgtattaaagtagtctgttgcct
ctcttctagtaattaagatcttatgacttttatttcttcttggtgtttcc
cttaaaactttaaattctttctaaaaagtaaagacttgactcacatgctt
tctcttttcctaagtgatatagaaatgatcgctggctggacagaagagca
agatgtcttccaagaaaaacaaaatgcctactccccctcacagaaaagat
tgaaacagtgaatacacacttgttctaccactggagcatccgaaggagca
ttcagggtccagtgaaggtgacaaagctactctggatccgggaaactcag
aacgcacagagaaggaaacaaatcctctgccgcactgcgcaactcttcca
ttacaaagtccttggaacagagatgtctcctgaaaggaaaagtagtgatg
caccaaacgcttctattaaactgcagagacttagatctttgctctggaga
cctgagcctccacccctggagtcaagctatgcactgtgccatggttactt
tggctctaacaggagcccatgttctgtgcttcttcgagcacgtgcccacg
tggg
actttgtagaccaggatggccttgaactcagaaatctacttgcctctgcc
taccgagtgctgggattaaaggtgcgcaccaccacgcccagctgatttgg
ttatttttttttaatattgtatagtacataaataatctagttgccgttgt
taaaagaaatctcatcagacccaagtctatagccaatttaaggcttatct
ttcttgagtaggttttgttttattctgatcctttccaaaatggggttaaa
ctttgaatgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtga
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr16_58147414_58148597
seq2: B6Ng01-219G05.b_50_1203

seq1  GAATTCCTTGCTACTCTAGTGAGATTTACTTACATATTGATCACTCTCAT  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCCTTGCTACTCTAGTGAGATTTACTTACATATTGATCACTCTCAT  50

seq1  TGAATAGTGAAGCTGATATCTTGCTAATAATTGAAAGGAAGAAAAGATTT  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGAATAGTGAAGCTGATATCTTGCTAATAATTGAAAGGAAGAAAAGATTT  100

seq1  GTAGTAAACTTTATAGAAGGTTACTGGCTACGAGCAAGTTGTTCCACATA  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTAGTAAACTTTATAGAAGGTTACTGGCTACGAGCAAGTTGTTCCACATA  150

seq1  AATGAGATTACACTAAAATGCATAAATGAGTAGACAGTAAAAAGTTGAAT  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATGAGATTACACTAAAATGCATAAATGAGTAGACAGTAAAAAGTTGAAT  200

seq1  ATGTTTGAAAATAGTGAACAAAACACATTTAGCTGAAATAGTTGCCAAAA  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGTTTGAAAATAGTGAACAAAACACATTTAGCTGAAATAGTTGCCAAAA  250

seq1  ATAGTTTGTGTCCAATGAAAAAACCATAATATAGCTGAAAGATTTATGAA  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATAGTTTGTGTCCAATGAAAAAACCATAATATAGCTGAAAGATTTATGAA  300

seq1  TAAGATATACTTGAAAATGTCATAATAATTACTTCACATTAGACCACGCC  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAAGATATACTTGAAAATGTCATAATAATTACTTCACATTAGACCACGCC  350

seq1  TAATAATTAACAGTCAATCTTTAAACAACTACGTCATCTAGGATTATGTA  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAATAATTAACAGTCAATCTTTAAACAACTACGTCATCTAGGATTATGTA  400

seq1  CATCAACTTGGTGTTGTGAAGTTCAAGTCTGTGTCTGAGCAAAGGGACCC  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATCAACTTGGTGTTGTGAAGTTCAAGTCTGTGTCTGAGCAAAGGGACCC  450

seq1  TTTAGCTGTCTTCTGTGTCAGAGGTGACACTGTCCATACCACTGCATTTT  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTAGCTGTCTTCTGTGTCAGAGGTGACACTGTCCATACCACTGCATTTT  500

seq1  ATTCTAATACTTTTTCTTTCTTCTATGATTTTGTTTTGTTTAAAGAATGC  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTCTAATACTTTTTCTTTCTTCTATGATTTTGTTTTGTTTAAAGAATGC  550

seq1  GTTTTGAAATGTCTGTCCCCAGCTTGCTGTATTAAAGTAGTCTGTTGCCT  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTTTGAAATGTCTGTCCCCAGCTTGCTGTATTAAAGTAGTCTGTTGCCT  600

seq1  CTCTTCTAGTAATTAAGATCTTATGACTTTTATTTCTTCTTGGTGTTTCC  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCTTCTAGTAATTAAGATCTTATGACTTTTATTTCTTCTTGGTGTTTCC  650

seq1  CTTAAAACTTTAAATTCTTTCTAAAAAGTAAAGACTTGACTCACATGCTT  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTAAAACTTTAAATTCTTTCTAAAAAGTAAAGACTTGACTCACATGCTT  700

seq1  TCTCTTTTCCTAAGTGATATAGAAATGATCGCTGGCTGGACAGAAGAGCA  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTCTTTTCCTAAGTGATATAGAAATGATCGCTGGCTGGACAGAAGAGCA  750

seq1  AGATGTCTTCCAAGAAAAACAAAATGCCTACTCCCCCTCACAGAAAAGAT  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGATGTCTTCCAAGAAAAACAAAATGCCTACTCCCCCTCACAGAAAAGAT  800

seq1  TGAAACAGTGAATACACACTTGTTCTACCACTGGAGCATCCGAAGGAGCA  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGAAACAGTGAATACACACTTGTTCTACCACTGGAGCATCCGAAGGAGCA  850

seq1  TTCAGGGTCCAGTGAAGGTGACAAAGCTACTCTGGATCCGGGAAACTCAG  900
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCAGGGTCCAGTGAAGGTGACAAAGCTACTCTGGATCCGGGAAACTCAG  900

seq1  AACGCACAGAGAAGGGAAACAAAATCCTCTGCCGCCACTGCGCCAACTCT  950
      ||||||||||||| |||||| ||||||||||||| ||||||| |||||||
seq2  AACGCACAGAGAA-GGAAAC-AAATCCTCTGCCG-CACTGCG-CAACTCT  946

seq1  TCCATTACAAAGTCCTTGGAACCAAGAAGGATGTCTCCTGAAAGGAAAAA  1000
      ||||||||||||||||||||||  |||  |||||||||||||||| ||||
seq2  TCCATTACAAAGTCCTTGGAAC--AGA--GATGTCTCCTGAAAGG-AAAA  991

seq1  GTAAGTGGAAGGCAACCAAACGGCCTCTATTAAAACTGCAGAGACTTAGA  1050
      || ||||  | || ||||||| || |||||| ||||||||||||||||| 
seq2  GT-AGTG--ATGC-ACCAAAC-GCTTCTATT-AAACTGCAGAGACTTAG-  1034

seq1  ATCTTTGCTCCTGGAGGACCCTGGAGCCTCACAACCCCTGAGTCAAGGCT  1100
      ||||||||| ||||| ||||   ||||||| || |||  ||||||| |||
seq2  ATCTTTGCT-CTGGA-GACC--TGAGCCTC-CACCCCTGGAGTCAA-GCT  1078

seq1  ATGCACTGTGCACATGGTTACTTT-GCTCTAAACAAGGAGCCCATGTCCT  1149
      ||||||||||| |||||||||||| |||||||   |||||||||||| ||
seq2  ATGCACTGTGC-CATGGTTACTTTGGCTCTAA--CAGGAGCCCATGTTCT  1125

seq1  GTCGCTTCTCTCGAAAGCCACGTGCCCACTGTGGG  1184
      || |||||| ||||    ||||||||||| |||||
seq2  GT-GCTTCT-TCGA---GCACGTGCCCAC-GTGGG  1154

seq1: chr16_58296122_58296417
seq2: B6Ng01-219G05.g_73_368 (reverse)

seq1  TCACACACACACACACACACACACACACACACACACACATTCAAAGTTTA  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCACACACACACACACACACACACACACACACACACACATTCAAAGTTTA  50

seq1  ACCCCATTTTGGAAAGGATCAGAATAAAACAAAACCTACTCAAGAAAGAT  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACCCCATTTTGGAAAGGATCAGAATAAAACAAAACCTACTCAAGAAAGAT  100

seq1  AAGCCTTAAATTGGCTATAGACTTGGGTCTGATGAGATTTCTTTTAACAA  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGCCTTAAATTGGCTATAGACTTGGGTCTGATGAGATTTCTTTTAACAA  150

seq1  CGGCAACTAGATTATTTATGTACTATACAATATTAAAAAAAAATAACCAA  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CGGCAACTAGATTATTTATGTACTATACAATATTAAAAAAAAATAACCAA  200

seq1  ATCAGCTGGGCGTGGTGGTGCGCACCTTTAATCCCAGCACTCGGTAGGCA  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATCAGCTGGGCGTGGTGGTGCGCACCTTTAATCCCAGCACTCGGTAGGCA  250

seq1  GAGGCAAGTAGATTTCTGAGTTCAAGGCCATCCTGGTCTACAAAGT  296
      ||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGGCAAGTAGATTTCTGAGTTCAAGGCCATCCTGGTCTACAAAGT  296