BAC Information

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BAC

Clone NameB6Ng01-219K19
Chromosome16 (Build37)
Map Location 57,245,070 - 57,373,638
singlet/doubletdoublet
Overlap geneTmem30c, 2610528E23Rik, 4631422O05Rik
Upstream geneImpg2, LOC672835, Abi3bp, Tfg, Gpr128, Tmem45a, LOC668026, LOC668036, 2310005G13Rik, Tomm70a, Nit2, Tbc1d23
Downstream geneCol8a1, LOC435480, LOC629342, LOC100043477
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-219K19.bB6Ng01-219K19.g
ACCGA035442GA035443
length1,060384
definitionB6Ng01-219K19.b B6Ng01-219K19.g
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(57,372,565 - 57,373,638)(57,245,070 - 57,245,459)
sequence
gaattccagggaatgtgcataccccaagagagtaatgtacaaaacataat
taagattttcattttaatgtttattttataaaataaaataatttaatgtt
tcagtagattagaatttgccttctaataagatgggaagcatgaatgttga
tagattctcaggcacttaaaaaataagatccagatagaaattaaggactg
aaaatgattttgcagacatcttttatgtccacttcttcaaaacattggca
tgctgatgttcatcccctagtttgaaggtcacagagaggaaattacatgt
aaagatatgttaatcctttaggacaatgcctaagatacagtaagcactga
gcaaaacaatatgttattagtagttattgtagctctgcaatgcaaacata
attatacacacattttgagttcctatcttgtccttactacctctctgcat
ttcctttccttcagaatctgtataggatcaggaaaatatgttcgatctat
agaaaacccaatggtttcatcatgggacagaagaactccagagataactg
ctgagactgtcctcttcttacacacccttgtttattgatgctttactcat
catagcaaggaactagaaccaacagaggcgcccatcaacagataaattag
catatacaaagcagaataccatctttcggctataaagaaaaatgaaatgt
gggaaggtgggtggatatggaaaagataatgttaaatgaaatgacccagg
ctcagaaagaaacaatgacatgttcttcttcgtatatggactttaacttt
caacggatacatgaaaataggtatgtgcatgtgtatagtataatgtggca
ttagaacgggagtgagaccaagaaaggatgctaggtggtaaggaacaaca
gaatgtagagaaggagtcagaaagggggtacaaactttgtttcccaatct
cagtgtattatgggttttccccagatggacgagttcaccttctgttattg
aatcactaaacattaaataaaccaataaagtactttcaaaaaatcatatt
tctagagtct
agtcctgctcaaccaaatcaaagcatccctaagatggcactttcttcatt
ggccaaagccatccaagtcaccagtcccactttccttctgtccccgaaca
cggatggacagagcagctaacgacctagcaacaggatcaaacatacaaga
agtgatttgggggtatagctgtgagatctgaaaagagatttaagcatttc
cacattactgattcattctaagagtcggagaggaaaattctgactttcag
acctttgagttgcatgaagtttcggggttgagatgtcatggggtggggta
tgaagtgtgttagggttatcatgggctcaaagcgctcatgttcgctcaca
ggtgagaggctgagccacctaaagcctacttaca
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr16_57372565_57373638
seq2: B6Ng01-219K19.b_48_1107 (reverse)

seq1  AGACTTCTAGGAAATTATGATTTTTTTAAAGTTACTCTATTTGTTTATTT  50
      |||| |||||  || ||||||||||| |||| |||| |||| ||||||||
seq2  AGAC-TCTAG--AAATATGATTTTTTGAAAG-TACTTTATTGGTTTATTT  46

seq1  AATGGTTTAGTGATTTCAATAACAGAAGGTTGAACTCGTCCATCTTGGGG  100
      ||| ||||||||| ||||||||||||||| |||||||||||||||   ||
seq2  AAT-GTTTAGTGA-TTCAATAACAGAAGG-TGAACTCGTCCATCT---GG  90

seq1  GAAAAACCCATAATACAACTGAGATTGGGAAACAAAAGTTTTGTACCCCC  150
      | |||||||||||||| |||||||||||||||||||   |||||||||||
seq2  GGAAAACCCATAATAC-ACTGAGATTGGGAAACAAA--GTTTGTACCCCC  137

seq1  TTTCTGACTCCTTTCTCTACATTCTGTTGTTCCTTACCACCTAGCATCCT  200
      ||||||||||| ||||||||||||||||||||||||||||||||||||||
seq2  TTTCTGACTCC-TTCTCTACATTCTGTTGTTCCTTACCACCTAGCATCCT  186

seq1  TTCTTGGTCTCACTCCCGTTCTAATGCCACATTATACTATACACATGCAC  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCTTGGTCTCACTCCCGTTCTAATGCCACATTATACTATACACATGCAC  236

seq1  ATACCTATTTTCATGTATCCGTTGAAAGTTAAAGTCCATATACGAAGAAG  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATACCTATTTTCATGTATCCGTTGAAAGTTAAAGTCCATATACGAAGAAG  286

seq1  AACATGTCATTGTTTCTTTCTGAGCCTGGGTCATTTCATTTAACATTATC  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACATGTCATTGTTTCTTTCTGAGCCTGGGTCATTTCATTTAACATTATC  336

seq1  TTTTCCATATCCACCCACCTTCCCACATTTCATTTTTCTTTATAGCCGAA  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTTCCATATCCACCCACCTTCCCACATTTCATTTTTCTTTATAGCCGAA  386

seq1  AGATGGTATTCTGCTTTGTATATGCTAATTTATCTGTTGATGGGCGCCTC  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGATGGTATTCTGCTTTGTATATGCTAATTTATCTGTTGATGGGCGCCTC  436

seq1  TGTTGGTTCTAGTTCCTTGCTATGATGAGTAAAGCATCAATAAACAAGGG  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTTGGTTCTAGTTCCTTGCTATGATGAGTAAAGCATCAATAAACAAGGG  486

seq1  TGTGTAAGAAGAGGACAGTCTCAGCAGTTATCTCTGGAGTTCTTCTGTCC  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTGTAAGAAGAGGACAGTCTCAGCAGTTATCTCTGGAGTTCTTCTGTCC  536

seq1  CATGATGAAACCATTGGGTTTTCTATAGATCGAACATATTTTCCTGATCC  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATGATGAAACCATTGGGTTTTCTATAGATCGAACATATTTTCCTGATCC  586

seq1  TATACAGATTCTGAAGGAAAGGAAATGCAGAGAGGTAGTAAGGACAAGAT  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATACAGATTCTGAAGGAAAGGAAATGCAGAGAGGTAGTAAGGACAAGAT  636

seq1  AGGAACTCAAAATGTGTGTATAATTATGTTTGCATTGCAGAGCTACAATA  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGAACTCAAAATGTGTGTATAATTATGTTTGCATTGCAGAGCTACAATA  686

seq1  ACTACTAATAACATATTGTTTTGCTCAGTGCTTACTGTATCTTAGGCATT  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTACTAATAACATATTGTTTTGCTCAGTGCTTACTGTATCTTAGGCATT  736

seq1  GTCCTAAAGGATTAACATATCTTTACATGTAATTTCCTCTCTGTGACCTT  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTCCTAAAGGATTAACATATCTTTACATGTAATTTCCTCTCTGTGACCTT  786

seq1  CAAACTAGGGGATGAACATCAGCATGCCAATGTTTTGAAGAAGTGGACAT  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAAACTAGGGGATGAACATCAGCATGCCAATGTTTTGAAGAAGTGGACAT  836

seq1  AAAAGATGTCTGCAAAATCATTTTCAGTCCTTAATTTCTATCTGGATCTT  900
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAAGATGTCTGCAAAATCATTTTCAGTCCTTAATTTCTATCTGGATCTT  886

seq1  ATTTTTTAAGTGCCTGAGAATCTATCAACATTCATGCTTCCCATCTTATT  950
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTTTTTAAGTGCCTGAGAATCTATCAACATTCATGCTTCCCATCTTATT  936

seq1  AGAAGGCAAATTCTAATCTACTGAAACATTAAATTATTTTATTTTATAAA  1000
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAAGGCAAATTCTAATCTACTGAAACATTAAATTATTTTATTTTATAAA  986

seq1  ATAAACATTAAAATGAAAATCTTAATTATGTTTTGTACATTACTCTCTTG  1050
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATAAACATTAAAATGAAAATCTTAATTATGTTTTGTACATTACTCTCTTG  1036

seq1  GGGTATGCACATTCCCTGGAATTC  1074
      ||||||||||||||||||||||||
seq2  GGGTATGCACATTCCCTGGAATTC  1060

seq1: chr16_57245070_57245459
seq2: B6Ng01-219K19.g_68_457

seq1  GAATTCAGTCCTGCTCAACCAAATCAAAGCATCCCTAAGATGGCACTTTC  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCAGTCCTGCTCAACCAAATCAAAGCATCCCTAAGATGGCACTTTC  50

seq1  TTCATTGGCCAAAGCCATCCAAGTCACCAGTCCCACTTTCCTTCTGTCCC  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCATTGGCCAAAGCCATCCAAGTCACCAGTCCCACTTTCCTTCTGTCCC  100

seq1  CGAACACGGATGGACAGAGCAGCTAACGACCTAGCAACAGGATCAAACAT  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CGAACACGGATGGACAGAGCAGCTAACGACCTAGCAACAGGATCAAACAT  150

seq1  ACAAGAAGTGATTTGGGGGTATAGCTGTGAGATCTGAAAAGAGATTTAAG  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACAAGAAGTGATTTGGGGGTATAGCTGTGAGATCTGAAAAGAGATTTAAG  200

seq1  CATTTCCACATTACTGATTCATTCTAAGAGTCGGAGAGGAAAATTCTGAC  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATTTCCACATTACTGATTCATTCTAAGAGTCGGAGAGGAAAATTCTGAC  250

seq1  TTTCAGACCTTTGAGTTGCATGAAGTTTCGGGGTTGAGATGTCATGGGGT  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTCAGACCTTTGAGTTGCATGAAGTTTCGGGGTTGAGATGTCATGGGGT  300

seq1  GGGGTATGAAGTGTGTTAGGGTTATCATGGGCTCAAAGCGCTCATGTTCG  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGGGTATGAAGTGTGTTAGGGTTATCATGGGCTCAAAGCGCTCATGTTCG  350

seq1  CTCACAGGTGAGAGGCTGAGCCACCTAAAGCCTACTTACA  390
      ||||||||||||||||||||||||||||||||||||||||
seq2  CTCACAGGTGAGAGGCTGAGCCACCTAAAGCCTACTTACA  390