BAC Information

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BAC

Clone NameB6Ng01-219N19
Chromosome16 (Build37)
Map Location 58,575,473 - 58,576,266
singlet/doubletsinglet
Overlap genenone
Upstream gene2610528E23Rik, Col8a1, LOC435480, LOC629342, LOC100043477, Dcbld2, St3gal6, LOC100043480
Downstream geneGm813, E330017A01Rik, Cpox, LOC100043790, Gpr15, Cldnd1, Olfr172, Olfr173, Olfr174, Olfr178, Olfr180, Olfr1563-ps1, Olfr181, Olfr182-ps1, Olfr183, Olfr185-ps1, Olfr186, Olfr187, Olfr188-ps1, Olfr189-ps1, Olfr190, Olfr191, Olfr192, Olfr193, Olfr1540-ps1, Olfr194, Olfr195, Olfr196, Olfr197, Olfr198, Olfr199, Olfr200-ps1, Olfr201, Olfr202, Olfr203, Olfr204, Olfr205, GA_x5J8B7U0478-6-340, Olfr206, Olfr207, Gabrr3, LOC100043803, Mina, BC043118, LOC672884
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-219N19.bB6Ng01-219N19.g
ACCGA035576GA035577
length870999
definitionB6Ng01-219N19.b B6Ng01-219N19.g
singlet/doublet---singlet
BLAST hitno hit dataunique
sequence
gaattctttgtttacctctgtaccccatttttaatggggttatttgaatt
tctggagtccagcttctggagctctttgtatatattggatattagttccc
tttcagatttaggattggtaaaaatcctttcccaatctgttggtggcctt
tttgttttattgacagtgtcttttgccttacagaagctttgcaattctat
gaggtcccatttgtcaattcttgatcttacagcagaagccattgctgttc
tgtttaggaatatttttccctgtgcccatatcttcaaggcttttccccac
attctcctctattattttcagtgtctctggttttatgtggaggtgtttga
tctacttagatttgagctttgtacaaggagataagaatggatcaattagc
attcttctacatgataaccgccagttgtgccagcaccatttgttgaaaat
gctatcttttttccactgaatggttttagctcccttgtcaaagatcaaag
atcaagtgaccataggtgtgtggattcatttctgggtcttaaattctatt
ccattgatctacctgtccgtcattgtaccagtaccatgcagtttttatca
caattgctctggtgtacagcttaatgtcaggcatggtgattcccccagag
gttcttttattgttgagaatagtttttgctatcctaggttttttattatt
tcagatgaatttgcaaattgccctttctatctcagtgaagaattgagttg
gaattttgatggggattacattgaatctgtagattgctttcggcaggata
gccatttttactatattattcctgccagtccatgagcatgggagatcttt
ttatcttctgagatcctctt
gaattccatgtgtcctatcagatcaccatggactaacgctggtcttcaat
aacaacaaaaataatggaaactgaacaacgctctacttaataataatttg
atcaaggaagaaatttatttaatatatcatcacctataagatgtgctttg
taaaatttcaacttggaaggacttcctttttaatcacgtaaagttttggc
aactcattttattaaagattttgcaactgaaactgaaagtagtggagggt
ccataaatttaaatgaacttcagagaccacataaagaaagaaattaaaga
ctttttagaatttagtgaaaatgaagacacatcataccaaaacttatggg
gcacaatgaaagcagtggtaagaggaaaactcacagctctaagtgccttc
aaaaagaaactggagaacgcttacactagtagctaaacagcacacctgaa
agctctagaacacaaagaagcaaatatacccaagaggagtagatggcaga
gaataatcaatctcaagactgaaatccaagtagaatcaaaatagtagttt
tacaaaaaaaaaaaaaaaatcaacaaaaccaggagctgtctctttgagaa
aaatcaagatagataaacctttagccagactaacctgagggcacagaagc
agtatccaaattaataaatcagaaatgaaaagggagacatagtaatgaaa
tatatcttaaaataattattctgtctgttgaatattaacagttgaataat
ctggtaatctttttaagtaaactgattgttagacaatgtacactgatata
taatgcattttaaatattcactcactatgtcaggtgatatcatataaggg
cttttgaatatatttcttgttttgttttgttttgggttttggtttttcag
agacagggttttctctgtatcaccctggctgtctgaactcactctgtaga
ccaggctggactcaacctcaaaaaatctacctgacctcttgctttccaa
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr16_58575473_58576266
seq2: B6Ng01-219N19.g_274_1068 (reverse)

seq1  TTGGGAAGC-AGAGG-CAGGTAGA-TTTCTGAGTTTGAGGCCAGCCTGGT  47
      |||| |||| ||||| |||||||| ||| |||| ||||| ||||||||||
seq2  TTGGAAAGCAAGAGGTCAGGTAGATTTTTTGAGGTTGAGTCCAGCCTGGT  50

seq1  CTACAGAGTGAGTTTCAGGACAGCCAGGGTGATACAGAG-AAACCCTGTC  96
      |||||||||||| |||| ||||||||||||||||||||| ||||||||||
seq2  CTACAGAGTGAG-TTCA-GACAGCCAGGGTGATACAGAGAAAACCCTGTC  98

seq1  TTCTTGAAAAACCAAAA-CCAAAACAAAACAAAACAAGAAATATATTCAA  145
      |   ||||||||||||| ||||||||||||||||||||||||||||||||
seq2  T--CTGAAAAACCAAAACCCAAAACAAAACAAAACAAGAAATATATTCAA  146

seq1  AAGCCCTTATATGATATCACCTGACATAGTGAGTGAATATTTAAAATGCA  195
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGCCCTTATATGATATCACCTGACATAGTGAGTGAATATTTAAAATGCA  196

seq1  TTATATATCAGTGTACATTGTCTAACAATCAGTTTACTTAAAAAGATTAC  245
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTATATATCAGTGTACATTGTCTAACAATCAGTTTACTTAAAAAGATTAC  246

seq1  CAGATTATTCAACTGTTAATATTCAACAGACAGAATAATTATTTTAAGAT  295
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGATTATTCAACTGTTAATATTCAACAGACAGAATAATTATTTTAAGAT  296

seq1  ATATTTCATTACTATGTCTCCCTTTTCATTTCTGATTTATTAATTTGGAT  345
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATATTTCATTACTATGTCTCCCTTTTCATTTCTGATTTATTAATTTGGAT  346

seq1  ACTGCTTCTGTGCCCTCAGGTTAGTCTGGCTAAAGGTTTATCTATCTTGA  395
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTGCTTCTGTGCCCTCAGGTTAGTCTGGCTAAAGGTTTATCTATCTTGA  396

seq1  TTTTTCTCAAAGAGACAGCTCCTGGTTTTGTTGATTTTTTTTTTTTTTTT  445
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTTTCTCAAAGAGACAGCTCCTGGTTTTGTTGATTTTTTTTTTTTTTTT  446

seq1  GTAAAACTACTATTTTGATTCTACTTGGATTTCAGTCTTGAGATTGATTA  495
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTAAAACTACTATTTTGATTCTACTTGGATTTCAGTCTTGAGATTGATTA  496

seq1  TTCTCTGCCATCTACTCCTCTTGGGTATATTTGCTTCTTTGTGTTCTAGA  545
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCTCTGCCATCTACTCCTCTTGGGTATATTTGCTTCTTTGTGTTCTAGA  546

seq1  GCTTTCAGGTGTGCTGTTTAGCTACTAGTGTAAGCGTTCTCCAGTTTCTT  595
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCTTTCAGGTGTGCTGTTTAGCTACTAGTGTAAGCGTTCTCCAGTTTCTT  596

seq1  TTTGAAGGCACTTAGAGCTGTGAGTTTTCCTCTTACCACTGCTTTCATTG  645
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTGAAGGCACTTAGAGCTGTGAGTTTTCCTCTTACCACTGCTTTCATTG  646

seq1  TGCCCCATAAGTTTTGGTATGATGTGTCTTCATTTTCACTAAATTCTAAA  695
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGCCCCATAAGTTTTGGTATGATGTGTCTTCATTTTCACTAAATTCTAAA  696

seq1  AAGTCTTTAATTTCTTTCTTTATGTGGTCTCTGAAGTTCATTTAAATTTA  745
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGTCTTTAATTTCTTTCTTTATGTGGTCTCTGAAGTTCATTTAAATTTA  746

seq1  TGGACCCTCCACTACTTTCAGTTTCAGTTGCAAAATCTTTAATAAAATG  794
      |||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGACCCTCCACTACTTTCAGTTTCAGTTGCAAAATCTTTAATAAAATG  795