BAC Information

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BAC

Clone NameB6Ng01-223L22
Chromosome16 (Build37)
Map Location 6,942,710 - 7,067,492
singlet/doubletdoublet
Overlap geneA2bp1
Upstream geneLOC100042445
Downstream genenone
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-223L22.bB6Ng01-223L22.g
ACCGA038399GA038400
length691686
definitionB6Ng01-223L22.b B6Ng01-223L22.g
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(6,942,710 - 6,943,400)(7,066,807 - 7,067,492)
sequence
gaattcttcctctgtattaagaatacaagcatgtaccatcaagtccttgg
ttttgtttttgtttatgtttttgtttttatataggttctaggaatttaac
tcgggaccgtatgttgcttgattgactcaccgccagcacccacccgcagc
tactctttgtgtattcttaaatatcttctaggaaaagaacccattaagtg
cttcgtcctgacccagcagattcttgccaggcctctgtttacagggtgca
tacagcacagtgcagtagagtatgagatcgtgtgatgtacagtgcagaag
gtatcacttcttgcgtggagctcatatgctctggtcaagaaaaatcccct
gggaaggagttctagcagaaccttccagctgcctacccggtagccattgt
tttttgtttcttcttaagatcttctttgataaagggccagttagtcatag
gcaatatggccaaattaaaaagacaggaattctaggttcctagctttccc
accaaagagggaggtccaaaaaggcagccattgaaatgactttatgagtc
ttctggaaatccctataatgatgtggagtcttttacacacatatttctgt
gtctacacttactttgtcaaccttaggaaattaggaacctttacagtcat
gcatttaggtgttgtgggagaggaaagggaaggaggaagaa

gaattcaattatttaaggctggaggtttggccatcttgacaaggtttctc
tgtaattgattcacatgcattggactggccatgttgtgcaatcccgaaag
cccctcgaacagctgcacactgacccatcttatacgagcacccgatacca
tttctaactttagcttctgactatgactttcaaaaccatatttctgagaa
gttagcaggaaggacagacacatcaccacgagaccggtgtgttttctagt
ttgcttcctgttgacattcatgacatagagacactcctcagtgctgaggg
aaggtcctgggctgcattttgtctctctgatgttataaagtgcaaaagct
gtggtgtcagaaggcaggacacacaacttacttcttgagggtataaactg
acatatttacatcttgattacacaggtgtagaagagtctgagggcaaact
tctaaaggggctttggaaattgggggattgtataaatgtgacaggcagat
cagcaaaattggggctggagagatggctcagcagttcagagcacttgttc
tctctctctgtctctgtctctgtctctgtctctgtctctctgtctctctg
tctctctgtctctctgtctctctgtctgtctctgtctgtctgtctgtctg
tctgtctgtctgtctctctctctctgtgtgtgtgtg
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr16_6942710_6943400
seq2: B6Ng01-223L22.b_46_736

seq1  GAATTCTTCCTCTGTATTAAGAATACAAGCATGTACCATCAAGTCCTTGG  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCTTCCTCTGTATTAAGAATACAAGCATGTACCATCAAGTCCTTGG  50

seq1  TTTTGTTTTTGTTTATGTTTTTGTTTTTATATAGGTTCTAGGAATTTAAC  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTTGTTTTTGTTTATGTTTTTGTTTTTATATAGGTTCTAGGAATTTAAC  100

seq1  TCGGGACCGTATGTTGCTTGATTGACTCACCGCCAGCACCCACCCGCAGC  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCGGGACCGTATGTTGCTTGATTGACTCACCGCCAGCACCCACCCGCAGC  150

seq1  TACTCTTTGTGTATTCTTAAATATCTTCTAGGAAAAGAACCCATTAAGTG  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TACTCTTTGTGTATTCTTAAATATCTTCTAGGAAAAGAACCCATTAAGTG  200

seq1  CTTCGTCCTGACCCAGCAGATTCTTGCCAGGCCTCTGTTTACAGGGTGCA  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTCGTCCTGACCCAGCAGATTCTTGCCAGGCCTCTGTTTACAGGGTGCA  250

seq1  TACAGCACAGTGCAGTAGAGTATGAGATCGTGTGATGTACAGTGCAGAAG  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TACAGCACAGTGCAGTAGAGTATGAGATCGTGTGATGTACAGTGCAGAAG  300

seq1  GTATCACTTCTTGCGTGGAGCTCATATGCTCTGGTCAAGAAAAATCCCCT  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTATCACTTCTTGCGTGGAGCTCATATGCTCTGGTCAAGAAAAATCCCCT  350

seq1  GGGAAGGAGTTCTAGCAGAACCTTCCAGCTGCCTACCCGGTAGCCATTGT  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGGAAGGAGTTCTAGCAGAACCTTCCAGCTGCCTACCCGGTAGCCATTGT  400

seq1  TTTTTGTTTCTTCTTAAGATCTTCTTTGATAAAGGGCCAGTTAGTCATAG  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTTTGTTTCTTCTTAAGATCTTCTTTGATAAAGGGCCAGTTAGTCATAG  450

seq1  GCAATATGGCCAAATTAAAAAGACAGGAATTCTAGGTTCCTAGCTTTCCC  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCAATATGGCCAAATTAAAAAGACAGGAATTCTAGGTTCCTAGCTTTCCC  500

seq1  ACCAAAGAGGGAGGTCCAAAAAGGCAGCCATTGAAATGACTTTATGAGTC  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACCAAAGAGGGAGGTCCAAAAAGGCAGCCATTGAAATGACTTTATGAGTC  550

seq1  TTCTGGAAATCCCTATAATGATGTGGAGTCTTTTACACACATATTTCTGT  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCTGGAAATCCCTATAATGATGTGGAGTCTTTTACACACATATTTCTGT  600

seq1  GTCTACACTTACTTTGTCAACCTTAGGAAATTAGGAACCTTTACAGTCAT  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTCTACACTTACTTTGTCAACCTTAGGAAATTAGGAACCTTTACAGTCAT  650

seq1  GCATTTAGGTGTTGTGGGAGAGGAAAGGGAAGGAGGAAGAA  691
      |||||||||||||||||||||||||||||||||||||||||
seq2  GCATTTAGGTGTTGTGGGAGAGGAAAGGGAAGGAGGAAGAA  691


seq1: chr16_7066807_7067492
seq2: B6Ng01-223L22.g_69_754 (reverse)

seq1  CACACACACACAGAGAGAGAGAGACAGACAGACAGACAGACAGACAGACA  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACACACACACAGAGAGAGAGAGACAGACAGACAGACAGACAGACAGACA  50

seq1  GACAGAGACAGACAGAGAGACAGAGAGACAGAGAGACAGAGAGACAGAGA  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GACAGAGACAGACAGAGAGACAGAGAGACAGAGAGACAGAGAGACAGAGA  100

seq1  GACAGAGACAGAGACAGAGACAGAGACAGAGAGAGAGAACAAGTGCTCTG  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GACAGAGACAGAGACAGAGACAGAGACAGAGAGAGAGAACAAGTGCTCTG  150

seq1  AACTGCTGAGCCATCTCTCCAGCCCCAATTTTGCTGATCTGCCTGTCACA  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACTGCTGAGCCATCTCTCCAGCCCCAATTTTGCTGATCTGCCTGTCACA  200

seq1  TTTATACAATCCCCCAATTTCCAAAGCCCCTTTAGAAGTTTGCCCTCAGA  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTATACAATCCCCCAATTTCCAAAGCCCCTTTAGAAGTTTGCCCTCAGA  250

seq1  CTCTTCTACACCTGTGTAATCAAGATGTAAATATGTCAGTTTATACCCTC  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCTTCTACACCTGTGTAATCAAGATGTAAATATGTCAGTTTATACCCTC  300

seq1  AAGAAGTAAGTTGTGTGTCCTGCCTTCTGACACCACAGCTTTTGCACTTT  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGAAGTAAGTTGTGTGTCCTGCCTTCTGACACCACAGCTTTTGCACTTT  350

seq1  ATAACATCAGAGAGACAAAATGCAGCCCAGGACCTTCCCTCAGCACTGAG  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATAACATCAGAGAGACAAAATGCAGCCCAGGACCTTCCCTCAGCACTGAG  400

seq1  GAGTGTCTCTATGTCATGAATGTCAACAGGAAGCAAACTAGAAAACACAC  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGTGTCTCTATGTCATGAATGTCAACAGGAAGCAAACTAGAAAACACAC  450

seq1  CGGTCTCGTGGTGATGTGTCTGTCCTTCCTGCTAACTTCTCAGAAATATG  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CGGTCTCGTGGTGATGTGTCTGTCCTTCCTGCTAACTTCTCAGAAATATG  500

seq1  GTTTTGAAAGTCATAGTCAGAAGCTAAAGTTAGAAATGGTATCGGGTGCT  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTTTGAAAGTCATAGTCAGAAGCTAAAGTTAGAAATGGTATCGGGTGCT  550

seq1  CGTATAAGATGGGTCAGTGTGCAGCTGTTCGAGGGGCTTTCGGGATTGCA  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CGTATAAGATGGGTCAGTGTGCAGCTGTTCGAGGGGCTTTCGGGATTGCA  600

seq1  CAACATGGCCAGTCCAATGCATGTGAATCAATTACAGAGAAACCTTGTCA  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAACATGGCCAGTCCAATGCATGTGAATCAATTACAGAGAAACCTTGTCA  650

seq1  AGATGGCCAAACCTCCAGCCTTAAATAATTGAATTC  686
      ||||||||||||||||||||||||||||||||||||
seq2  AGATGGCCAAACCTCCAGCCTTAAATAATTGAATTC  686


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