BAC Information

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BAC

Clone NameB6Ng01-224B02
Chromosome16 (Build37)
Map Location 83,583,761 - 83,709,481
singlet/doubletdoublet
Overlap genenone
Upstream geneEG545172, LOC100039572
Downstream geneEG621729, LOC640489, LOC665664, LOC547311, LOC100039893, LOC100039634
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-224B02.bB6Ng01-224B02.g
ACCGA038635GA038636
length1,1351,157
definitionB6Ng01-224B02.b B6Ng01-224B02.g
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(83,583,761 - 83,584,909)(83,708,308 - 83,709,481)
sequence
gaattcacatgaaacaattttatactttcctaatattaataatatataac
tgcacaccctccataaaatattattcttatcaggtataaatatagaaggt
cactaaaatagttcttattagtgcaaagtactgtatgtattggtgatcta
gcaatgaaattaccatcaaggctttattgctaaagtcatttgaaagtaaa
atattttattacagctagtctttcagtctcacaactctgaattcacacac
atcttaacatttccacttgaaaagccatcatgctagatgcattgctttca
aatattagcacttccttctgtcctcttccatgccctacctcttacgaact
gacagttctaactatgaagccactttaagtagagaaccttaacccaattc
ttattatcacacattatcattgatctcttttcaaattttgttttgcttac
cttcaagaatatcctgaatttggccttccttttgtttaatgattgaaacc
taaaaaaaaccattttgcataaatcactgaaatattctctaaattgcttc
tttgggttctggattcccaaatgttaagcggttacccagcaactagcccg
aataaccctttccaaggagtagccacaccagatttcttctctgctcaaat
ctctggtatctccatagcctcatgaataaatggcagctatattctgcata
aaggcctggagagtgtgtgggttctagtatgcttatacctctgtatcctt
ttatctcctgaaacaagccttgtcttagatttgcatgtgaggactcgatt
caattatctggaacagtgaaaaccaattttcaagcctaatctttttaaga
tttaaatcatccaatctgatttgaagtacagaagattaaatctgagaaga
ctgggtatatttccaccttaagaaccagctataccatttcctgggtatat
actcaaagatgctccaacatcctacagatattttgttcaaatatgttcct
agccattttattcctaacatccagacctgaaacaggctagattctctcaa
ctgaagaaatgataagagaacatgcacgttttacatgaaatactacttgc
tattaaaacagacatcatgatcttgtatgcaaatg

gaattctttccaagcaagtgtttattcatgtgtgaagcattttcaaatca
ctctacctttctttgcttaccctttgattagagaaaaataaagctttatt
gtctcaagataatgtctatattctatttttatacttccaattgttttcta
acttactcatatggacaaggaaacttgcagtgagttaaatttgtgattgt
atcttctcaatgactgtctcaacttgattctaaaattccattttttaaat
acaccaataatagaactgagatttttaacttagatctttccctactttaa
gtccagtgaatccacaatcaagtctcttaaacttgtatttttaaaattgc
tgtcaattatatatggtaatttctataacctaagataatttgattgtttt
acaactacacttaagagaacatttgttatttatgcttttaaatacttgat
ctcattagtgtatcacattactatattattataaccttaatacttatttc
ataatcagtccattactctatatgaaatgaagttttatctacataatttg
acacatgggcacatttgtatttagtctatgcattactttcagcttattct
accttaatacagagtgagctattgaacaataaaataaaaataatataatg
acttccatgttttctaaattaaattaatttatatgagttttaactctagg
aaaatggcagaaacacaatgggtaagttgacttacatttctagatggctt
atataatggagagatctccgttcaggaatggtgtgacactcttgtttgtt
tgtttgtttgtttgtttctgaacctacatttataggattcaacctcccct
ctagcaccccacccagcatcaatagtggaaaagaaaaggttattaggata
tgcaggaagtggacatgtttagaaatagttctttggggtgattccaatct
tcattgtccttagtccagtccattagcaacacaaacctgaacaggcagct
gcagttagtcacttgcagaataccacacaattcagcaaggcatttcatac
agaagaaactttcaggctcacctaccagcagagtcagtgaaacggaaaga
agccatgtctcgtgagaatacgtggtaattccctctatgacctcaccaag
aagctca
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr16_83583761_83584909
seq2: B6Ng01-224B02.b_47_1181

seq1  GAATTCACATGAAACAATTTTATACTTTCCTAATATTAATAATATATAAC  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCACATGAAACAATTTTATACTTTCCTAATATTAATAATATATAAC  50

seq1  TGCACACCCTCCATAAAATATTATTCTTATCAGGTATAAATATAGAAGGT  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGCACACCCTCCATAAAATATTATTCTTATCAGGTATAAATATAGAAGGT  100

seq1  CACTAAAATAGTTCTTATTAGTGCAAAGTACTGTATGTATTGGTGATCTA  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACTAAAATAGTTCTTATTAGTGCAAAGTACTGTATGTATTGGTGATCTA  150

seq1  GCAATGAAATTACCATCAAGGCTTTATTGCTAAAGTCATTTGAAAGTAAA  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCAATGAAATTACCATCAAGGCTTTATTGCTAAAGTCATTTGAAAGTAAA  200

seq1  ATATTTTATTACAGCTAGTCTTTCAGTCTCACAACTCTGAATTCACACAC  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATATTTTATTACAGCTAGTCTTTCAGTCTCACAACTCTGAATTCACACAC  250

seq1  ATCTTAACATTTCCACTTGAAAAGCCATCATGCTAGATGCATTGCTTTCA  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATCTTAACATTTCCACTTGAAAAGCCATCATGCTAGATGCATTGCTTTCA  300

seq1  AATATTAGCACTTCCTTCTGTCCTCTTCCATGCCCTACCTCTTACGAACT  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATATTAGCACTTCCTTCTGTCCTCTTCCATGCCCTACCTCTTACGAACT  350

seq1  GACAGTTCTAACTATGAAGCCACTTTAAGTAGAGAACCTTAACCCAATTC  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GACAGTTCTAACTATGAAGCCACTTTAAGTAGAGAACCTTAACCCAATTC  400

seq1  TTATTATCACACATTATCATTGATCTCTTTTCAAATTTTGTTTTGCTTAC  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTATTATCACACATTATCATTGATCTCTTTTCAAATTTTGTTTTGCTTAC  450

seq1  CTTCAAGAATATCCTGAATTTGGCCTTCCTTTTGTTTAATGATTGAAACC  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTCAAGAATATCCTGAATTTGGCCTTCCTTTTGTTTAATGATTGAAACC  500

seq1  TAAAAAAAACCATTTTGCATAAATCACTGAAATATTCTCTAAATTGCTTC  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAAAAAAAACCATTTTGCATAAATCACTGAAATATTCTCTAAATTGCTTC  550

seq1  TTTGGGTTCTGGATTCCCAAATGTTAAGCGGTTACCCAGCAACTAGCCCG  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTGGGTTCTGGATTCCCAAATGTTAAGCGGTTACCCAGCAACTAGCCCG  600

seq1  AATAACCCTTTCCAAGGAGTAGCCACACCAGATTTCTTCTCTGCTCAAAT  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATAACCCTTTCCAAGGAGTAGCCACACCAGATTTCTTCTCTGCTCAAAT  650

seq1  CTCTGGTATCTCCATAGCCTCATGAATAAATGGCAGCTATATTCTGCATA  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCTGGTATCTCCATAGCCTCATGAATAAATGGCAGCTATATTCTGCATA  700

seq1  AAGGCCTGGAGAGTGTGTGGGTTCTAGTATGCTTATACCTCTGTATCCTT  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGGCCTGGAGAGTGTGTGGGTTCTAGTATGCTTATACCTCTGTATCCTT  750

seq1  TTATCTCCTGAAACAAGCCTTGTCTTAGATTTGCATGTGAGGACTCGATT  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTATCTCCTGAAACAAGCCTTGTCTTAGATTTGCATGTGAGGACTCGATT  800

seq1  CAATTATCTGGAACAGTGAAAACCAATTTTCAAGCCTAATCTTTTTAAGA  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAATTATCTGGAACAGTGAAAACCAATTTTCAAGCCTAATCTTTTTAAGA  850

seq1  TTTAAATCATCCAATCTGATTTGAAGTACAGAAGATTAAATCTGAGAAGA  900
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTAAATCATCCAATCTGATTTGAAGTACAGAAGATTAAATCTGAGAAGA  900

seq1  CTGGGTATATTTCCACCTTAAGAACCAGCTATACCA-TTCCTGGGTATAT  949
      |||||||||||||||||||||||||||||||||||| |||||||||||||
seq2  CTGGGTATATTTCCACCTTAAGAACCAGCTATACCATTTCCTGGGTATAT  950

seq1  ACTCAAAAGATGCTCCAACATCCTACAAGAATATTTGTTCAAATATGTTC  999
      |||| ||||||||||||||||||||| |||   |||||||||||||||||
seq2  ACTC-AAAGATGCTCCAACATCCTAC-AGATATTTTGTTCAAATATGTTC  998

seq1  CTAGCCATTTTATTCCTAACATCCAGAACCTGGAAACAGCCTAGATTCTC  1049
      |||||||||||||||||||||||||| |||| ||||||| ||||||||| 
seq2  CTAGCCATTTTATTCCTAACATCCAG-ACCT-GAAACAGGCTAGATTCT-  1045

seq1  CTCAACTGAAGAAATGGATAAAGAGAACATGGCACGTTTTTACAATGAAA  1099
      ||||||||||||||| ||| |||||||||| ||||| |||||| ||||||
seq2  CTCAACTGAAGAAAT-GAT-AAGAGAACAT-GCACG-TTTTAC-ATGAAA  1090

seq1  TACTACTTGGCTATTAAAAACAAGGACATCATGAATCTTGTATGCAAATG  1149
      |||||||| |||||| ||||||  ||||||||| ||||||||||||||||
seq2  TACTACTT-GCTATT-AAAACA--GACATCATG-ATCTTGTATGCAAATG  1135


seq1: chr16_83708308_83709481
seq2: B6Ng01-224B02.g_66_1222 (reverse)

seq1  TGAGCTTCTTGTGGTGAGTTCATAGAGAGAAACTCACCAACGTATTTCTC  50
      |||||||||  ||||||| |||||||| |||  | ||| ||||| |||||
seq2  TGAGCTTCT--TGGTGAGGTCATAGAGGGAA--TTACC-ACGTA-TTCTC  44

seq1  ACGAGGAACCTGTGGCTTCTTTCTGTTTCCACTGACTCCTGCTGGTTGGT  100
      |||||  |    ||||||||||| |||| |||||||| |||||||| |||
seq2  ACGAGACA----TGGCTTCTTTCCGTTT-CACTGACT-CTGCTGGTAGGT  88

seq1  GAGCCTTGAAGTTTCTTCTGTATTGAAATGCCCTTGCTGATTTGTGTGGT  150
      ||||||  |||||||||||||| ||||||| ||||||||| |||||||||
seq2  GAGCCTGAAAGTTTCTTCTGTA-TGAAATG-CCTTGCTGAATTGTGTGGT  136

seq1  A-TCTGCCAAGTGGACTAACTGCAGCTGCCTGTTCAGGTTTGGTGTTTGC  199
      | |||| ||||| |||||||||||||||||||||||||||| ||| ||||
seq2  ATTCTG-CAAGT-GACTAACTGCAGCTGCCTGTTCAGGTTT-GTG-TTGC  182

seq1  TAATGGACTGGACTAAGGACAATGAAGATTGGAATCACCCCAAAGAACTA  249
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAATGGACTGGACTAAGGACAATGAAGATTGGAATCACCCCAAAGAACTA  232

seq1  TTTCTAAACATGTCCACTTCCTGCATATCCTAATAACCTTTTCTTTTCCA  299
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTCTAAACATGTCCACTTCCTGCATATCCTAATAACCTTTTCTTTTCCA  282

seq1  CTATTGATGCTGGGTGGGGTGCTAGAGGGGAGGTTGAATCCTATAAATGT  349
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTATTGATGCTGGGTGGGGTGCTAGAGGGGAGGTTGAATCCTATAAATGT  332

seq1  AGGTTCAGAAACAAACAAACAAACAAACAAACAAGAGTGTCACACCATTC  399
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGTTCAGAAACAAACAAACAAACAAACAAACAAGAGTGTCACACCATTC  382

seq1  CTGAACGGAGATCTCTCCATTATATAAGCCATCTAGAAATGTAAGTCAAC  449
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGAACGGAGATCTCTCCATTATATAAGCCATCTAGAAATGTAAGTCAAC  432

seq1  TTACCCATTGTGTTTCTGCCATTTTCCTAGAGTTAAAACTCATATAAATT  499
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTACCCATTGTGTTTCTGCCATTTTCCTAGAGTTAAAACTCATATAAATT  482

seq1  AATTTAATTTAGAAAACATGGAAGTCATTATATTATTTTTATTTTATTGT  549
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATTTAATTTAGAAAACATGGAAGTCATTATATTATTTTTATTTTATTGT  532

seq1  TCAATAGCTCACTCTGTATTAAGGTAGAATAAGCTGAAAGTAATGCATAG  599
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCAATAGCTCACTCTGTATTAAGGTAGAATAAGCTGAAAGTAATGCATAG  582

seq1  ACTAAATACAAATGTGCCCATGTGTCAAATTATGTAGATAAAACTTCATT  649
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTAAATACAAATGTGCCCATGTGTCAAATTATGTAGATAAAACTTCATT  632

seq1  TCATATAGAGTAATGGACTGATTATGAAATAAGTATTAAGGTTATAATAA  699
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCATATAGAGTAATGGACTGATTATGAAATAAGTATTAAGGTTATAATAA  682

seq1  TATAGTAATGTGATACACTAATGAGATCAAGTATTTAAAAGCATAAATAA  749
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATAGTAATGTGATACACTAATGAGATCAAGTATTTAAAAGCATAAATAA  732

seq1  CAAATGTTCTCTTAAGTGTAGTTGTAAAACAATCAAATTATCTTAGGTTA  799
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAAATGTTCTCTTAAGTGTAGTTGTAAAACAATCAAATTATCTTAGGTTA  782

seq1  TAGAAATTACCATATATAATTGACAGCAATTTTAAAAATACAAGTTTAAG  849
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAGAAATTACCATATATAATTGACAGCAATTTTAAAAATACAAGTTTAAG  832

seq1  AGACTTGATTGTGGATTCACTGGACTTAAAGTAGGGAAAGATCTAAGTTA  899
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGACTTGATTGTGGATTCACTGGACTTAAAGTAGGGAAAGATCTAAGTTA  882

seq1  AAAATCTCAGTTCTATTATTGGTGTATTTAAAAAATGGAATTTTAGAATC  949
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAATCTCAGTTCTATTATTGGTGTATTTAAAAAATGGAATTTTAGAATC  932

seq1  AAGTTGAGACAGTCATTGAGAAGATACAATCACAAATTTAACTCACTGCA  999
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGTTGAGACAGTCATTGAGAAGATACAATCACAAATTTAACTCACTGCA  982

seq1  AGTTTCCTTGTCCATATGAGTAAGTTAGAAAACAATTGGAAGTATAAAAA  1049
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTTTCCTTGTCCATATGAGTAAGTTAGAAAACAATTGGAAGTATAAAAA  1032

seq1  TAGAATATAGACATTATCTTGAGACAATAAAGCTTTATTTTTCTCTAATC  1099
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAGAATATAGACATTATCTTGAGACAATAAAGCTTTATTTTTCTCTAATC  1082

seq1  AAAGGGTAAGCAAAGAAAGGTAGAGTGATTTGAAAATGCTTCACACATGA  1149
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAGGGTAAGCAAAGAAAGGTAGAGTGATTTGAAAATGCTTCACACATGA  1132

seq1  ATAAACACTTGCTTGGAAAGAATTC  1174
      |||||||||||||||||||||||||
seq2  ATAAACACTTGCTTGGAAAGAATTC  1157


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