BAC Information

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BAC

Clone NameB6Ng01-224B07
Chromosome16 (Build37)
Map Location 4,447,587 - 4,448,697
singlet/doubletsinglet
Overlap genenone
Upstream geneLOC100042270, LOC100042937, LOC100042283, Olfr161, Olfr162-ps1, Olfr163-ps1, LOC100042949, Mefv, EG620395, Zfp263, Olfr15, Zfp174, Zfp597, 1200013P24Rik, 1700037C18Rik, Cluap1, LOC664851, Nlrc3, Btbd12, Dnase1, Trap1, Crebbp, EG436332, Adcy9, EG620313
Downstream geneSrl, Tcfap4, Glis2, Magmas, Coro7, Vasn, Dnaja3, Nmral1, Hmox2, 5730403B10Rik, 4930562C15Rik, 1500031H01Rik, Mgrn1, Nudt16l1, Anks3, 4930451G09Rik, Sept12, EG432995, Rogdi, 3930401K13Rik, Ubn1, Ppl, Sec14l5, Nagpa, AU021092, Alg1, 5730409G15Rik
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-224B07.bB6Ng01-224B07.g
ACCGA038643GA038644
length1,2581,086
definitionB6Ng01-224B07.b B6Ng01-224B07.g
singlet/doublet---singlet
BLAST hitno hit dataunique
sequence
gaattctttccagcttctggctattataaatatggctgctatgaacatag
tggagcatgtgtccttattacatgttggagcatcttttgggtatatgcca
ggagtggtatagctaggtcctctggtagtactatgtccaattttctgagg
aactgccagactgacttccagagtggttgtaccagcttgcaaacccacca
acaatggaggagtgtttctcattctccatgtcctcaccagcttctgctgt
cacctgaggttttgatcttagccattctgactggtgcgagatagaatctc
agggttgttttgatttgcatttccctgatgactgaggaagttgaacattt
ctttaggtgcttctcagccattcagtattcctcagttgttaagctctgtt
ccctattttttaataggattatttggttctctggagtctaacttcttgat
ttctttgtatattttggatattagccctctatcagatgtaggattggtaa
agatcttttcctaaactgttggttgccgttttgtcctattgacagtgtcc
tttgccttacacaagctttgcaattttatgaggtcctgtttgtctattgt
tgattttagagcataaaccattgatgttctgttcaggaaaatttcccctg
tgtttgaggctcttccctactttctcttctattagtttcagtgtatctgg
ttttaggtaaatggatggaactagaaaatatcatcccaagtgaggcaacc
aaatcacaaaagaacacacatggtatgcacttactgataagtgaatatta
gtccaaaagctcagaatacccaagatacaattcacaaaccacatgaagtt
caagaagaaggaggaccaaagtgtagatgcttcagtccttcttagaaggg
gaacaaagtgcggagcagagaatgaagaaaaggccatccagagactgccc
cacctggggatgcattccattatacagtctccaaactcagacactatttg
ttggacgccaagaagtacttgctgaacaggagcctgatttaactggtctc
ctgagagctagagccctgaccaaatacagagcaaattgcctcacagccca
accattggaactgagcaaagtttcctcattggagggagttcagagaaaag
actgaagaagcctgacgggccttgttgaactcttagaagaaccacagatc
tcacctactcagaatactcccagaagacctctccccggggtattctaaat
tatacgac
gaattccaggacagccagggctacacagagaaaccctgtctcgaaaaacc
aaaaaaaaaaaaaaaaaaaaaaaaaaaaatttcaggagttgtaccctatc
ccatcctcactgatcagtgagctctccaaaattagttgagctaggccccc
tgcctctgtgcagctctatccctgacaaagtaccagaagggatggcacca
gggctggaggagagagtgggggctgcaggctgtgggcgcctactcaggcg
ctcaaaggaggcacccttctctcagcagaagcttggagccaacttttctg
tttcttatgactcagctatagttaattagccaaactgcctgagcattctt
cagttcagtccaaagctctgcccatgtgcaagctgtcggtccgccggcat
cgctccgcggctcctccccctcccctgcacttaaggtcccagagagggct
tgtcctctatgcggttctcttcacagttccaaagggcagtgcacttttct
tgtgtttcttcttttaccaggccttctgtgatgcatctctctaggatact
ttcctggagtccaagtggggagcagtgcaggggagtaggggtgagagtga
gtcacttccatcatgggataagaagcatcccatgtgggtaaagaaaaaag
ccttgaggttgttgagcctgaatctgtttgccagtcccgacatgaattag
cagtgcgacgctgggtagctgcttggctcaccggggccacagtttctgta
caacaaataggaggtcatggcgtctcttgtgctagatccctgagattggt
tgggtgagatactggaggtagaggcaaacggtgtcagactggcttccagt
gggagttcagtaatgctgctgtcctggctctgccccaccccaacccttct
ggaaattctgattttcatttggcccaagtctctaagcagtgttgatgggt
gagatcaaattgtcgtgatggaaagtcttggcttctttggacttccacag
tccagagactcagatgtgaacacgttctgctactagatgtgactggaagg
aacacaacatctgtcactggttgctacctgatgtgt
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr16_4447587_4448697
seq2: B6Ng01-224B07.g_65_1150 (reverse)

seq1  ACACATCAGGGTAAGCAAACAAGTGACAGATGGTGTGTGTGGTCCCTTCC  50
      ||||||||||   ||| ||| ||||||||||| |||||    |||  | |
seq2  ACACATCAGG--TAGC-AACCAGTGACAGATGTTGTGT----TCC--TTC  41

seq1  CAGGCCACCCTCTTGAGTAGCAGAACGTGTCCACATACTGAGTCTCTGGA  100
      ||| |   | |||  ||||||||||||||| ||||| |||||||||||||
seq2  CAGTC--ACATCT--AGTAGCAGAACGTGTTCACAT-CTGAGTCTCTGGA  86

seq1  CCTGTGGGAGTCCCAAAAGGAAGCAAGACTTTCCATCACACAAATTTGGA  150
       |||||| |||||  |||| |  ||||||||||||||||   ||||| ||
seq2  -CTGTGGAAGTCC--AAAGAAGCCAAGACTTTCCATCACGACAATTT-GA  132

seq1  TCTTCCACCCCATCACCACCTGCTTAGGAGACCTTGGGCCAAATGAAAAT  200
      |||  || ||||||| || ||||||| |||| ||||||||||||||||||
seq2  TCT--CA-CCCATCAACA-CTGCTTA-GAGA-CTTGGGCCAAATGAAAAT  176

seq1  CAGAATTTCCAGAAAGGGTTGGGGTGGGGCAGAGCCAGGACAGCAGCATT  250
      |||||||||||| ||||||||||||||||||||||||||||||||||| |
seq2  CAGAATTTCCAG-AAGGGTTGGGGTGGGGCAGAGCCAGGACAGCAGCA-T  224

seq1  TACTGAACTCCCACTGGAAGCCAGTCTGACACCGTTTGCCTCTACCTCCA  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TACTGAACTCCCACTGGAAGCCAGTCTGACACCGTTTGCCTCTACCTCCA  274

seq1  GTATCTCACCCAA-CAATCTCAGGGATCTAGCACAAGAGACGCCATGACC  349
      ||||||||||||| ||||||||||||||||||||||||||||||||||||
seq2  GTATCTCACCCAACCAATCTCAGGGATCTAGCACAAGAGACGCCATGACC  324

seq1  TCCTATTTGTTGTACAGAAACTGTGGCCCCGGTGAGCCAAGCAGCTACCC  399
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCTATTTGTTGTACAGAAACTGTGGCCCCGGTGAGCCAAGCAGCTACCC  374

seq1  AGCGTCGCACTGCTAATTCATGTCGGGACTGGCAAACAGATTCAGGCTCA  449
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGCGTCGCACTGCTAATTCATGTCGGGACTGGCAAACAGATTCAGGCTCA  424

seq1  ACAACCTCAAGGCTTTTTTCTTTACCCACATGGGATGCTTCTTATCCCAT  499
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACAACCTCAAGGCTTTTTTCTTTACCCACATGGGATGCTTCTTATCCCAT  474

seq1  GATGGAAGTGACTCACTCTCACCCCTACTCCCCTGCACTGCTCCCCACTT  549
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GATGGAAGTGACTCACTCTCACCCCTACTCCCCTGCACTGCTCCCCACTT  524

seq1  GGACTCCAGGAAAGTATCCTAGAGAGATGCATCACAGAAGGCCTGGTAAA  599
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGACTCCAGGAAAGTATCCTAGAGAGATGCATCACAGAAGGCCTGGTAAA  574

seq1  AGAAGAAACACAAGAAAAGTGCACTGCCCTTTGGAACTGTGAAGAGAACC  649
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAAGAAACACAAGAAAAGTGCACTGCCCTTTGGAACTGTGAAGAGAACC  624

seq1  GCATAGAGGACAAGCCCTCTCTGGGACCTTAAGTGCAGGGGAGGGGGAGG  699
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCATAGAGGACAAGCCCTCTCTGGGACCTTAAGTGCAGGGGAGGGGGAGG  674

seq1  AGCCGCGGAGCGATGCCGGCGGACCGACAGCTTGCACATGGGCAGAGCTT  749
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGCCGCGGAGCGATGCCGGCGGACCGACAGCTTGCACATGGGCAGAGCTT  724

seq1  TGGACTGAACTGAAGAATGCTCAGGCAGTTTGGCTAATTAACTATAGCTG  799
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGACTGAACTGAAGAATGCTCAGGCAGTTTGGCTAATTAACTATAGCTG  774

seq1  AGTCATAAGAAACAGAAAAGTTGGCTCCAAGCTTCTGCTGAGAGAAGGGT  849
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTCATAAGAAACAGAAAAGTTGGCTCCAAGCTTCTGCTGAGAGAAGGGT  824

seq1  GCCTCCTTTGAGCGCCTGAGTAGGCGCCCACAGCCTGCAGCCCCCACTCT  899
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCCTCCTTTGAGCGCCTGAGTAGGCGCCCACAGCCTGCAGCCCCCACTCT  874

seq1  CTCCTCCAGCCCTGGTGCCATCCCTTCTGGTACTTTGTCAGGGATAGAGC  949
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCCTCCAGCCCTGGTGCCATCCCTTCTGGTACTTTGTCAGGGATAGAGC  924

seq1  TGCACAGAGGCAGGGGGCCTAGCTCAACTAATTTTGGAGAGCTCACTGAT  999
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGCACAGAGGCAGGGGGCCTAGCTCAACTAATTTTGGAGAGCTCACTGAT  974

seq1  CAGTGAGGATGGGATAGGGTACAACTCCTGAAATTTTTTTTTTTTTTTTT  1049
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGTGAGGATGGGATAGGGTACAACTCCTGAAATTTTTTTTTTTTTTTTT  1024

seq1  TTTTTTTTTTTTGGTTTTTCGAGACAGGGTTTCTCTGTGTAGCCCTGGCT  1099
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTTTTTTTTTTGGTTTTTCGAGACAGGGTTTCTCTGTGTAGCCCTGGCT  1074

seq1  GTCCTGGAATTC  1111
      ||||||||||||
seq2  GTCCTGGAATTC  1086