BAC Information

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BAC

Clone NameB6Ng01-225B03
Chromosome16 (Build37)
Map Location 19,018,555 - 19,019,346
singlet/doubletsinglet
Overlap genenone
Upstream geneDgcr6, Prodh, Rtn4r, EG665975, Zdhhc8, Ranbp1, Htf9c, Dgcr8, D16H22S680E, LOC100042884, Arvcf, Comt, Txnrd2, Gnb1l, Tbx1, Gp1bb, Sept5, LOC622795, Cldn5, Cdc45l, Ufd1l, 2510002D24Rik, Mrpl40, Hira
Downstream geneIgl, Igl-C1, Igl-J1, Igl-C3, Igl-J3p, Igl-J3, Igl-V1, Igl-C4, Igl-J4, Igl-C2, Igl-J2, Igl-V3, Igl-V2, Olfr164, Olfr165, Olfr166, Olfr167, Olfr168, Olfr169, Olfr170, Olfr171, LOC100043444, Lamp3, B3gnt5, LOC100042935, A930003A15Rik, Klhl6
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-225B03.b
ACCGA039358
length1,018
definitionB6Ng01-225B03.b
singlet/doubletsinglet---
BLAST hituniqueno hit data
sequence
gaattctcattggtttactgtaaaactgaaacacttagaactgtctcaaa
gcatttgtggacatgtccagtcccttaatataacaaactcctattccctc
atcttcatggtctttaaaggtacaatataccatatgtccaaacttagaaa
gcaggacatataggtatctattcacttcttattttgtaattttgtcatgc
atgttgttgatataaattgtgagatttgttctgatatccatatttgggtg
aaacccttcaaatagcctaaagcctgtgccggttgcttgaaccctgacat
ttcaattcttaacatttatgccccaaatagaaagacaccttcctttgtaa
aggaaagactactatagtttaagttacatattgactctcacatactgata
gggggagacttcaataccacactctcagaaatactggagctaacagacat
aataaacatagcgatctaacagatagttacagatttaagaaagttttccc
atgctcatggatcaataggattgacattgtaaaaatggccatcttaccaa
aatcattctacagattcaatatcatccccaccaaatggtaagacttccag
taattttttcattgttcatcattgttttaactatcctttatttttttcct
atatgttgaaaactgtccttttaaggtcagggaaggattgtgttggaatt
ttgatgggagataatgtcagggcaatacagctgggtttgagggggcattt
gaggaatgattgaaacctactgtagtagaaacctaaaatatatgaatgtg
attgtactgagatcttcttatattggaagatatggagtcacaactggcca
gttcttttcatcaaatgaggcttccagtagctggattgagttatattcaa
ttgcgttgttgaccaaggaggtcctattgaagtcacaagtcctccaaact
aaactaggctgttgctaagataatgggctgatagtgccactccttgccaa
agaaaatagcaacacaac
quality valuesOpen.




Alignment Information

BAC End 1BAC End 2
seq1: chr16_19018555_19019346
seq2: B6Ng01-225B03.b_43_834

seq1  GAATTCTCATTGGTTTACTGTAAAACTGAAACACTTAGAACTGTCTCAAA  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCTCATTGGTTTACTGTAAAACTGAAACACTTAGAACTGTCTCAAA  50

seq1  GCATTTGTGGACATGTCCAGTCCCTTAATATAACAAACTCCTATTCCCTC  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCATTTGTGGACATGTCCAGTCCCTTAATATAACAAACTCCTATTCCCTC  100

seq1  ATCTTCATGGTCTTTAAAGGTACAATATACCATATGTCCAAACTTAGAAA  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATCTTCATGGTCTTTAAAGGTACAATATACCATATGTCCAAACTTAGAAA  150

seq1  GCAGGACATATAGGTATCTATTCACTTCTTATTTTGTAATTTTGTCATGC  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCAGGACATATAGGTATCTATTCACTTCTTATTTTGTAATTTTGTCATGC  200

seq1  ATGTTGTTGATATAAATTGTGAGATTTGTTCTGATATCCATATTTGGGTG  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGTTGTTGATATAAATTGTGAGATTTGTTCTGATATCCATATTTGGGTG  250

seq1  AAACCCTTCAAATAGCCTAAAGCCTGTGCCGGTTGCTTGAACCCTGACAT  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAACCCTTCAAATAGCCTAAAGCCTGTGCCGGTTGCTTGAACCCTGACAT  300

seq1  TTCAATTCTTAACATTTATGCCCCAAATAGAAAGACACCTTCCTTTGTAA  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCAATTCTTAACATTTATGCCCCAAATAGAAAGACACCTTCCTTTGTAA  350

seq1  AGGAAAGACTACTATAGTTTAAGTTACATATTGACTCTCACATACTGATA  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGAAAGACTACTATAGTTTAAGTTACATATTGACTCTCACATACTGATA  400

seq1  GGGGGAGACTTCAATACCACACTCTCAGAAATACTGGAGCTAACAGACAT  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGGGGAGACTTCAATACCACACTCTCAGAAATACTGGAGCTAACAGACAT  450

seq1  AATAAACATAGCGATCTAACAGATAGTTACAGATTTAAGAAAGTTTTCCC  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATAAACATAGCGATCTAACAGATAGTTACAGATTTAAGAAAGTTTTCCC  500

seq1  ATGCTCATGGATCAATAGGATTGACATTGTAAAAATGGCCATCTTACCAA  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGCTCATGGATCAATAGGATTGACATTGTAAAAATGGCCATCTTACCAA  550

seq1  AATCATTCTACAGATTCAATATCATCCCCACCAAATGGTAAGACTTCCAG  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATCATTCTACAGATTCAATATCATCCCCACCAAATGGTAAGACTTCCAG  600

seq1  TAATTTTTTCATTGTTCATCATTGTTTTAACTATCCTTTATTTTTTTCCT  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAATTTTTTCATTGTTCATCATTGTTTTAACTATCCTTTATTTTTTTCCT  650

seq1  ATATGTTGAAAACTGTCCTTTTAAGGTCAGGGAAGGATTGTGTTGGAATT  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATATGTTGAAAACTGTCCTTTTAAGGTCAGGGAAGGATTGTGTTGGAATT  700

seq1  TTGATGGGAGATAATGTCAGGGCAATACAGCTGGGTTTGAGGGGGCATTT  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGATGGGAGATAATGTCAGGGCAATACAGCTGGGTTTGAGGGGGCATTT  750

seq1  GAGGAATGATTGAAACCTACTGTAGTAGAAACCTAAAATATA  792
      ||||||||||||||||||||||||||||||||||||||||||
seq2  GAGGAATGATTGAAACCTACTGTAGTAGAAACCTAAAATATA  792