BAC Information

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BAC

Clone NameB6Ng01-225N04
Chromosome16 (Build37)
Map Location 54,017,308 - 54,018,334
singlet/doubletsinglet
Overlap genenone
Upstream geneLOC433027
Downstream geneLOC100043442, LOC100043449, LOC667927
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-225N04.bB6Ng01-225N04.g
ACCGA039919GA039920
length1,0291,132
definitionB6Ng01-225N04.b B6Ng01-225N04.g
singlet/doubletsinglet---
BLAST hituniqueno hit data
sequence
gaattctctactatccaattcaaggaatcaaagagtatctaattatacac
tttgaattgcactaaattgcactgagctaaggtagagcagggtaatttgc
tatttaccaaagaagctgtttaacctttattaaatgttggtgattggtaa
ttatgcacagtgagggataatattaagaattaaaaaaaacacaaatggaa
gaatgttcagaatatatttttaagtgttaccttagtagcattattaaaaa
taaataatcagactcaattctaacattttttcactgtcatttaagatggt
tatacaaatgtttctgtttttaccaataattttatatcatgcatttcata
aattcttgatatgcagagaattctattgtctttttttgtgaagtatgtgc
agggtgatatgtttattattgttgatagtcattattgttctagtgttctt
ttaattacaatcattataatgagcattcttggaatataatcagaattctt
gggaacacaaaagtgggagactagcaaagtttccaactgtaatataattt
ttaagtatcttctcaataacatttgtgatatctgggggaaattagaaaga
taaggtttgtcaataactaggtagaagcctgaggatatttctagctcctc
tcttcagagcaattttgactgaaaagcttaactacaaacaagtagaaagt
ctcaaatcagttccatttcagaaaaacagccttgcctgaagttatttgga
tatattggagttgaaaaaacaagctctaaggaaattttgatatgaaccag
aagtgattcccatgaggtagtaaaatcaagtaatgcattttagaatctga
ttataaagaaggttaaagttcatattttcagaatatttggacagattaac
ttaatgttctattataaaagtgagagtaagttttcacccaagtggtggat
taaggtttcaaaaacaagacattgacctctaacctgccctgcctgcaggt
ggtgctagggcagtggtaccttccaaact

gaattctttgttcagctctgagccccatcttttaagggggttatttgatt
tttctggagtccaccctcttgagttctttatatatattggatattattcc
cctatctgatttaagataggtaaagatcctttcccaatctgttggtggtc
tttttgtcttattgacggtgtcttttgccttgcagaagttttgcagtttc
atgaggtaccatttgtcaatcctcaatcttaaagcacaacccattgctgt
tctattcaggaattttttccctgtgcccatatcttagagacttttcccca
ctttctcctctataagattcagtgtctctggttttatgttaagttccttg
atccacttagatttgaccttagtacatggagagaggaatgggtcgattca
cattcctctacatgataacaaccagttgtgccagcaccatttgtagaaaa
cgctgtctttcttccactggatggttatagctcccttgtcgaagatcaag
tgaccataggtgtgtgggttcatttctgggtcttcaattctattccattg
gtctacttgtctgtcactattccagtaccatgcagtttttataacaattg
ctctgtaataaagctttaggtcaggcatggtgattccaccagaggttctt
ttatccttgagaagagcttttgctatcctaggttttttgttattccagat
gaatttgcagattgctctttctaattcgttgaagaattgagttggaattt
tgatggggattgcattgaatctgtagattgcttttggcaagatagccatt
tttacaatattgatcctgccaatccatgagcatgggagatctttccatct
tctgagatcttctttaatttctttcttcagggacttgaagtttttatcat
agagatctttcacttccttagttagagtcatgtcacgccaagattatttt
atattatttgtgactattgagaagggtgttgtttccctaatttcttttct
tcagcctgtttatcttgtgtagaggaaaaggcattgacttgtttgagtta
attttaatccagctatttcaccgtaagctgttaattcgtttagaatctct
ctgtggaatttcaggtcacgatatattactat
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr16_54017308_54018334
seq2: B6Ng01-225N04.b_49_1077

seq1  GAATTCTCTACTATCCAATTCAAGGAATCAAAGAGTATCTAATTATACAC  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCTCTACTATCCAATTCAAGGAATCAAAGAGTATCTAATTATACAC  50

seq1  TTTGAATTGCACTAAATTGCACTGAGCTAAGGTAGAGCAGGGTAATTTGC  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTGAATTGCACTAAATTGCACTGAGCTAAGGTAGAGCAGGGTAATTTGC  100

seq1  TATTTACCAAAGAAGCTGTTTAACCTTTATTAAATGTTGGTGATTGGTAA  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATTTACCAAAGAAGCTGTTTAACCTTTATTAAATGTTGGTGATTGGTAA  150

seq1  TTATGCACAGTGAGGGATAATATTAAGAATTAAAAAAAACACAAATGGAA  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTATGCACAGTGAGGGATAATATTAAGAATTAAAAAAAACACAAATGGAA  200

seq1  GAATGTTCAGAATATATTTTTAAGTGTTACCTTAGTAGCATTATTAAAAA  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATGTTCAGAATATATTTTTAAGTGTTACCTTAGTAGCATTATTAAAAA  250

seq1  TAAATAATCAGACTCAATTCTAACATTTTTTCACTGTCATTTAAGATGGT  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAAATAATCAGACTCAATTCTAACATTTTTTCACTGTCATTTAAGATGGT  300

seq1  TATACAAATGTTTCTGTTTTTACCAATAATTTTATATCATGCATTTCATA  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATACAAATGTTTCTGTTTTTACCAATAATTTTATATCATGCATTTCATA  350

seq1  AATTCTTGATATGCAGAGAATTCTATTGTCTTTTTTTGTGAAGTATGTGC  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATTCTTGATATGCAGAGAATTCTATTGTCTTTTTTTGTGAAGTATGTGC  400

seq1  AGGGTGATATGTTTATTATTGTTGATAGTCATTATTGTTCTAGTGTTCTT  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGGTGATATGTTTATTATTGTTGATAGTCATTATTGTTCTAGTGTTCTT  450

seq1  TTAATTACAATCATTATAATGAGCATTCTTGGAATATAATCAGAATTCTT  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTAATTACAATCATTATAATGAGCATTCTTGGAATATAATCAGAATTCTT  500

seq1  GGGAACACAAAAGTGGGAGACTAGCAAAGTTTCCAACTGTAATATAATTT  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGGAACACAAAAGTGGGAGACTAGCAAAGTTTCCAACTGTAATATAATTT  550

seq1  TTAAGTATCTTCTCAATAACATTTGTGATATCTGGGGGAAATTAGAAAGA  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTAAGTATCTTCTCAATAACATTTGTGATATCTGGGGGAAATTAGAAAGA  600

seq1  TAAGGTTTGTCAATAACTAGGTAGAAGCCTGAGGATATTTCTAGCTCCTC  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAAGGTTTGTCAATAACTAGGTAGAAGCCTGAGGATATTTCTAGCTCCTC  650

seq1  TCTTCAGAGCAATTTTGACTGAAAAGCTTAACTACAAACAAGTAGAAAGT  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTTCAGAGCAATTTTGACTGAAAAGCTTAACTACAAACAAGTAGAAAGT  700

seq1  CTCAAATCAGTTCCATTTCAGAAAAACAGCCTTGCCTGAAGTTATTTGGA  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCAAATCAGTTCCATTTCAGAAAAACAGCCTTGCCTGAAGTTATTTGGA  750

seq1  TATATTGGAGTTGAAAAAACAAGCTCTAAGGAAATTTTGATATGAACCAG  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATATTGGAGTTGAAAAAACAAGCTCTAAGGAAATTTTGATATGAACCAG  800

seq1  AAGTGATTCCCATGAGGTAGTAAAATCAAGTAATGCATTTAAGAATCTGA  850
      |||||||||||||||||||||||||||||||||||||||| |||||||||
seq2  AAGTGATTCCCATGAGGTAGTAAAATCAAGTAATGCATTTTAGAATCTGA  850

seq1  TTATAAAGAAGGTTAAAGTTCATA-TTTCAGAATA-TTGGACAGATTAAC  898
      |||||||||||||||||||||||| |||||||||| ||||||||||||||
seq2  TTATAAAGAAGGTTAAAGTTCATATTTTCAGAATATTTGGACAGATTAAC  900

seq1  TTAATGTTCTATTATAAAAGTGAGAGTAAGTTTTCAACCAAGTGGTGGAA  948
      |||||||||||||||||||||||||||||||||||| |||||||||||| 
seq2  TTAATGTTCTATTATAAAAGTGAGAGTAAGTTTTCACCCAAGTGGTGGAT  950

seq1  TTAGGTTTCAAAAACAAGAACATTGACCTCTAACCTGCCCTGCCTGCAGG  998
      | |||||||||||||||| |||||||||||||||||||||||||||||||
seq2  TAAGGTTTCAAAAACAAG-ACATTGACCTCTAACCTGCCCTGCCTGCAGG  999

seq1  TTGTGCTAGGGCAGTGGTACC-TCCAAACT  1027
      | ||||||||||||||||||| ||||||||
seq2  TGGTGCTAGGGCAGTGGTACCTTCCAAACT  1029


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