BAC Information

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BAC

Clone NameB6Ng01-227P08
Chromosome16 (Build37)
Map Location 8,172,887 - 8,313,745
singlet/doubletdoublet
Overlap genenone
Upstream geneA2bp1
Downstream gene4930511J11Rik, BC024814, Abat, LOC665207, Tmem186, Pmm2, Carhsp1, EG436336, Usp7, LOC665231, 1810013L24Rik, LOC100043106
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-227P08.bB6Ng01-227P08.g
ACCGA041494GA041495
length1,1331,073
definitionB6Ng01-227P08.b B6Ng01-227P08.g
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(8,312,614 - 8,313,745)(8,172,887 - 8,173,947)
sequence
gaattcatacaataagcaagtctagcattataggagcttcccttggcttc
tagaaagctctgacaaggagagatcaagagtcagagccattggggaacat
cagtgacagagcaaagagaagaagcaaacaaacccagctgtgctatggac
agtaagaaaaacacaaggaactgtctagcgctgtgtgacaggccctgtgg
ctgccgtaaccagctgcggctgatcatggggcaggcaggtagagaatagg
acagaatctaagactggattcctgagtacagattgtaggaggcagggaca
aggcaggaagatacactcactgagccaccctgtggctagggctcttactg
atgtggcttcactcatttctgataagaacctccagagtaaatggccaata
aaccatatgaataaatgctggatgtcactaggcaccagagaaacacacat
caaaactacactgagattccatcttaccccagtcagaagagtgatccata
agaaaataaataacaacagattctggcaaagatgtgaatataaggaaacc
tgtatacaacacaaggttttccagtagtaagtaggatggacagtcacatc
tcagctacaattgtactgctgtggcagatgagaccataggttttgactga
tactaggtgactgtcattatgccaataccattcatacaaagctgtcacca
tgccaataccacacacacatagggcatgggtaatggggtccatgctcagt
ctccgagtccaaaactctggtgctttcttctttcatctctctcttagctg
attcctatccctagtgttgctgcctccccttcctcagaggtctacaagtc
ctcagacatgccaagctacttctagcattttgggtcttttgtgtcccctt
actttttcctagtgctgtattcatggagtcagcccccgtagctggagctc
tcctgaagggtttgtgttcctctgagttgggggtcacaagaacaggccaa
accagctttgaaactcactctgtagccaagaatagcttcattaagtgtga
tctttcctgcctctatcagagtgctggattacacactgtgcatcaaccct
gtggttttctctctttctggggtgtcccatatg

gaattcaattcaattgaatggctctgggagctgcttgggtgacaggggga
aggggatagcggcatagagtttatggtgaagatgttgataaatgggaggt
ttcacaactctggctcctgctcttcctcagaccctcctgttttctttgtt
tctgggacctaatcctctttgtagtccagtgttgtaggtatcagcccaca
ggtgggaagaagggtgcaggaagatgctctgcctgtgcaacaaggaccat
gaagaaggagccttttgctataagcccagcaaagatatgagacttgaatt
ccatcactaggggattcacatttatcttgcatctttcaggaatttttttg
aaaatgaaaaaaaggccatgggccctgaggatgggagaagtggaaacatg
aaacctcagtttgcttttttatggcttttgccctcaaaagttccacttct
tggtggcttgtgtctttagcagtacatttctgtttcacagaaacctagtt
gttcccctcccatgcagtgagtttttctgtacctattataccacagagaa
gctgaggtacactgctcttaccccctccaatcaataattacagaagccaa
atccttgctacagactaaacacttaaactcctttagactaatcaagaaaa
ggaaggggagttagcaagtagaacactcaaaatccaaataaaaattccaa
aacccttagtgtccatggtctccacaggtcttggggccccttgtgaaatc
tgtaaacatttgccagcgaacatgttcattttgttctaagctatttaccc
catggaggaggaggttccatccactcgccagtttctaaaacaccaaaatc
tcctcagtgagaacgggatgcagaaatcagtctatcgggaatagaagaga
ataaaaggctatgcagctagaggcgccttttgcaaaggctcttcagtata
ccagaatttgaacccaaaattcctctccaaatcaccagacagccattccc
cagccagccccttaacctcagtggtgaaccaaatgtctggtgaacaactc
ctttaggaccggtttccatagag
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr16_8312614_8313745
seq2: B6Ng01-227P08.b_46_1178 (reverse)

seq1  CATATGGGACACCCCAG-AAGAGAGAAAACCCACAGGGTGTGATGGCACA  49
      ||||||||||||||||| ||||||||||| ||||||||| |||| |||| 
seq2  CATATGGGACACCCCAGAAAGAGAGAAAA-CCACAGGGT-TGAT-GCAC-  46

seq1  AGTGTGTAATCCCAGCACTCCTGAATAGAGGCA-GAAAGATCACACTT-A  97
      |||||||||| |||||||| ||| ||||||||| |||||||||||||| |
seq2  AGTGTGTAAT-CCAGCACT-CTG-ATAGAGGCAGGAAAGATCACACTTAA  93

seq1  TGAAGCTA-TCTGGGCTACAGAGTGAG-TTCAAAGCTGGTTTGGCCTGT-  144
      |||||||| ||| |||||||||||||| ||||||||||||||||||||| 
seq2  TGAAGCTATTCTTGGCTACAGAGTGAGTTTCAAAGCTGGTTTGGCCTGTT  143

seq1  -CTGTGACCCCCAACTCAGAGGAACACAAACCCTTCAGGAGAGCTCCAGC  193
        ||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTGTGACCCCCAACTCAGAGGAACACAAACCCTTCAGGAGAGCTCCAGC  193

seq1  TACGGGGGCTGACTCCATGAATACAGCACTAGGAAAAAGTAAGGGGACAC  243
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TACGGGGGCTGACTCCATGAATACAGCACTAGGAAAAAGTAAGGGGACAC  243

seq1  AAAAGACCC-AAATGCTAGAAGTAGCTTGGCATGTCTGAGGACTTGTAGA  292
      ||||||||| ||||||||||||||||||||||||||||||||||||||||
seq2  AAAAGACCCAAAATGCTAGAAGTAGCTTGGCATGTCTGAGGACTTGTAGA  293

seq1  CCTCTGAGGAAGGGGAGGCAGCAACACTAGGGATAGGAATCAGCTAAGAG  342
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTCTGAGGAAGGGGAGGCAGCAACACTAGGGATAGGAATCAGCTAAGAG  343

seq1  AGAGATGAAAGAAGAAAGCACCAGAGTTTTGGACTCGGAGACTGAGCATG  392
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAGATGAAAGAAGAAAGCACCAGAGTTTTGGACTCGGAGACTGAGCATG  393

seq1  GACCCCATTACCCATGCCCTATGTGTGTGTGGTATTGGCATGGTGACAGC  442
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GACCCCATTACCCATGCCCTATGTGTGTGTGGTATTGGCATGGTGACAGC  443

seq1  TTTGTATGAATGGTATTGGCATAATGACAGTCACCTAGTATCAGTCAAAA  492
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTGTATGAATGGTATTGGCATAATGACAGTCACCTAGTATCAGTCAAAA  493

seq1  CCTATGGTCTCATCTGCCACAGCAGTACAATTGTAGCTGAGATGTGACTG  542
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTATGGTCTCATCTGCCACAGCAGTACAATTGTAGCTGAGATGTGACTG  543

seq1  TCCATCCTACTTACTACTGGAAAACCTTGTGTTGTATACAGGTTTCCTTA  592
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCATCCTACTTACTACTGGAAAACCTTGTGTTGTATACAGGTTTCCTTA  593

seq1  TATTCACATCTTTGCCAGAATCTGTTGTTATTTATTTTCTTATGGATCAC  642
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATTCACATCTTTGCCAGAATCTGTTGTTATTTATTTTCTTATGGATCAC  643

seq1  TCTTCTGACTGGGGTAAGATGGAATCTCAGTGTAGTTTTGATGTGTGTTT  692
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTTCTGACTGGGGTAAGATGGAATCTCAGTGTAGTTTTGATGTGTGTTT  693

seq1  CTCTGGTGCCTAGTGACATCCAGCATTTATTCATATGGTTTATTGGCCAT  742
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCTGGTGCCTAGTGACATCCAGCATTTATTCATATGGTTTATTGGCCAT  743

seq1  TTACTCTGGAGGTTCTTATCAGAAATGAGTGAAGCCACATCAGTAAGAGC  792
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTACTCTGGAGGTTCTTATCAGAAATGAGTGAAGCCACATCAGTAAGAGC  793

seq1  CCTAGCCACAGGGTGGCTCAGTGAGTGTATCTTCCTGCCTTGTCCCTGCC  842
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTAGCCACAGGGTGGCTCAGTGAGTGTATCTTCCTGCCTTGTCCCTGCC  843

seq1  TCCTACAATCTGTACTCAGGAATCCAGTCTTAGATTCTGTCCTATTCTCT  892
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCTACAATCTGTACTCAGGAATCCAGTCTTAGATTCTGTCCTATTCTCT  893

seq1  ACCTGCCTGCCCCATGATCAGCCGCAGCTGGTTACGGCAGCCACAGGGCC  942
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACCTGCCTGCCCCATGATCAGCCGCAGCTGGTTACGGCAGCCACAGGGCC  943

seq1  TGTCACACAGCGCTAGACAGTTCCTTGTGTTTTTCTTACTGTCCATAGCA  992
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTCACACAGCGCTAGACAGTTCCTTGTGTTTTTCTTACTGTCCATAGCA  993

seq1  CAGCTGGGTTTGTTTGCTTCTTCTCTTTGCTCTGTCACTGATGTTCCCCA  1042
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGCTGGGTTTGTTTGCTTCTTCTCTTTGCTCTGTCACTGATGTTCCCCA  1043

seq1  ATGGCTCTGACTCTTGATCTCTCCTTGTCAGAGCTTTCTAGAAGCCAAGG  1092
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGGCTCTGACTCTTGATCTCTCCTTGTCAGAGCTTTCTAGAAGCCAAGG  1093

seq1  GAAGCTCCTATAATGCTAGACTTGCTTATTGTATGAATTC  1132
      ||||||||||||||||||||||||||||||||||||||||
seq2  GAAGCTCCTATAATGCTAGACTTGCTTATTGTATGAATTC  1133


seq1: chr16_8172887_8173947
seq2: B6Ng01-227P08.g_69_1141

seq1  GAATTCAATTCAATTGAATGGCTCTGGGAGCTGCTTGGGTGACAGGGGGA  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCAATTCAATTGAATGGCTCTGGGAGCTGCTTGGGTGACAGGGGGA  50

seq1  AGGGGATAGCGGCATAGAGTTTATGGTGAAGATGTTGATAAATGGGAGGT  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGGGATAGCGGCATAGAGTTTATGGTGAAGATGTTGATAAATGGGAGGT  100

seq1  TTCACAACTCTGGCTCCTGCTCTTCCTCAGACCCTCCTGTTTTCTTTGTT  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCACAACTCTGGCTCCTGCTCTTCCTCAGACCCTCCTGTTTTCTTTGTT  150

seq1  TCTGGGACCTAATCCTCTTTGTAGTCCAGTGTTGTAGGTATCAGCCCACA  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTGGGACCTAATCCTCTTTGTAGTCCAGTGTTGTAGGTATCAGCCCACA  200

seq1  GGTGGGAAGAAGGGTGCAGGAAGATGCTCTGCCTGTGCAACAAGGACCAT  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGTGGGAAGAAGGGTGCAGGAAGATGCTCTGCCTGTGCAACAAGGACCAT  250

seq1  GAAGAAGGAGCCTTTTGCTATAAGCCCAGCAAAGATATGAGACTTGAATT  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAAGAAGGAGCCTTTTGCTATAAGCCCAGCAAAGATATGAGACTTGAATT  300

seq1  CCATCACTAGGGGATTCACATTTATCTTGCATCTTTCAGGAATTTTTTTG  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCATCACTAGGGGATTCACATTTATCTTGCATCTTTCAGGAATTTTTTTG  350

seq1  AAAATGAAAAAAAGGCCATGGGCCCTGAGGATGGGAGAAGTGGAAACATG  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAATGAAAAAAAGGCCATGGGCCCTGAGGATGGGAGAAGTGGAAACATG  400

seq1  AAACCTCAGTTTGCTTTTTTATGGCTTTTGCCCTCAAAAGTTCCACTTCT  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAACCTCAGTTTGCTTTTTTATGGCTTTTGCCCTCAAAAGTTCCACTTCT  450

seq1  TGGTGGCTTGTGTCTTTAGCAGTACATTTCTGTTTCACAGAAACCTAGTT  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGTGGCTTGTGTCTTTAGCAGTACATTTCTGTTTCACAGAAACCTAGTT  500

seq1  GTTCCCCTCCCATGCAGTGAGTTTTTCTGTACCTATTATACCACAGAGAA  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTCCCCTCCCATGCAGTGAGTTTTTCTGTACCTATTATACCACAGAGAA  550

seq1  GCTGAGGTACACTGCTCTTACCCCCTCCAATCAATAATTACAGAAGCCAA  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCTGAGGTACACTGCTCTTACCCCCTCCAATCAATAATTACAGAAGCCAA  600

seq1  ATCCTTGCTACAGACTAAACACTTAAACTCCTTTAGACTAATCAAGAAAA  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATCCTTGCTACAGACTAAACACTTAAACTCCTTTAGACTAATCAAGAAAA  650

seq1  GGAAGGGGAGTTAGCAAGTAGAACACTCAAAATCCAAATAAAAATTCCAA  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGAAGGGGAGTTAGCAAGTAGAACACTCAAAATCCAAATAAAAATTCCAA  700

seq1  AACCCTTAGTGTCCATGGTCTCCACAGGTCTTGGGGCCCCTTGTGAAATC  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACCCTTAGTGTCCATGGTCTCCACAGGTCTTGGGGCCCCTTGTGAAATC  750

seq1  TGTAAACATTTGCCAGCGAACATGTTCATTTTGTTCTAAGCTATTTACCC  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTAAACATTTGCCAGCGAACATGTTCATTTTGTTCTAAGCTATTTACCC  800

seq1  CATGGAGGAGGAGGTTCCATCCACTCGCCAGTTTCTAAAACACCAAAATC  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATGGAGGAGGAGGTTCCATCCACTCGCCAGTTTCTAAAACACCAAAATC  850

seq1  TCCTCAGTGAGAACGGGATGCAGAAATCAGTCTATC-GGAATAG-AGAGA  898
      |||||||||||||||||||||||||||||||||||| ||||||| |||||
seq2  TCCTCAGTGAGAACGGGATGCAGAAATCAGTCTATCGGGAATAGAAGAGA  900

seq1  ATAAAAGGCTATGCAGCTAGAGGCGCC-TTTGCAAAGGCTCTTCAGTATA  947
      ||||||||||||||||||||||||||| ||||||||||||||||||||||
seq2  ATAAAAGGCTATGCAGCTAGAGGCGCCTTTTGCAAAGGCTCTTCAGTATA  950

seq1  CCAGAATTTGA--CCCAAAGTCCTCTC--AAACA-CAGACAGCCA-TCCA  991
      |||||||||||  || ||| |||||||  || || |||||||||| ||| 
seq2  CCAGAATTTGAACCCAAAATTCCTCTCCAAATCACCAGACAGCCATTCCC  1000

seq1  CAGCCAGCCCCTTAACCTTCAGTGGTG-ACCAAATGTCT-GTGAACAACT  1039
      ||||||||||||||||| ||||||||| ||||||||||| ||||||||||
seq2  CAGCCAGCCCCTTAACC-TCAGTGGTGAACCAAATGTCTGGTGAACAACT  1049

seq1  -CTTTAGGAACCGTTT-CATAGAG  1061
       |||||||| | |||| |||||||
seq2  CCTTTAGGACCGGTTTCCATAGAG  1073


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