BAC Information

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BAC

Clone NameB6Ng01-231J05
Chromosome16 (Build37)
Map Location 46,673,790 - 46,832,481
singlet/doubletdoublet
Overlap genenone
Upstream geneTmprss7, Tagln3, Abhd10, Phldb2, EG667418, Plcxd2, 4930546O09Rik, Cd96, AL024110, Pvrl3
Downstream geneLOC628757, LOC628776
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-231J05.bB6Ng01-231J05.g
ACCGA044140GA044141
length1,0871,181
definitionB6Ng01-231J05.b B6Ng01-231J05.g
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(46,673,790 - 46,674,861)(46,831,310 - 46,832,481)
sequence
gaattccagtccttttcatcatgttctctatccatcctttcttcatcctc
tccccttcccctctccttttctttcatcctctgtcctcccttcccaaccc
tccttccaatcctcccttttgctcctccttccttctgttctttgcatttc
ttttcatttatggttctgctctcaaaacataacatcttttaacatacttc
ctttaagaatcatgagacgaaagcatgccttattttctattcattcattt
taattgatttatgtgcagcatgtggaacagttgctcaatgtattactgct
gccagatgaatgaataaagaagcaaaactatttcgttcatttagaatcta
tagtgtttactctgagttcataatataatatctgaacataatagcttatg
ttcaaaaataaaaaaaattccatattgaagcaaactgggtattctcaaaa
tggaatgcagttccgcaagtgttgtgagccaattttgagtactacttcct
ctatccaattttaaatttatacatgacatgaatcaaaagtatggagaatt
aaacttttttttgcttttatattgatatatctgatattgctgaacttgac
tttgactgcaggtgctctgtttgctaagaggaaacacacaaatggacaga
gtcacctgtttctacaaggcagagatgtatcacacagttgcattcatgct
gaaagcctgaagtacggagggaggaaggaggctgtatacggtgtgcctga
atttgacagagaaagatgcccattggagcactgccaggtttttcttccca
aagttagcatttgacaatgtctccttctagtagggaatagcagaggtgat
ggagtggctggggatgtagtacaggtgaacatctcttttcacaaggaaga
aagaaaaatgggtgaggagtaggagtattttccctcatagctaagccaca
gatgatcagcatgacaatggaaaatcacacgtgatctgagaacaattcta
agggatggtcccaagggggaacagaataagcctggataaatggtgtggag
aagaattaccagtgcccttcaagcctgccagacatgg

gaattcaatgcccatacttgagaggaaaatttaaagaaaggagggaagga
aggaaggaaggaaggaaggaaggaaggaaggaaggaaggaaagacagaac
tggcctaaagacaggtacaaagctcacctcctttccatgccatcactaaa
actattcctgcagtaaaacctgcaccatgggtaacagtgagccccccttc
ccaatgagcactttcacaagactaagtggcaaaagtgaaaagaatagaaa
acaaccctgtctgtcacacaaaagtatttcaacatgtattaactgaggta
aagaaattaaacaaacaaaaatcccaaatccacacagataatgggagcaa
agcaagtaatttgagatggcatcgaagagtgtgttcatgactacaataag
tgctttcattgcatccagattcctaatgcaagaagacagcttaaaatggt
acagccggttgggcccttgggtaaaggtattcagggtttagcatcaatca
ttcttttgttcttggctcttaaaaaaggcagctgattggccacaatgtgt
ctcttccttctgttgctccatacatagcctactgtgactacagtcattct
atgcagtatatcctacttggtaaaccatgtgttgtggcccaaaataaaat
gcttcattagacatgtaaagtcaatttaacttcctaactaaagaaggaga
caagcaaaacagtgatttttaattcagttcttcacaagtgaagatgaaca
ccaataggatgtgcatttaagtcaaggtttgtcttttcgttagtttactt
taggctagactttgtggactaatggtttattttgggtggccactaagaga
gaagaggctagcgagggccaaatcaattgatccaaactagatcttctgca
tacaggaggcacatgcccagcctttggtgcttctaaacaaccatatctaa
ttcattgttttctatatatgccagaactttaaaattattgctgggggtgc
ccttgtatggttgcaggctggtaatgttacttctctgaagcctctgtgtg
tttaatctattatcctagcattcaacgagatttctctggagagctaccat
gattagacccatagatgggaccacattgaaacaaagaagccatgatctgt
gcaggatggcttaatgtagcagcattagaat
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr16_46673790_46674861
seq2: B6Ng01-231J05.b_45_1131

seq1  GAATTCCAGTCCTTTTCATCATGTTCTCTATCCATCCTTTCTTCATCCTC  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCCAGTCCTTTTCATCATGTTCTCTATCCATCCTTTCTTCATCCTC  50

seq1  TCCCCTTCCCCTCTCCTTTTCTTTCATCCTCTGTCCTCCCTTCCCAACCC  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCCCTTCCCCTCTCCTTTTCTTTCATCCTCTGTCCTCCCTTCCCAACCC  100

seq1  TCCTTCCAATCCTCCCTTTTGCTCCTCCTTCCTTCTGTTCTTTGCATTTC  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCTTCCAATCCTCCCTTTTGCTCCTCCTTCCTTCTGTTCTTTGCATTTC  150

seq1  TTTTCATTTATGGTTCTGCTCTCAAAACATAACATCTTTTAACATACTTC  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTTCATTTATGGTTCTGCTCTCAAAACATAACATCTTTTAACATACTTC  200

seq1  CTTTAAGAATCATGAGACGAAAGCATGCCTTATTTTCTATTCATTCATTT  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTTAAGAATCATGAGACGAAAGCATGCCTTATTTTCTATTCATTCATTT  250

seq1  TAATTGATTTATGTGCAGCATGTGGAACAGTTGCTCAATGTATTACTGCT  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAATTGATTTATGTGCAGCATGTGGAACAGTTGCTCAATGTATTACTGCT  300

seq1  GCCAGATGAATGAATAAAGAAGCAAAACTATTTCGTTCATTTAGAATCTA  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCCAGATGAATGAATAAAGAAGCAAAACTATTTCGTTCATTTAGAATCTA  350

seq1  TAGTGTTTACTCTGAGTTCATAATATAATATCTGAACATAATAGCTTATG  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAGTGTTTACTCTGAGTTCATAATATAATATCTGAACATAATAGCTTATG  400

seq1  TTCAAAAATAAAAAAAATTCCATATTGAAGCAAACTGGGTATTCTCAAAA  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCAAAAATAAAAAAAATTCCATATTGAAGCAAACTGGGTATTCTCAAAA  450

seq1  TGGAATGCAGTTCCGCAAGTGTTGTGAGCCAATTTTGAGTACTACTTCCT  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGAATGCAGTTCCGCAAGTGTTGTGAGCCAATTTTGAGTACTACTTCCT  500

seq1  CTATCCAATTTTAAATTTATACATGACATGAATCAAAAGTATGGAGAATT  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTATCCAATTTTAAATTTATACATGACATGAATCAAAAGTATGGAGAATT  550

seq1  AAACTTTTTTTTGCTTTTATATTGATATATCTGATATTGCTGAACTTGAC  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAACTTTTTTTTGCTTTTATATTGATATATCTGATATTGCTGAACTTGAC  600

seq1  TTTGACTGCAGGTGCTCTGTTTGCTAAGAGGAAACACACAAATGGACAGA  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTGACTGCAGGTGCTCTGTTTGCTAAGAGGAAACACACAAATGGACAGA  650

seq1  GTCACCTGTTTCTACAAGGCAGAGATGTATCACACAGTTGCATTCATGCT  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTCACCTGTTTCTACAAGGCAGAGATGTATCACACAGTTGCATTCATGCT  700

seq1  GAAAGCCTGAAGTACGGAGGGAGGAAGGAGGCTGTATACGGTGTGCCTGA  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAAAGCCTGAAGTACGGAGGGAGGAAGGAGGCTGTATACGGTGTGCCTGA  750

seq1  ATTTGACAGAGAAAGATGCCCATTGGAGCACTGCCAGGTTTTTCTTCCCA  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTTGACAGAGAAAGATGCCCATTGGAGCACTGCCAGGTTTTTCTTCCCA  800

seq1  AAGTTAGCATTTGACAATGTCTCCTTCTAGTAGGGAATAGCAGAGGTGAT  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGTTAGCATTTGACAATGTCTCCTTCTAGTAGGGAATAGCAGAGGTGAT  850

seq1  GGAGTGGCTGGGGATGTAGTACAGGTGAACATCTCTTTTCACAAGGAAGA  900
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGAGTGGCTGGGGATGTAGTACAGGTGAACATCTCTTTTCACAAGGAAGA  900

seq1  AAGAAAAATGGGTGAGGAGTAGGAGTATTTTCCCTCATAGCTAAGCCACA  950
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGAAAAATGGGTGAGGAGTAGGAGTATTTTCCCTCATAGCTAAGCCACA  950

seq1  GATGATCAGCATGACAATGG-AAATCACACGTGATCTGAG-ACAA-TCTA  997
      |||||||||||||||||||| ||||||||||||||||||| |||| ||||
seq2  GATGATCAGCATGACAATGGAAAATCACACGTGATCTGAGAACAATTCTA  1000

seq1  A-GGATTGTCCCA--GGGGGACAGAA-GAGCCTG--AGAATGGTGT-GAG  1040
      | |||| ||||||  |||| ||||||  ||||||    |||||||| |||
seq2  AGGGATGGTCCCAAGGGGGAACAGAATAAGCCTGGATAAATGGTGTGGAG  1050

seq1  A--GACTACCAGTGCC--TCAGAGCTGCCAG-CATGG  1072
      |   | ||||||||||  |||   ||||||| |||||
seq2  AAGAATTACCAGTGCCCTTCAAGCCTGCCAGACATGG  1087


seq1: chr16_46831310_46832481
seq2: B6Ng01-231J05.g_68_1248 (reverse)

seq1  ATTCTAAATGCTGCTACATATAGCCATCCTGCACAGATCATGGCTTCTTT  50
      ||||| |||||||||||||  |||||||||||||||||||||||||||||
seq2  ATTCT-AATGCTGCTACATTAAGCCATCCTGCACAGATCATGGCTTCTTT  49

seq1  GTTTTCAATGT-GTCCAATTCTTATTGGTCTAATCAT-GTAGCTCT-CAG  97
      | ||||||||| |||| ||   ||| ||||||||||| |||||||| |||
seq2  G-TTTCAATGTGGTCCCAT--CTATGGGTCTAATCATGGTAGCTCTCCAG  96

seq1  AGAAATCTCG-TGAATGCTAGGAT-ATAGAT---AAACACAGA-GCTTCA  141
      |||||||||| ||||||||||||| ||||||   | ||||||| ||||||
seq2  AGAAATCTCGTTGAATGCTAGGATAATAGATTAAACACACAGAGGCTTCA  146

seq1  GAGAAGTAACATTACCAGCCTGCAACCATAC-AGGGCA-CCCCAGC-ATA  188
      ||||||||||||||||||||||||||||||| |||||| ||||||| |||
seq2  GAGAAGTAACATTACCAGCCTGCAACCATACAAGGGCACCCCCAGCAATA  196

seq1  ATTTTAAAGGTCTGGCATATATAGAAAACAATGAATTAGATATGGTTGTT  238
      ||||||||| ||||||||||||||||||||||||||||||||||||||||
seq2  ATTTTAAAGTTCTGGCATATATAGAAAACAATGAATTAGATATGGTTGTT  246

seq1  TAG-AGCACCAAAGGCTGGGCATGTGCCTCCTGTATGCAGAAGATCTAGT  287
      ||| ||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAGAAGCACCAAAGGCTGGGCATGTGCCTCCTGTATGCAGAAGATCTAGT  296

seq1  TTGGATCAATTGATTTGGCCCTCGCTAGCCTCTTCTCTCTTAGTGGCCAC  337
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGGATCAATTGATTTGGCCCTCGCTAGCCTCTTCTCTCTTAGTGGCCAC  346

seq1  CCAAAATAAACCATTAGTCCACAAAGTCTAGCCTAAAGTAAACTAACGAA  387
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCAAAATAAACCATTAGTCCACAAAGTCTAGCCTAAAGTAAACTAACGAA  396

seq1  AAGACAAACCTTGACTTAAATGCACATCCTATTGGTGTTCATCTTCACTT  437
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGACAAACCTTGACTTAAATGCACATCCTATTGGTGTTCATCTTCACTT  446

seq1  GTGAAGAACTGAATTAAAAATCACTGTTTTGCTTGTCTCCTTCTTTAGTT  487
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTGAAGAACTGAATTAAAAATCACTGTTTTGCTTGTCTCCTTCTTTAGTT  496

seq1  AGGAAGTTAAATTGACTTTACATGTCTAATGAAGCATTTTATTTTGGGCC  537
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGAAGTTAAATTGACTTTACATGTCTAATGAAGCATTTTATTTTGGGCC  546

seq1  ACAACACATGGTTTACCAAGTAGGATATACTGCATAGAATGACTGTAGTC  587
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACAACACATGGTTTACCAAGTAGGATATACTGCATAGAATGACTGTAGTC  596

seq1  ACAGTAGGCTATGTATGGAGCAACAGAAGGAAGAGACACATTGTGGCCAA  637
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACAGTAGGCTATGTATGGAGCAACAGAAGGAAGAGACACATTGTGGCCAA  646

seq1  TCAGCTGCCTTTTTTAAGAGCCAAGAACAAAAGAATGATTGATGCTAAAC  687
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCAGCTGCCTTTTTTAAGAGCCAAGAACAAAAGAATGATTGATGCTAAAC  696

seq1  CCTGAATACCTTTACCCAAGGGCCCAACCGGCTGTACCATTTTAAGCTGT  737
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTGAATACCTTTACCCAAGGGCCCAACCGGCTGTACCATTTTAAGCTGT  746

seq1  CTTCTTGCATTAGGAATCTGGATGCAATGAAAGCACTTATTGTAGTCATG  787
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTCTTGCATTAGGAATCTGGATGCAATGAAAGCACTTATTGTAGTCATG  796

seq1  AACACACTCTTCGATGCCATCTCAAATTACTTGCTTTGCTCCCATTATCT  837
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACACACTCTTCGATGCCATCTCAAATTACTTGCTTTGCTCCCATTATCT  846

seq1  GTGTGGATTTGGGATTTTTGTTTGTTTAATTTCTTTACCTCAGTTAATAC  887
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTGTGGATTTGGGATTTTTGTTTGTTTAATTTCTTTACCTCAGTTAATAC  896

seq1  ATGTTGAAATACTTTTGTGTGACAGACAGGGTTGTTTTCTATTCTTTTCA  937
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGTTGAAATACTTTTGTGTGACAGACAGGGTTGTTTTCTATTCTTTTCA  946

seq1  CTTTTGCCACTTAGTCTTGTGAAAGTGCTCATTGGGAAGGGGGGCTCACT  987
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTTTGCCACTTAGTCTTGTGAAAGTGCTCATTGGGAAGGGGGGCTCACT  996

seq1  GTTACCCATGGTGCAGGTTTTACTGCAGGAATAGTTTTAGTGATGGCATG  1037
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTACCCATGGTGCAGGTTTTACTGCAGGAATAGTTTTAGTGATGGCATG  1046

seq1  GAAAGGAGGTGAGCTTTGTACCTGTCTTTAGGCCAGTTCTGTCTTTCCTT  1087
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAAAGGAGGTGAGCTTTGTACCTGTCTTTAGGCCAGTTCTGTCTTTCCTT  1096

seq1  CCTTCCTTCCTTCCTTCCTTCCTTCCTTCCTTCCTTCCTTCCCTCCTTTC  1137
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTTCCTTCCTTCCTTCCTTCCTTCCTTCCTTCCTTCCTTCCCTCCTTTC  1146

seq1  TTTAAATTTTCCTCTCAAGTATGGGCATTGAATTC  1172
      |||||||||||||||||||||||||||||||||||
seq2  TTTAAATTTTCCTCTCAAGTATGGGCATTGAATTC  1181


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