BAC Information

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BAC

Clone NameB6Ng01-234M19
Chromosome16 (Build37)
Map Location 7,456,401 - 7,607,794
singlet/doubletdoublet
Overlap genenone
Upstream geneA2bp1
Downstream gene4930511J11Rik, BC024814, Abat
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-234M19.bB6Ng01-234M19.g
ACCGA046456GA046457
length655346
definitionB6Ng01-234M19.b B6Ng01-234M19.g
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(7,456,401 - 7,457,055)(7,607,449 - 7,607,794)
sequence
gaattcagccaatgaacgagtcaaaataattgagccaaatagttgcaggt
aggagaaaatgtcatgaggagtcacagtagcatcatgtgacaaaggtggc
tcagcaccaaacagggcagtttggctgttcattaagtatatggtacccaa
ttgataaaagacatacattttaataaggatggcagtgtctcccaccaatc
ttttggaattatgggaagaaatatactaaataactgatttgagaaaacca
aactatttttattataatttacttctcaattctcctttgtacctggagct
gttctcaaatggtggagatgtatacattgtgcatgggttttatttcagaa
atgtaaaacaggagttggaaattatttcgaatgtgaggagcattgggtct
gagaagcctgaaacactctggcctggacttctgtagccagatccatattg
tagttggcagtgttgtgtcatgatctacccttaggattaaaattataaat
ttgggccaattggaggactcagtgggtaaaggctcttgctgaccccaagg
tctccatgataaaaggggagaagtgatccctgtgcgtcttctgacttcca
tgcttgtactgtgtgtgtgtgtgtgtgtctgtgtgtgtatgtatgtgtgt
gtgtc

ctgtatcctttgaactttaaaagaatatagagaaatatctttagttaatg
ttgtagcctattcccttgatcttagctaacagtctctttagaaaaggcca
tttctttgagagtggccattggcagagcatgatcatcccacaccactgca
caataaaaacagtggagcttaaggaagggacagcgtgtgatggggtgacc
tgaaaaggttagtgaaaatgaggacattgaacctgaaaggaaatgggcta
ttctagttaaaacagagacccaggctagccagaattgaggaagaggagga
ggaagaagaagagagggaggaagaagaggaggaggaggaggaaatt
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr16_7456401_7457055
seq2: B6Ng01-234M19.b_48_702

seq1  GAATTCAGCCAATGAACGAGTCAAAATAATTGAGCCAAATAGTTGCAGGT  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCAGCCAATGAACGAGTCAAAATAATTGAGCCAAATAGTTGCAGGT  50

seq1  AGGAGAAAATGTCATGAGGAGTCACAGTAGCATCATGTGACAAAGGTGGC  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGAGAAAATGTCATGAGGAGTCACAGTAGCATCATGTGACAAAGGTGGC  100

seq1  TCAGCACCAAACAGGGCAGTTTGGCTGTTCATTAAGTATATGGTACCCAA  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCAGCACCAAACAGGGCAGTTTGGCTGTTCATTAAGTATATGGTACCCAA  150

seq1  TTGATAAAAGACATACATTTTAATAAGGATGGCAGTGTCTCCCACCAATC  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGATAAAAGACATACATTTTAATAAGGATGGCAGTGTCTCCCACCAATC  200

seq1  TTTTGGAATTATGGGAAGAAATATACTAAATAACTGATTTGAGAAAACCA  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTTGGAATTATGGGAAGAAATATACTAAATAACTGATTTGAGAAAACCA  250

seq1  AACTATTTTTATTATAATTTACTTCTCAATTCTCCTTTGTACCTGGAGCT  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACTATTTTTATTATAATTTACTTCTCAATTCTCCTTTGTACCTGGAGCT  300

seq1  GTTCTCAAATGGTGGAGATGTATACATTGTGCATGGGTTTTATTTCAGAA  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTCTCAAATGGTGGAGATGTATACATTGTGCATGGGTTTTATTTCAGAA  350

seq1  ATGTAAAACAGGAGTTGGAAATTATTTCGAATGTGAGGAGCATTGGGTCT  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGTAAAACAGGAGTTGGAAATTATTTCGAATGTGAGGAGCATTGGGTCT  400

seq1  GAGAAGCCTGAAACACTCTGGCCTGGACTTCTGTAGCCAGATCCATATTG  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGAAGCCTGAAACACTCTGGCCTGGACTTCTGTAGCCAGATCCATATTG  450

seq1  TAGTTGGCAGTGTTGTGTCATGATCTACCCTTAGGATTAAAATTATAAAT  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAGTTGGCAGTGTTGTGTCATGATCTACCCTTAGGATTAAAATTATAAAT  500

seq1  TTGGGCCAATTGGAGGACTCAGTGGGTAAAGGCTCTTGCTGACCCCAAGG  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGGGCCAATTGGAGGACTCAGTGGGTAAAGGCTCTTGCTGACCCCAAGG  550

seq1  TCTCCATGATAAAAGGGGAGAAGTGATCCCTGTGCGTCTTCTGACTTCCA  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTCCATGATAAAAGGGGAGAAGTGATCCCTGTGCGTCTTCTGACTTCCA  600

seq1  TGCTTGTACTGTGTGTGTGTGTGTGTGTCTGTGTGTGTATGTATGTGTGT  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGCTTGTACTGTGTGTGTGTGTGTGTGTCTGTGTGTGTATGTATGTGTGT  650

seq1  GTGTC  655
      |||||
seq2  GTGTC  655


seq1: chr16_7607449_7607794
seq2: B6Ng01-234M19.g_71_416 (reverse)

seq1  AATTTCCTCCTCCTCCTCCTCTTCTTCCTCCCTCTCTTCTTCTTCCTCCT  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATTTCCTCCTCCTCCTCCTCTTCTTCCTCCCTCTCTTCTTCTTCCTCCT  50

seq1  CCTCTTCCTCAATTCTGGCTAGCCTGGGTCTCTGTTTTAACTAGAATAGC  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTCTTCCTCAATTCTGGCTAGCCTGGGTCTCTGTTTTAACTAGAATAGC  100

seq1  CCATTTCCTTTCAGGTTCAATGTCCTCATTTTCACTAACCTTTTCAGGTC  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCATTTCCTTTCAGGTTCAATGTCCTCATTTTCACTAACCTTTTCAGGTC  150

seq1  ACCCCATCACACGCTGTCCCTTCCTTAAGCTCCACTGTTTTTATTGTGCA  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACCCCATCACACGCTGTCCCTTCCTTAAGCTCCACTGTTTTTATTGTGCA  200

seq1  GTGGTGTGGGATGATCATGCTCTGCCAATGGCCACTCTCAAAGAAATGGC  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTGGTGTGGGATGATCATGCTCTGCCAATGGCCACTCTCAAAGAAATGGC  250

seq1  CTTTTCTAAAGAGACTGTTAGCTAAGATCAAGGGAATAGGCTACAACATT  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTTTCTAAAGAGACTGTTAGCTAAGATCAAGGGAATAGGCTACAACATT  300

seq1  AACTAAAGATATTTCTCTATATTCTTTTAAAGTTCAAAGGATACAG  346
      ||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACTAAAGATATTTCTCTATATTCTTTTAAAGTTCAAAGGATACAG  346


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