BAC Information

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BAC

Clone NameB6Ng01-237B18
Chromosome16 (Build37)
Map Location 13,714,474 - 13,809,616
singlet/doubletdoublet
Overlap genePla2g10, A930007A09Rik, LOC622757, Rrn3
Upstream geneEG622509, LOC622553, Ercc4, Gt4-1, Mkl2, Parn, LOC100043196, 3110001I22Rik
Downstream geneNtan1, Pdxdc1, Mpv17l, Ifitm7, 2900011O08Rik, 4921513D23Rik, Nde1, Myh11, 0610037P05Rik, Abcc1, Gm1758, Snai2
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-237B18.bB6Ng01-237B18.g
ACCGA048158GA048159
length1,1241,020
definitionB6Ng01-237B18.b B6Ng01-237B18.g
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(13,808,490 - 13,809,616)(13,714,474 - 13,715,486)
sequence
gaattcattgctgcattcagaatctttaccatcgtcaacgtgcttcctga
gagccatactcactcacttatcccaaccctgacctatcacggtctcccca
gtttgctctgtcactaatacctgtctccctagaataaggatctgcggctt
agttagacctggcagcacacgagtttgcctgtttagtattagtttgtcca
ttaagatttcgagtgccgaggctgcgctgggtacaagcagaactccagtg
tcactaaagaatacaatacgtggctggctatggtactcttgcaataacag
cattgctggtttcttcatatgcactgctcctgagaatgtactggaattta
ctcagtgccaaagcgaaagaacggcatccagcaccaagctccaccccctt
gacttttagatgtccataaaggaaacaactcactttgtgatagcagcaaa
gaaattaaccacttgcggcaggcagatcttcagtgggttcagctggctca
acacaatgcgctcaaaatttagactctgaagatactgtagacctttgatt
aaaaaaaaaagaggggttaagatacctttaaaagcacaaattattacata
tgcaaaaacccaatttaagggctctgtggcagggcggatgcttagggtgg
gcttgagctctagcacaccacgtcccagaataaagacattataaacaagt
tactggcagcaacgcacgagtaaagctcaaggcctgctgccatacagtac
aaccttctgaaaagagaagccagttcctcttgggtaacagattacacagc
aacctgcaatcagtatctgcgggctcagagagggctgagggcacacagga
gagagaccacaggagctcgcctcctaacgggcaccaaggacagtccaggt
cacgtgtgctttcttagcagcgcagccctgcaacactctaaaggatgcca
gttactgactgtactttcctccctctccctcagtcaccctagtgatttcc
tttcctacaaggagccctagcccaggctgagtagacggatgaatggagcc
acctgggctccatagtgaaactactcaaaaatatttttttttaataaatg
tagattctagttactatttgatcc
gaattcccaaagacaaaggttctgatgccagtgacagaatggacttagca
tcttgagtgagggcaagcaagccaagagcaaaggcttccttctgccattc
taaagctttggaatgatctctctctaaaaatattttgattgtgggatgtg
tgtgtgtgtgtgtgtgtgtgtgtgtgtgtatacacgtgtttactcgagca
cacacttgtgcaagtaagcatgtgcagacacgtacttgcagaagccagat
atgtcacattctttggaaccagagcaaaagcagttgagccgaacaatatg
caggccagaaactgcactcaggttccctgggagggcaggaagctctgcta
accactgagcatctttcctggcctgcgatttcagtttttagggtttgatc
tgttgttctacattttttttttaattttttccttgaaatgttgggactca
aactcaggaccttaaacacgcttcacaaatgttttgacacacagcagtac
caccagcccaggaaagaattttctttttctttgagaaagtctctcttgcc
tacactggtaccagcctcctgggctcagctgacctttcaacctcagcaga
acaccccagcagacatcccaggagtgtgccaccacacccagcttccggga
aataaaatttacctcttacacaaggagccagttagggacatttttttata
cagttacaattcttagatgtatcatgtgggcaatgttattaccacagcca
agcctaagcaggtgttcacccacatctgaccagcagcccctgcagcaggt
acaagatagtacagcttctcataaggctgaatttcaaaaagtatacacgc
ccaacacagtgcctatttgtataaaacagcccaggactttgaacctttca
tcagactggcaacttccacaggctcatagttgtgaggttccttgaatgga
acgaagaaagcaaacgcatgtggccatttagcacttgggctttcggtgac
tttctggcacaaaattgcat
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr16_13808490_13809616
seq2: B6Ng01-237B18.b_42_1165 (reverse)

seq1  GGATCAAAATAGTAACTAG-ATCTACATTTTATTTAAAAAAATATTTTTT  49
      ||||| ||||||||||||| ||||||| |||||| |||||||   |||||
seq2  GGATC-AAATAGTAACTAGAATCTACA-TTTATTAAAAAAAAATATTTTT  48

seq1  GAGGTAGTTTCACTATGGAGCCCAGGTTGGCTTCCATTCATCCCGTCTAC  99
      || ||||||||||||||||||||||| |||| ||||||||| ||||||| 
seq2  GA-GTAGTTTCACTATGGAGCCCAGG-TGGC-TCCATTCAT-CCGTCTA-  93

seq1  CTCAGCCTGGGCTAGGGCTCCCTTGTAGG-AAGGAATTCACTAGGGTGAC  148
      ||||||||||||||||||| ||||||||| |||||| |||||||||||||
seq2  CTCAGCCTGGGCTAGGGCT-CCTTGTAGGAAAGGAAATCACTAGGGTGAC  142

seq1  TGAGGGAGAGGGAGG-AAGTACAGTCAGTAACTGGCATCC-TTAGAGTGT  196
      ||||||||||||||| |||||||||||||||||||||||| |||||||||
seq2  TGAGGGAGAGGGAGGAAAGTACAGTCAGTAACTGGCATCCTTTAGAGTGT  192

seq1  TGCAGGGCTGCGCTGCTAAG-AAGCACACGTGACCTGGACTGTCCTTGGT  245
      |||||||||||||||||||| |||||||||||||||||||||||||||||
seq2  TGCAGGGCTGCGCTGCTAAGAAAGCACACGTGACCTGGACTGTCCTTGGT  242

seq1  GCCCGTTAGGAGGCGAGCTCCTGTGGTCTCTCTCCTGTGTGCCCTCAGCC  295
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCCCGTTAGGAGGCGAGCTCCTGTGGTCTCTCTCCTGTGTGCCCTCAGCC  292

seq1  CTCTCTGAGCCCGCAGATACTGATTGCAGGTTGCTGTGTAATCTGTTACC  345
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCTCTGAGCCCGCAGATACTGATTGCAGGTTGCTGTGTAATCTGTTACC  342

seq1  CAAGAGGAACTGGCTTCTCTTTTCAGAAGGTTGTACTGTATGGCAGCAGG  395
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAAGAGGAACTGGCTTCTCTTTTCAGAAGGTTGTACTGTATGGCAGCAGG  392

seq1  CCTTGAGCTTTACTCGTGCGTTGCTGCCAGTAACTTGTTTATAATGTCTT  445
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTTGAGCTTTACTCGTGCGTTGCTGCCAGTAACTTGTTTATAATGTCTT  442

seq1  TATTCTGGGACGTGGTGTGCTAGAGCTCAAGCCCACCCTAAGCATCCGCC  495
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATTCTGGGACGTGGTGTGCTAGAGCTCAAGCCCACCCTAAGCATCCGCC  492

seq1  CTGCCACAGAGCCCTTAAATTGGGTTTTTGCATATGTAATAATTTGTGCT  545
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGCCACAGAGCCCTTAAATTGGGTTTTTGCATATGTAATAATTTGTGCT  542

seq1  TTTAAAGGTATCTTAACCCCTCTTTTTTTTTTAATCAAAGGTCTACAGTA  595
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTAAAGGTATCTTAACCCCTCTTTTTTTTTTAATCAAAGGTCTACAGTA  592

seq1  TCTTCAGAGTCTAAATTTTGAGCGCATTGTGTTGAGCCAGCTGAACCCAC  645
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTTCAGAGTCTAAATTTTGAGCGCATTGTGTTGAGCCAGCTGAACCCAC  642

seq1  TGAAGATCTGCCTGCCGCAAGTGGTTAATTTCTTTGCTGCTATCACAAAG  695
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGAAGATCTGCCTGCCGCAAGTGGTTAATTTCTTTGCTGCTATCACAAAG  692

seq1  TGAGTTGTTTCCTTTATGGACATCTAAAAGTCAAGGGGGTGGAGCTTGGT  745
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGAGTTGTTTCCTTTATGGACATCTAAAAGTCAAGGGGGTGGAGCTTGGT  742

seq1  GCTGGATGCCGTTCTTTCGCTTTGGCACTGAGTAAATTCCAGTACATTCT  795
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCTGGATGCCGTTCTTTCGCTTTGGCACTGAGTAAATTCCAGTACATTCT  792

seq1  CAGGAGCAGTGCATATGAAGAAACCAGCAATGCTGTTATTGCAAGAGTAC  845
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGGAGCAGTGCATATGAAGAAACCAGCAATGCTGTTATTGCAAGAGTAC  842

seq1  CATAGCCAGCCACGTATTGTATTCTTTAGTGACACTGGAGTTCTGCTTGT  895
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATAGCCAGCCACGTATTGTATTCTTTAGTGACACTGGAGTTCTGCTTGT  892

seq1  ACCCAGCGCAGCCTCGGCACTCGAAATCTTAATGGACAAACTAATACTAA  945
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACCCAGCGCAGCCTCGGCACTCGAAATCTTAATGGACAAACTAATACTAA  942

seq1  ACAGGCAAACTCGTGTGCTGCCAGGTCTAACTAAGCCGCAGATCCTTATT  995
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACAGGCAAACTCGTGTGCTGCCAGGTCTAACTAAGCCGCAGATCCTTATT  992

seq1  CTAGGGAGACAGGTATTAGTGACAGAGCAAACTGGGGAGACCGTGATAGG  1045
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTAGGGAGACAGGTATTAGTGACAGAGCAAACTGGGGAGACCGTGATAGG  1042

seq1  TCAGGGTTGGGATAAGTGAGTGAGTATGGCTCTCAGGAAGCACGTTGACG  1095
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCAGGGTTGGGATAAGTGAGTGAGTATGGCTCTCAGGAAGCACGTTGACG  1092

seq1  ATGGTAAAGATTCTGAATGCAGCAATGAATTC  1127
      ||||||||||||||||||||||||||||||||
seq2  ATGGTAAAGATTCTGAATGCAGCAATGAATTC  1124

seq1: chr16_13714474_13715486
seq2: B6Ng01-237B18.g_67_1086

seq1  GAATTCCCAAAGACAAAGGTTCTGATGCCAGTGACAGAATGGACTTAGCA  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCCCAAAGACAAAGGTTCTGATGCCAGTGACAGAATGGACTTAGCA  50

seq1  TCTTGAGTGAGGGCAAGCAAGCCAAGAGCAAAGGCTTCCTTCTGCCATTC  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTTGAGTGAGGGCAAGCAAGCCAAGAGCAAAGGCTTCCTTCTGCCATTC  100

seq1  TAAAGCTTTGGAATGATCTCTCTCTAAAAATATTTTGATTGTGGGATGTG  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAAAGCTTTGGAATGATCTCTCTCTAAAAATATTTTGATTGTGGGATGTG  150

seq1  TGTGTGTGTGTGTGTGTGTGTGTGTGTGTATACACGTGTTTACTCGAGCA  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTGTGTGTGTGTGTGTGTGTGTGTGTGTATACACGTGTTTACTCGAGCA  200

seq1  CACACTTGTGCAAGTAAGCATGTGCAGACACGTACTTGCAGAAGCCAGAT  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACACTTGTGCAAGTAAGCATGTGCAGACACGTACTTGCAGAAGCCAGAT  250

seq1  ATGTCACATTCTTTGGAACCAGAGCAAAAGCAGTTGAGCCGAACAATATG  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGTCACATTCTTTGGAACCAGAGCAAAAGCAGTTGAGCCGAACAATATG  300

seq1  CAGGCCAGAAACTGCACTCAGGTTCCCTGGGAGGGCAGGAAGCTCTGCTA  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGGCCAGAAACTGCACTCAGGTTCCCTGGGAGGGCAGGAAGCTCTGCTA  350

seq1  ACCACTGAGCATCTTTCCTGGCCTGCGATTTCAGTTTTTAGGGTTTGATC  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACCACTGAGCATCTTTCCTGGCCTGCGATTTCAGTTTTTAGGGTTTGATC  400

seq1  TGTTGTTCTACATTTTTTTTTTAATTTTTTCCTTGAAATGTTGGGACTCA  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTTGTTCTACATTTTTTTTTTAATTTTTTCCTTGAAATGTTGGGACTCA  450

seq1  AACTCAGGACCTTAAACACGCTTCACAAATGTTTTGACACACAGCAGTAC  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACTCAGGACCTTAAACACGCTTCACAAATGTTTTGACACACAGCAGTAC  500

seq1  CACCAGCCCAGGAAAGAATTTTCTTTTTCTTTGAGAAAGTCTCTCTTGCC  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACCAGCCCAGGAAAGAATTTTCTTTTTCTTTGAGAAAGTCTCTCTTGCC  550

seq1  TACACTGGTACCAGCCTCCTGGGCTCAGCTGACCTTTCAACCTCAGCAGA  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TACACTGGTACCAGCCTCCTGGGCTCAGCTGACCTTTCAACCTCAGCAGA  600

seq1  ACACCCCAGCAGACATCCCAGGAGTGTGCCACCACACCCAGCTTCCGGGA  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACACCCCAGCAGACATCCCAGGAGTGTGCCACCACACCCAGCTTCCGGGA  650

seq1  AATAAAATTTACCTCTTACACAAGGAGCCAGTTAGGGAACATTTTTTTAT  700
      ||||||||||||||||||||||||||||||||||||| ||||||||||| 
seq2  AATAAAATTTACCTCTTACACAAGGAGCCAGTTAGGG-ACATTTTTTTA-  698

seq1  TACAGTTACAATTCTTAGATGTATCATGT-GGCAATGTTATTACCACAGC  749
      ||||||||||||||||||||||||||||| ||||||||||||||||||||
seq2  TACAGTTACAATTCTTAGATGTATCATGTGGGCAATGTTATTACCACAGC  748

seq1  CAAGCCTAAGCAGGTGTTCACCCACATCTGACCAGCAG-CCCTGCAGCAG  798
      |||||||||||||||||||||||||||||||||||||| |||||||||||
seq2  CAAGCCTAAGCAGGTGTTCACCCACATCTGACCAGCAGCCCCTGCAGCAG  798

seq1  GTACAAGATAGTACAGCTTCTCATAAAGGCTGAATTTCAAAAAGTATACC  848
      |||||||||||||||||||||||| ||||||||||||||||||||||| |
seq2  GTACAAGATAGTACAGCTTCTCAT-AAGGCTGAATTTCAAAAAGTATA-C  846

seq1  ACGCCCAACACAGCG-CTATTTGTATAAAACAGGCCCAGGACTTTGAACC  897
      ||||||||||||| | |||||||||||||||| |||||||||||||||||
seq2  ACGCCCAACACAGTGCCTATTTGTATAAAACA-GCCCAGGACTTTGAACC  895

seq1  -TTCATCAGACTGGCAAC-TCCACAGGCTCATAGTTGTGA-GTTCC-TGA  943
       ||||||||||||||||| ||||||||||||||||||||| ||||| |||
seq2  TTTCATCAGACTGGCAACTTCCACAGGCTCATAGTTGTGAGGTTCCTTGA  945

seq1  ATGGAA-GGAGAAAGCAAACGCAGGTGGC--TTTAGCACTT-GGCCTCCG  989
      |||||| | |||||||||||||| |||||  |||||||||| ||| | ||
seq2  ATGGAACGAAGAAAGCAAACGCATGTGGCCATTTAGCACTTGGGCTTTCG  995

seq1  GTGACTCTCCTGCAC-AAATTGCAT  1013
      |||||| ||  |||| |||||||||
seq2  GTGACTTTCTGGCACAAAATTGCAT  1020