BAC Information

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BAC

Clone NameB6Ng01-237J06
Chromosome16 (Build37)
Map Location 70,778,505 - 70,911,030
singlet/doubletdoublet
Overlap genenone
Upstream geneSpeer2, EG664930, Gbe1, D16Ertd519e
Downstream geneLOC100039231
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-237J06.bB6Ng01-237J06.g
ACCGA048496GA048497
length1,1001,105
definitionB6Ng01-237J06.b B6Ng01-237J06.g
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(70,909,926 - 70,911,030)(70,778,505 - 70,779,630)
sequence
gaattcatatattttatttgaaactgatgaaatgtctgctgttaaataac
tatgcaattagttttctactgctagtatcttaagaacacatacaactcat
acctcaacaaagagccagcttgttctactcaacatgcatcgaacacttca
ataaaggtgttggagccgggtggtggtggcacacacttttaatcccagca
cttgagaggcagaggcaggcagatttctgagttcgagcccagcctagtct
acaaagtgagttccaggacagccagggctacacagagaaaccctgtcttg
aaaaaccaaaaataaataaataaataaataaataaaataaaaaggtgttg
gaaacaaactgatttttttcatcatttaaaaaacaagttgaaagttaaaa
aatttacagggagaattgttttcaagcccattaatttttatgactttaaa
gaatgaatagcttactcagtaatgcatattttttgttataacacaggcct
gtataataaacatctataaaatgtattgcaattataaaatacattattca
aatacttattgactaacactttgctttacaatagctgaaaataaaccaag
caactgctcagatagatcttaaaacaatttagtaatacataaaatcccat
ttgaattgccagctcctcgttactcggcaaatgcaacttattagactcat
ttatgcatttcctcattcagcaaatattcaataagcagatttgaagagca
aaatcctgtgctgggagttttgggagatacaaagataatctaatatctta
gtatggattttcattaagcttctttatgtgtatattaaagacataatatg
aagctgcaaactgcaagcacatgcgtttttgatgttgtgtcaataaagcg
cctggacaatgcgctgggaagcacttccttcagcagtttagagaccgggt
gtgaagccatgatccaaaggccaacagagaaagaggaaccgcttgagtta
gccacagttgacttctcactcatctttttgctctctcagtgatatttctc
acatatgacgctagtatctgggaaagaacattgtgccccacatggtctga


gaattctaaaaatggacagtttaaaattcgagttttgcctttgaggtttt
tctttttacttgctttctcaagtggcaaacaaaacaaaaacaacaataaa
agcaaacaaaaaacagcagcaacaacaacaagaacaaaaaacaaaataaa
aataaaataaaataagctcttacttccctcctgatttagtttgcaatttt
tttttttgacctaaccaaggacagttgaaataaatcaaaagttatctcac
tcacggatgatctaaagtaaataaacaaacaagcaagactaataattagg
caactcattgagtaggctggtgaaccagctaaactgggaaagaaattatt
caagttctaaacctttctacttgcaaattagccaaaatcaattgcagttt
aagttctgcatcaccttgattgattttaaaacggagcactttgccttcgc
atttgtggtgtgccctgaaggacttggcaatgggcttcttctccaccact
gtctgcatttaactttcagaatagctctgctccttaacacggagccaact
ttctagttttcttgtcttgagaagactcagtcgttaaacgactttccata
caaacagaatgggaattctgttcccaggagtcatgcaaaaactagacaag
cacggctaccgctctgaagcccagtgttgggaaggcagaggcaggcaatc
tcctggcaaactggctggacaagatgagctggcattagcaagctccagat
tcagcaaatgacaatgccccaacaaataaattagagaacaatcgagaaag
atacctgatacctactgtgtacctgtacacaggtgcacacatgtctatgc
actcccacaaatacatccacacttgtgcaaacatgcacacccatattctc
agcatatacatagtccaaagatagaaagggaaatacaggattgagatttc
actttgcaagtaacaaagttatcatcatcgacacaaaacatggtagctct
caaaagtagactattttcccctagaatattttatgattctgcagtattat
ttgagaagtatagtagccccatacaaattacagattgcatcattctgaag
ttttt
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr16_70909926_70911030
seq2: B6Ng01-237J06.b_43_1142 (reverse)

seq1  TCAGACCATGTGGGGCACAATGTTCTTTCCCAGATACTAGCGGTCATATG  50
      ||||||||||||||||||||||||||||||||||||||||| ||||||| 
seq2  TCAGACCATGTGGGGCACAATGTTCTTTCCCAGATACTAGC-GTCATAT-  48

seq1  GTGAGAAATATCACCTGGAGGAGAGCAAAAGATTGAGTGAGAAGTCAACT  100
      ||||||||||||| |||   ||||||||||   |||||||||||||||||
seq2  GTGAGAAATATCA-CTG--AGAGAGCAAAAAGATGAGTGAGAAGTCAACT  95

seq1  GTGGCTAACTCAAGCGGTTCCTCTTTCTCTG-TGGCCTTTGGATCATGGC  149
      ||||||||||||||||||||||||||||||| ||||||||||||||||||
seq2  GTGGCTAACTCAAGCGGTTCCTCTTTCTCTGTTGGCCTTTGGATCATGGC  145

seq1  TTCACACCCGGTCTCTAAACCTGCTGAAGGAAGTGCTTCCCAGCGCATTG  199
      ||||||||||||||||||| ||||||||||||||||||||||||||||||
seq2  TTCACACCCGGTCTCTAAA-CTGCTGAAGGAAGTGCTTCCCAGCGCATTG  194

seq1  TCCAGGCGCTTTATTGACACAACATCAAAAACGCATGTGCTTGCAGTTTG  249
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCAGGCGCTTTATTGACACAACATCAAAAACGCATGTGCTTGCAGTTTG  244

seq1  CAGCTTCATATTATGTCTTTAATATACACATAAAGAAGCTTAATGAAAAT  299
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGCTTCATATTATGTCTTTAATATACACATAAAGAAGCTTAATGAAAAT  294

seq1  CCATACTAAGATATTAGATTATCTTTGTATCTCCCAAAACTCCCAGCACA  349
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCATACTAAGATATTAGATTATCTTTGTATCTCCCAAAACTCCCAGCACA  344

seq1  GGATTTTGCTCTTCAAATCTGCTTATTGAATATTTGCTGAATGAGGAAAT  399
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGATTTTGCTCTTCAAATCTGCTTATTGAATATTTGCTGAATGAGGAAAT  394

seq1  GCATAAATGAGTCTAATAAGTTGCATTTGCCGAGTAACGAGGAGCTGGCA  449
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCATAAATGAGTCTAATAAGTTGCATTTGCCGAGTAACGAGGAGCTGGCA  444

seq1  ATTCAAATGGGATTTTATGTATTACTAAATTGTTTTAAGATCTATCTGAG  499
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTCAAATGGGATTTTATGTATTACTAAATTGTTTTAAGATCTATCTGAG  494

seq1  CAGTTGCTTGGTTTATTTTCAGCTATTGTAAAGCAAAGTGTTAGTCAATA  549
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGTTGCTTGGTTTATTTTCAGCTATTGTAAAGCAAAGTGTTAGTCAATA  544

seq1  AGTATTTGAATAATGTATTTTATAATTGCAATACATTTTATAGATGTTTA  599
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTATTTGAATAATGTATTTTATAATTGCAATACATTTTATAGATGTTTA  594

seq1  TTATACAGGCCTGTGTTATAACAAAAAATATGCATTACTGAGTAAGCTAT  649
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTATACAGGCCTGTGTTATAACAAAAAATATGCATTACTGAGTAAGCTAT  644

seq1  TCATTCTTTAAAGTCATAAAAATTAATGGGCTTGAAAACAATTCTCCCTG  699
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCATTCTTTAAAGTCATAAAAATTAATGGGCTTGAAAACAATTCTCCCTG  694

seq1  TAAATTTTTTAACTTTCAACTTGTTTTTTAAATGATGAAAAAAATCAGTT  749
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAAATTTTTTAACTTTCAACTTGTTTTTTAAATGATGAAAAAAATCAGTT  744

seq1  TGTTTCCAACACCTTTTTATTTTATTTATTTATTTATTTATTTATTTTTG  799
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTTTCCAACACCTTTTTATTTTATTTATTTATTTATTTATTTATTTTTG  794

seq1  GTTTTTCAAGACAGGGTTTCTCTGTGTAGCCCTGGCTGTCCTGGAACTCA  849
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTTTTCAAGACAGGGTTTCTCTGTGTAGCCCTGGCTGTCCTGGAACTCA  844

seq1  CTTTGTAGACTAGGCTGGGCTCGAACTCAGAAATCTGCCTGCCTCTGCCT  899
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTTGTAGACTAGGCTGGGCTCGAACTCAGAAATCTGCCTGCCTCTGCCT  894

seq1  CTCAAGTGCTGGGATTAAAAGTGTGTGCCACCACCACCCGGCTCCAACAC  949
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCAAGTGCTGGGATTAAAAGTGTGTGCCACCACCACCCGGCTCCAACAC  944

seq1  CTTTATTGAAGTGTTCGATGCATGTTGAGTAGAACAAGCTGGCTCTTTGT  999
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTTATTGAAGTGTTCGATGCATGTTGAGTAGAACAAGCTGGCTCTTTGT  994

seq1  TGAGGTATGAGTTGTATGTGTTCTTAAGATACTAGCAGTAGAAAACTAAT  1049
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGAGGTATGAGTTGTATGTGTTCTTAAGATACTAGCAGTAGAAAACTAAT  1044

seq1  TGCATAGTTATTTAACAGCAGACATTTCATCAGTTTCAAATAAAATATAT  1099
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGCATAGTTATTTAACAGCAGACATTTCATCAGTTTCAAATAAAATATAT  1094

seq1  GAATTC  1105
      ||||||
seq2  GAATTC  1100


seq1: chr16_70778505_70779630
seq2: B6Ng01-237J06.g_64_1168

seq1  GAATTCTAAAAATGGACAGTTTAAAATTCGAGTTTTGCCTTTGAGGTTTT  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCTAAAAATGGACAGTTTAAAATTCGAGTTTTGCCTTTGAGGTTTT  50

seq1  TCTTTTTACTTGCTTTCTCAAGTGGCAAACAAAACAAAAACAACAATAAA  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTTTTTACTTGCTTTCTCAAGTGGCAAACAAAACAAAAACAACAATAAA  100

seq1  AGCAAACAAAAAACAGCAGCAACAACAACAAGAACAAAAAACAAAATAAA  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGCAAACAAAAAACAGCAGCAACAACAACAAGAACAAAAAACAAAATAAA  150

seq1  AATAAAATAAAATAAGCTCTTACTTCCCTCCTGATTTAGTTTGCAATTTT  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATAAAATAAAATAAGCTCTTACTTCCCTCCTGATTTAGTTTGCAATTTT  200

seq1  TTTTTTTGACCTAACCAAGGACAGTTGAAATAAATCAAAAGTTATCTCAC  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTTTTTGACCTAACCAAGGACAGTTGAAATAAATCAAAAGTTATCTCAC  250

seq1  TCACGGATGATCTAAAGTAAATAAACAAACAAGCAAGACTAATAATTAGG  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCACGGATGATCTAAAGTAAATAAACAAACAAGCAAGACTAATAATTAGG  300

seq1  CAACTCATTGAGTAGGCTGGTGAACCAGCTAAACTGGGAAAGAAATTATT  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAACTCATTGAGTAGGCTGGTGAACCAGCTAAACTGGGAAAGAAATTATT  350

seq1  CAAGTTCTAAACCTTTCTACTTGCAAATTAGCCAAAATCAATTGCAGTTT  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAAGTTCTAAACCTTTCTACTTGCAAATTAGCCAAAATCAATTGCAGTTT  400

seq1  AAGTTCTGCATCACCTTGATTGATTTTAAAACGGAGCACTTTGCCTTCGC  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGTTCTGCATCACCTTGATTGATTTTAAAACGGAGCACTTTGCCTTCGC  450

seq1  ATTTGTGGTGTGCCCTGAAGGACTTGGCAATGGGCTTCTTCTCCACCACT  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTTGTGGTGTGCCCTGAAGGACTTGGCAATGGGCTTCTTCTCCACCACT  500

seq1  GTCTGCATTTAACTTTCAGAATAGCTCTGCTCCTTAACACGGAGCCAACT  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTCTGCATTTAACTTTCAGAATAGCTCTGCTCCTTAACACGGAGCCAACT  550

seq1  TTCTAGTTTTCTTGTCTTGAGAAGACTCAGTCGTTAAACGACTTTCCATA  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCTAGTTTTCTTGTCTTGAGAAGACTCAGTCGTTAAACGACTTTCCATA  600

seq1  CAAACAGAATGGGAATTCTGTTCCCAGGAGTCATGCAAAAACTAGACAAG  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAAACAGAATGGGAATTCTGTTCCCAGGAGTCATGCAAAAACTAGACAAG  650

seq1  CACGGCTACCGCTCTGAAGCCCAGTGTTGGGAAGGCAGAGGCAGGCAATC  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACGGCTACCGCTCTGAAGCCCAGTGTTGGGAAGGCAGAGGCAGGCAATC  700

seq1  TCCTGGCAAACTGGCTGGACAAGATGAGCTGGCATTAGCAAGCTCCAGAT  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCTGGCAAACTGGCTGGACAAGATGAGCTGGCATTAGCAAGCTCCAGAT  750

seq1  TCAGCAAATGACAATGCCCCAACAAATAAATTAGAGAACAATCGAGAAAG  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCAGCAAATGACAATGCCCCAACAAATAAATTAGAGAACAATCGAGAAAG  800

seq1  ATACCTGATACCTACTGTGTACCTGTACACAGGTGCACACATGTCTATGC  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATACCTGATACCTACTGTGTACCTGTACACAGGTGCACACATGTCTATGC  850

seq1  ACTCCCACAAATACATCCACACTTGTGCAAACATGCACACCCATATTCTC  900
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTCCCACAAATACATCCACACTTGTGCAAACATGCACACCCATATTCTC  900

seq1  AGCATATACATAGTCCAAAGATAGAAAGGGAAATACAGGATTGAGATTTC  950
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGCATATACATAGTCCAAAGATAGAAAGGGAAATACAGGATTGAGATTTC  950

seq1  ACTTTGCAAGTAACAAAGTTATTCATCCATCGACACAAAACCATGGTAGC  1000
      ||||||||||||||||||||| |||| ||||||||||||| |||||||||
seq2  ACTTTGCAAGTAACAAAGTTA-TCAT-CATCGACACAAAA-CATGGTAGC  997

seq1  TCCTCCAAAAAGGTAAGAACTATTTTCCCCCTAGAATA-TTTATGATTCT  1049
      | |||   ||| |||   |||||||| ||||||||||| |||||||||||
seq2  T-CTC---AAAAGTA--GACTATTTT-CCCCTAGAATATTTTATGATTCT  1040

seq1  GGCCAGTAATTTATTTGAGAGGTATAGGTTAGCCCCAATTACAAATTTAC  1099
      |  |||||  |||||||||| ||||||  ||||||||  |||||| ||||
seq2  G--CAGTA--TTATTTGAGAAGTATAG--TAGCCCCA--TACAAA-TTAC  1081

seq1  AGATGGCAATCATTTCGTGAAGTTTTT  1126
      |||| || ||||||   ||||||||||
seq2  AGATTGC-ATCATT--CTGAAGTTTTT  1105


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