BAC Information

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BAC

Clone NameB6Ng01-241J06
Chromosome16 (Build37)
Map Location 6,975,545 - 7,076,692
singlet/doubletdoublet
Overlap geneA2bp1
Upstream geneLOC100042445
Downstream genenone
LinkOpen Mouse BAC browser

no map image available.



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-241J06.bB6Ng01-241J06.g
ACCGA051457GA051458
length7651,032
definitionB6Ng01-241J06.b B6Ng01-241J06.g
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(6,975,545 - 6,976,309)(7,075,655 - 7,076,692)
sequence
gaattctccttcctagtgtgtgcttcatgaacaggtgaatgtaaggtgga
caaagttctgtcagatacatcgaaatctgtggatcatgagtgtgtgcatt
aggaatcagcattcactcaatgccacatattttcaaagcaccttaaaatg
atggcattccatttaagggagaggagagttccattctgagaattgtggtc
ccatttaaggaatgggttacacaccaagtcatccacacgctcaaggttgc
taaaccatagccattagcatagcatcacctggcagggcaggcagtgggag
gtgggactgtgcatcgagtgtgtgctggagaaagggctggctttccctga
gtagggaagtatagatagggcaggtgtggcagtacagtctcggggaaaag
gctttgcttctgagttgtagccatcatagataatcagtggctctggggga
gctccaactacactgcctgtgcaatctgatgcaaagttgagcttctttcc
ccctttgagttaatgagaagctttgtttgggaatgaatgagcccctgtgt
ttatgcaccgggtgctattttctcctgtgactttaagaagccctttatct
aggtgtggcttcacactcaaggggctgagacaggtagataggttatgagt
ttgagggaggcttggtaaaagaaaagtaacgggagacatagggaaggaaa
agaaaaataagggagacgagagaaaagaatggggacaaaggagggaggaa
ggaatggggaagtaa

gaattcttgtaaaacactcctccaacacaaggagtttgcttcaaaataca
cagaaactagggttggtgggtagagcagagagacatgactcagcagattc
tgccacctgcagctatggtgagtggaaatgtaagaagacacttggcctat
ggggacactactatctcattggtaaagaatgttgaggagtgaaagacact
ccacagatggacatttaccaactagatcaatggttctcaacctgtggttt
gcaacccttagggggttaaacaaccttttcacaggggtcctccaagacca
ttgaaaaagacccttacatactttatgattcataaaggtagcaacattgc
aattgtgaagtagcaatgaaaataatgttatggttggggtcatcacagca
ctaaaagagccgcagcttcaggaaggttgagaaccactgctctagatcca
caggagctcattcgtccaggaacaaggtcagggtggggaagacctgtttc
tgaggctcctccagctcctttgccttacatctcgcccttttggaattgga
acgccatcacatttcactgagcaagtaagatggcaaaaacaccaaggagg
ctctttcagcgtgacaaatactctggagagtgccaactggtgtttgtgca
gctccagttggtaactggccacttaaccggcatgggctcctccctctctc
tgttcccaatgcttgtgtctgctggatctcccagtaaaagagaaggtgct
cactcagcaaaccccagtctaaatttggactccaccactggtattctttg
ggacctcgtatcttattccctctttctgagtccacattctccacatgcaa
aagatgagttaataaaaggcagtggctcccaaactgagaactctggagtc
acctgtaattcataatttgcttttttgttttgtgctgttttcggtttcca
gaaagtactcactggaaacagtgattatgtaagccttcagaaagagtctg
gggcacacccaggacactacacaacgcataaa
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr16_6975545_6976309
seq2: B6Ng01-241J06.b_46_810

seq1  GAATTCTCCTTCCTAGTGTGTGCTTCATGAACAGGTGAATGTAAGGTGGA  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCTCCTTCCTAGTGTGTGCTTCATGAACAGGTGAATGTAAGGTGGA  50

seq1  CAAAGTTCTGTCAGATACATCGAAATCTGTGGATCATGAGTGTGTGCATT  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAAAGTTCTGTCAGATACATCGAAATCTGTGGATCATGAGTGTGTGCATT  100

seq1  AGGAATCAGCATTCACTCAATGCCACATATTTTCAAAGCACCTTAAAATG  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGAATCAGCATTCACTCAATGCCACATATTTTCAAAGCACCTTAAAATG  150

seq1  ATGGCATTCCATTTAAGGGAGAGGAGAGTTCCATTCTGAGAATTGTGGTC  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGGCATTCCATTTAAGGGAGAGGAGAGTTCCATTCTGAGAATTGTGGTC  200

seq1  CCATTTAAGGAATGGGTTACACACCAAGTCATCCACACGCTCAAGGTTGC  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCATTTAAGGAATGGGTTACACACCAAGTCATCCACACGCTCAAGGTTGC  250

seq1  TAAACCATAGCCATTAGCATAGCATCACCTGGCAGGGCAGGCAGTGGGAG  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAAACCATAGCCATTAGCATAGCATCACCTGGCAGGGCAGGCAGTGGGAG  300

seq1  GTGGGACTGTGCATCGAGTGTGTGCTGGAGAAAGGGCTGGCTTTCCCTGA  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTGGGACTGTGCATCGAGTGTGTGCTGGAGAAAGGGCTGGCTTTCCCTGA  350

seq1  GTAGGGAAGTATAGATAGGGCAGGTGTGGCAGTACAGTCTCGGGGAAAAG  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTAGGGAAGTATAGATAGGGCAGGTGTGGCAGTACAGTCTCGGGGAAAAG  400

seq1  GCTTTGCTTCTGAGTTGTAGCCATCATAGATAATCAGTGGCTCTGGGGGA  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCTTTGCTTCTGAGTTGTAGCCATCATAGATAATCAGTGGCTCTGGGGGA  450

seq1  GCTCCAACTACACTGCCTGTGCAATCTGATGCAAAGTTGAGCTTCTTTCC  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCTCCAACTACACTGCCTGTGCAATCTGATGCAAAGTTGAGCTTCTTTCC  500

seq1  CCCTTTGAGTTAATGAGAAGCTTTGTTTGGGAATGAATGAGCCCCTGTGT  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCCTTTGAGTTAATGAGAAGCTTTGTTTGGGAATGAATGAGCCCCTGTGT  550

seq1  TTATGCACCGGGTGCTATTTTCTCCTGTGACTTTAAGAAGCCCTTTATCT  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTATGCACCGGGTGCTATTTTCTCCTGTGACTTTAAGAAGCCCTTTATCT  600

seq1  AGGTGTGGCTTCACACTCAAGGGGCTGAGACAGGTAGATAGGTTATGAGT  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGTGTGGCTTCACACTCAAGGGGCTGAGACAGGTAGATAGGTTATGAGT  650

seq1  TTGAGGGAGGCTTGGTAAAAGAAAAGTAACGGGAGACATAGGGAAGGAAA  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGAGGGAGGCTTGGTAAAAGAAAAGTAACGGGAGACATAGGGAAGGAAA  700

seq1  AGAAAAATAAGGGAGAAGAGAGAAAAGAATGGGGACAAAGGAGGGAGGAA  750
      |||||||||||||||| |||||||||||||||||||||||||||||||||
seq2  AGAAAAATAAGGGAGACGAGAGAAAAGAATGGGGACAAAGGAGGGAGGAA  750

seq1  GGAATGGGGAAGTAA  765
      |||||||||||||||
seq2  GGAATGGGGAAGTAA  765


seq1: chr16_7075655_7076692
seq2: B6Ng01-241J06.g_68_1099 (reverse)

seq1  TTTATGCGTTTGGTGTTGGTGT-CTGGGTGTTGCCCCAGACTC-TTCTGA  48
      ||||||||||  ||| | |||| ||||||| |||||||||||| ||||||
seq2  TTTATGCGTT--GTG-TAGTGTCCTGGGTG-TGCCCCAGACTCTTTCTGA  46

seq1  AGGCTTTACATAATCACTGTTTCCAGTGGAGTACCTTTCTGGAAACCGAA  98
      |||| |||||||||||||||||||||| ||||| ||||||||||||||||
seq2  AGGC-TTACATAATCACTGTTTCCAGT-GAGTA-CTTTCTGGAAACCGAA  93

seq1  AACAGCACAAAACAAAAAAGCAAATTATGAATTACAGGTGACTCCAGAGT  148
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACAGCACAAAACAAAAAAGCAAATTATGAATTACAGGTGACTCCAGAGT  143

seq1  TCTCAGTTTGGGAGCCACTGCCTTTTATTAACTCATCTTTTGCATGTGGA  198
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTCAGTTTGGGAGCCACTGCCTTTTATTAACTCATCTTTTGCATGTGGA  193

seq1  GAATGTGGACTCAGAAAGAGGGAATAAGATTACGAGGTCCCAAAGAATAC  248
      ||||||||||||||||||||||||||||| ||||||||||||||||||||
seq2  GAATGTGGACTCAGAAAGAGGGAATAAGA-TACGAGGTCCCAAAGAATAC  242

seq1  CAGTGGTGGAGTCCAAATTTAGACTGGGGTTTGCTGAGTGAGCACCTTCT  298
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGTGGTGGAGTCCAAATTTAGACTGGGGTTTGCTGAGTGAGCACCTTCT  292

seq1  CTTTTACTGGGAGATCCAGCAGACACAAGCATTGGGAACAGAGAGAGGGA  348
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTTTACTGGGAGATCCAGCAGACACAAGCATTGGGAACAGAGAGAGGGA  342

seq1  GGAGCCCATGCCGGTTAAGTGGCCAGTTACCAACTGGAGCTGCACAAACA  398
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGAGCCCATGCCGGTTAAGTGGCCAGTTACCAACTGGAGCTGCACAAACA  392

seq1  CCAGTTGGCACTCTCCAGAGTATTTGTCACGCTGAAAGAGCCTCCTTGGT  448
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCAGTTGGCACTCTCCAGAGTATTTGTCACGCTGAAAGAGCCTCCTTGGT  442

seq1  GTTTTTGCCATCTTACTTGCTCAGTGAAATGTGATGGCGTTCCAATTCCA  498
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTTTTGCCATCTTACTTGCTCAGTGAAATGTGATGGCGTTCCAATTCCA  492

seq1  AAAGGGCGAGATGTAAGGCAAAGGAGCTGGAGGAGCCTCAGAAACAGGTC  548
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAGGGCGAGATGTAAGGCAAAGGAGCTGGAGGAGCCTCAGAAACAGGTC  542

seq1  TTCCCCACCCTGACCTTGTTCCTGGACGAATGAGCTCCTGTGGATCTAGA  598
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCCCCACCCTGACCTTGTTCCTGGACGAATGAGCTCCTGTGGATCTAGA  592

seq1  GCAGTGGTTCTCAACCTTCCTGAAGCTGCGGCTCTTTTAGTGCTGTGATG  648
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCAGTGGTTCTCAACCTTCCTGAAGCTGCGGCTCTTTTAGTGCTGTGATG  642

seq1  ACCCCAACCATAACATTATTTTCATTGCTACTTCACAATTGCAATGTTGC  698
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACCCCAACCATAACATTATTTTCATTGCTACTTCACAATTGCAATGTTGC  692

seq1  TACCTTTATGAATCATAAAGTATGTAAGGGTCTTTTTCAATGGTCTTGGA  748
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TACCTTTATGAATCATAAAGTATGTAAGGGTCTTTTTCAATGGTCTTGGA  742

seq1  GGACCCCTGTGAAAAGGTTGTTTAACCCCCTAAGGGTTGCAAACCACAGG  798
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGACCCCTGTGAAAAGGTTGTTTAACCCCCTAAGGGTTGCAAACCACAGG  792

seq1  TTGAGAACCATTGATCTAGTTGGTAAATGTCCATCTGTGGAGTGTCTTTC  848
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGAGAACCATTGATCTAGTTGGTAAATGTCCATCTGTGGAGTGTCTTTC  842

seq1  ACTCCTCAACATTCTTTACCAATGAGATAGTAGTGTCCCCATAGGCCAAG  898
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTCCTCAACATTCTTTACCAATGAGATAGTAGTGTCCCCATAGGCCAAG  892

seq1  TGTCTTCTTACATTTCCACTCACCATAGCTGCAGGTGGCAGAATCTGCTG  948
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTCTTCTTACATTTCCACTCACCATAGCTGCAGGTGGCAGAATCTGCTG  942

seq1  AGTCATGTCTCTCTGCTCTACCCACCAACCCTAGTTTCTGTGTATTTTGA  998
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTCATGTCTCTCTGCTCTACCCACCAACCCTAGTTTCTGTGTATTTTGA  992

seq1  AGCAAACTCCTTGTGTTGGAGGAGTGTTTTACAAGAATTC  1038
      ||||||||||||||||||||||||||||||||||||||||
seq2  AGCAAACTCCTTGTGTTGGAGGAGTGTTTTACAAGAATTC  1032


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