BAC Information

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BAC

Clone NameB6Ng01-247A07
Chromosome16 (Build37)
Map Location 54,156,317 - 54,157,307
singlet/doubletsinglet
Overlap genenone
Upstream geneLOC433027
Downstream geneLOC100043442, LOC100043449, LOC667927, LOC436421
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-247A07.b
ACCGA055470
length1,002
definitionB6Ng01-247A07.b
singlet/doubletsinglet---
BLAST hituniqueno hit data
sequence
gaattctcattagaatataagaatataatctagaacatttatttaagagg
tacaattccaatattgtgagatagtcttcattatatatgatgctatactt
gctatatatttatgactaataattgttttccaaaaactatgaattcacac
agtatcatctaacaaccatttcctcaaaattttagtttaattcttagtga
gacttgtatactcaaatttggaggtttacatctaaagaagtcatgagtta
tgtataagtaactccaaagaagaaaaatctgtgaactgttttatgaataa
cggggaagctactgcaattaacctcaataatatactttcctagacatgaa
ctaaacaaggtcttcaccaaccaacggaatttctactgtgatagtggtaa
atcacactggaccacaccgctggagaaagctactgaaaactaaagtcttc
tgaaagaaaaaaaaagattatgctttctcatgaacaaacaacaataaatg
cttaattaatgctaaggtgtcagtcttgaaatcacatacatatgagcaca
ctaaactgaatcgttaagttgcatttatatttttacacaattataaactt
gtgtgtgtttctatgtatctgtgtgtatttctgtgtgtgtgtttctctat
gtgttgaaaacagagactgagaaatgcatttgaaaagaactgaatgaatg
agatgaggagaactgcccctgccccaagtccgttgttgtactgtgggaaa
gcaacccttgcttgcttgtgggagttgagagtaagccaacccctaggaga
acaatctggaagatcccaatacacatttggatgcccatatactgctgtta
actaaaaaaaaaacaccctcttcactcgtcatctctcaccacctgtgtca
agtgaggagacattgcacctgcgtcacgacgataaagagagtttttccca
tccctctccccccgctgttgccctcagactgaactggcccctgcacgaca
gc
quality valuesOpen.




Alignment Information

BAC End 1BAC End 2
seq1: chr16_54156317_54157307
seq2: B6Ng01-247A07.b_43_1044

seq1  GAATTCAAATTAGTATATAAGAATATAATCTAAAAACATTTATTTAAGAT  50
      ||||||  ||||| ||||||||||||||||| | ||||||||||||||| 
seq2  GAATTCTCATTAGAATATAAGAATATAATCT-AGAACATTTATTTAAGAG  49

seq1  GTACAATAACAATATTGTGAGATAGTCTTCATTATATATAATGCTATACA  100
      |||||||  |||||||||||||||||||||||||||||| ||||||||| 
seq2  GTACAATTCCAATATTGTGAGATAGTCTTCATTATATATGATGCTATACT  99

seq1  TGCTATATATTTATCAGTAATAATTGTTTAGCAAAAACTATGAATTCACA  150
      |||||||||||||| | ||||||||||||  |||||||||||||||||||
seq2  TGCTATATATTTATGACTAATAATTGTTTTCCAAAAACTATGAATTCACA  149

seq1  CAGTATCATCTAACTACCATTTCCTCAAAATTTTAGTTTAATTCTTAGTG  200
      |||||||||||||| |||||||||||||||||||||||||||||||||||
seq2  CAGTATCATCTAACAACCATTTCCTCAAAATTTTAGTTTAATTCTTAGTG  199

seq1  AGACTTGTATACTCAGATTTAGAGGTTTACATCTAAGGAAGTCAGGAATT  250
      ||||||||||||||| |||| ||||||||||||||| ||||||| || ||
seq2  AGACTTGTATACTCAAATTTGGAGGTTTACATCTAAAGAAGTCATGAGTT  249

seq1  ATGTAAAAGTAACACGAAAAAAGAAAAATCTGTGAACTGTTTTATAAATA  300
      ||||| ||||||| | ||| ||||||||||||||||||||||||| ||||
seq2  ATGTATAAGTAACTCCAAAGAAGAAAAATCTGTGAACTGTTTTATGAATA  299

seq1  ACAGGGAAGCTACACCAATTAACCTCAATAATATACTTTCCTAGACATGA  350
      || ||||||||||  |||||||||||||||||||||||||||||||||||
seq2  ACGGGGAAGCTACTGCAATTAACCTCAATAATATACTTTCCTAGACATGA  349

seq1  ACTAAACAAGGTCTTCACCAACCAACGGAATTTCTACTGTGATAGTGGTA  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTAAACAAGGTCTTCACCAACCAACGGAATTTCTACTGTGATAGTGGTA  399

seq1  AATCACACTGGACCACACCACTGGAGAAAGCTACAGAAAACTAAAGTCTT  450
      ||||||||||||||||||| |||||||||||||| |||||||||||||||
seq2  AATCACACTGGACCACACCGCTGGAGAAAGCTACTGAAAACTAAAGTCTT  449

seq1  CTGAAAGAAAAAAAAAAATTAGTCTTTCTCAGGAACAAGCAGCAATAAAT  500
      |||||||||||||||| ||||  |||||||| |||||| || ||||||||
seq2  CTGAAAGAAAAAAAAAGATTATGCTTTCTCATGAACAAACAACAATAAAT  499

seq1  GCTTAATTAATGCTAAGGTGTCAGTCTTGAAATCACATACATATGAGCAC  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCTTAATTAATGCTAAGGTGTCAGTCTTGAAATCACATACATATGAGCAC  549

seq1  ACTAAACTGAATCGTTAAGTTGCATTTATATTTTTACACAATTATAAACT  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTAAACTGAATCGTTAAGTTGCATTTATATTTTTACACAATTATAAACT  599

seq1  TGTGTGTGTTTCTATGTATCTGTGTGTATTTCTGTGTGTGTGTTTCTCTA  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTGTGTGTTTCTATGTATCTGTGTGTATTTCTGTGTGTGTGTTTCTCTA  649

seq1  TGTGTTTAAAACA-ATACCAAGAAATGCATTTGAAAAGAACAAAATGAAT  699
      |||||| |||||| | ||  |||||||||||||||||||||  |||||||
seq2  TGTGTTGAAAACAGAGACTGAGAAATGCATTTGAAAAGAACTGAATGAAT  699

seq1  GAGATGAGGAGAACTGCCCCTGCCCCAAGTCAGTTGTTGTACT-TGGGAA  748
      ||||||||||||||||||||||||||||||| ||||||||||| ||||||
seq2  GAGATGAGGAGAACTGCCCCTGCCCCAAGTCCGTTGTTGTACTGTGGGAA  749

seq1  AGCAACCCTTGC-ACATTGTGGGAGTTGAGAGTAAGCCAACACCTAGGAT  797
      ||||||||||||    ||||||||||||||||||||||||| ||||||| 
seq2  AGCAACCCTTGCTTGCTTGTGGGAGTTGAGAGTAAGCCAACCCCTAGGAG  799

seq1  AACAATCTGGAAGATCCCTTTACACATTTTGTCTCCCATATAGTGATGTG  847
      ||||||||||||||||||  ||||||||| |   |||||||| || ||| 
seq2  AACAATCTGGAAGATCCCAATACACATTTGGATGCCCATATACTGCTGTT  849

seq1  AAC-AAAGAAGAGACACCCTCTTCCCTCATCATCTCTCACCACCTGTGTC  896
      ||| ||| || | ||||||||||| ||| |||||||||||||||||||||
seq2  AACTAAAAAAAAAACACCCTCTTCACTCGTCATCTCTCACCACCTGTGTC  899

seq1  AAGTG-GGAGACATTG-ACCTGGGTCACGAC-AGAAAGAGAGTTTT--CC  941
      ||||| |||||||||| ||||| |||||||| | ||||||||||||  ||
seq2  AAGTGAGGAGACATTGCACCTGCGTCACGACGATAAAGAGAGTTTTTCCC  949

seq1  CTTCCTCT-CCCCAGCTGTAGCACTCAGA-TGAACTGG-CCCTGCACGTC  988
       | ||||| |||| ||||| || |||||| |||||||| ||||||||| |
seq2  ATCCCTCTCCCCCCGCTGTTGCCCTCAGACTGAACTGGCCCCTGCACGAC  999

seq1  AGC  991
      |||
seq2  AGC  1002